RNA–Protein interactions for RNA: ENST00000476652.2

CEP78-208, Transcript of centrosomal protein 78, human

TSL 3

Gene CEP78, Length 634 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEP78-208	ENST00000476652	ZFYVE9	O95405	1425 aa		32.48	■■■□□ 2.79
CEP78-208	ENST00000476652	NWD1	Q149M9	1564 aa		32.47	■■■□□ 2.79
CEP78-208	ENST00000476652	SOCS7	O14512	581 aa		32.46	■■■□□ 2.79
CEP78-208	ENST00000476652	CHD2	O14647	1828 aa	Known RBP	32.43	■■■□□ 2.78
CEP78-208	ENST00000476652	KCNA6	P17658	529 aa		32.43	■■■□□ 2.78
CEP78-208	ENST00000476652	RIMS2	Q9UQ26	1411 aa		32.43	■■■□□ 2.78
CEP78-208	ENST00000476652	SENP3	Q9H4L4	574 aa	Predicted RBP	32.41	■■■□□ 2.78
CEP78-208	ENST00000476652	NUP155	O75694	1391 aa		32.41	■■■□□ 2.78
CEP78-208	ENST00000476652	TMEM94	Q12767	1356 aa		32.41	■■■□□ 2.78
CEP78-208	ENST00000476652	NKTR	P30414	1462 aa	Known RBP	32.41	■■■□□ 2.78
CEP78-208	ENST00000476652	BCAN	Q96GW7	911 aa		32.4	■■■□□ 2.78
CEP78-208	ENST00000476652	PLEKHG1	Q9ULL1	1385 aa		32.4	■■■□□ 2.78
CEP78-208	ENST00000476652	SPHKAP	Q2M3C7	1700 aa		32.37	■■■□□ 2.77
CEP78-208	ENST00000476652	PPP1R15A	O75807	674 aa	Predicted RBP	32.35	■■■□□ 2.77
CEP78-208	ENST00000476652	CHGA	P10645	457 aa	Known RBP	32.35	■■■□□ 2.77
CEP78-208	ENST00000476652	PROSER2	Q86WR7	435 aa	Predicted RBP	32.35	■■■□□ 2.77
CEP78-208	ENST00000476652	HDGF	P51858	240 aa	Known RBP	32.34	■■■□□ 2.77
CEP78-208	ENST00000476652	RBM33	Q96EV2	1170 aa	Known RBP	32.32	■■■□□ 2.76
CEP78-208	ENST00000476652	RRBP1	Q9P2E9	1410 aa	Known RBP	32.32	■■■□□ 2.76
CEP78-208	ENST00000476652	ROBO1	Q9Y6N7	1651 aa		32.31	■■■□□ 2.76
CEP78-208	ENST00000476652	FAM135B	Q49AJ0	1406 aa		32.28	■■■□□ 2.76
CEP78-208	ENST00000476652	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.28	■■■□□ 2.76
CEP78-208	ENST00000476652	DIP2A	Q14689	1571 aa		32.27	■■■□□ 2.76
CEP78-208	ENST00000476652	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.26	■■■□□ 2.75
CEP78-208	ENST00000476652	ADAMTS13	Q76LX8	1427 aa		32.25	■■■□□ 2.75
CEP78-208	ENST00000476652	TBX22	Q9Y458	520 aa		32.23	■■■□□ 2.75
CEP78-208	ENST00000476652	MSH6	P52701	1360 aa		32.22	■■■□□ 2.75
CEP78-208	ENST00000476652	PHF23	Q9BUL5	403 aa	Predicted RBP	32.2	■■■□□ 2.75
CEP78-208	ENST00000476652	NAIP	Q13075	1403 aa		32.18	■■■□□ 2.74
CEP78-208	ENST00000476652	TRPM2	O94759	1503 aa		32.17	■■■□□ 2.74
CEP78-208	ENST00000476652	NRXN3	Q9Y4C0	1643 aa		32.17	■■■□□ 2.74
CEP78-208	ENST00000476652	CLTCL1	P53675	1640 aa		32.16	■■■□□ 2.74
CEP78-208	ENST00000476652	KIF1B	O60333	1816 aa		32.15	■■■□□ 2.74
CEP78-208	ENST00000476652	PIK3R4	Q99570	1358 aa		32.15	■■■□□ 2.74
CEP78-208	ENST00000476652	PHLPP1	O60346	1717 aa		32.13	■■■□□ 2.73
CEP78-208	ENST00000476652	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.13	■■■□□ 2.73
CEP78-208	ENST00000476652	NCOA3	Q9Y6Q9	1424 aa		32.11	■■■□□ 2.73
CEP78-208	ENST00000476652	SETBP1	Q9Y6X0	1596 aa		32.11	■■■□□ 2.73
CEP78-208	ENST00000476652	SLAIN2	Q9P270	581 aa		32.09	■■■□□ 2.73
CEP78-208	ENST00000476652	XRN1	Q8IZH2	1706 aa	Known RBP	32.08	■■■□□ 2.73
CEP78-208	ENST00000476652	PTPRU	Q92729	1446 aa		32.07	■■■□□ 2.72
CEP78-208	ENST00000476652	HFM1	A2PYH4	1435 aa		32.06	■■■□□ 2.72
CEP78-208	ENST00000476652	NEXMIF	Q5QGS0	1516 aa		32.05	■■■□□ 2.72
CEP78-208	ENST00000476652	ZNF326	Q5BKZ1	582 aa	Known RBP	32.05	■■■□□ 2.72
CEP78-208	ENST00000476652	C14orf37	Q86TY3	774 aa		32.04	■■■□□ 2.72
CEP78-208	ENST00000476652	AMOTL2	Q9Y2J4	779 aa		32.02	■■■□□ 2.72
CEP78-208	ENST00000476652	COL16A1	Q07092	1604 aa	Predicted RBP	32	■■■□□ 2.71
CEP78-208	ENST00000476652	RGS17	Q9UGC6	210 aa	Predicted RBP	31.98	■■■□□ 2.71
CEP78-208	ENST00000476652	TRIM52	Q96A61	297 aa		31.97	■■■□□ 2.71
CEP78-208	ENST00000476652	C19orf44	Q9H6X5	657 aa		31.97	■■■□□ 2.71
CEP78-208	ENST00000476652	CADPS2	Q86UW7	1296 aa		31.95	■■■□□ 2.71
CEP78-208	ENST00000476652	MET	P08581	1390 aa		31.94	■■■□□ 2.7
CEP78-208	ENST00000476652	ATF3	P18847	181 aa		31.93	■■■□□ 2.7
CEP78-208	ENST00000476652	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.93	■■■□□ 2.7
CEP78-208	ENST00000476652	SETD1A	O15047	1707 aa	Known RBP	31.92	■■■□□ 2.7
CEP78-208	ENST00000476652	JCAD	Q9P266	1359 aa		31.91	■■■□□ 2.7
CEP78-208	ENST00000476652	PPL	O60437	1756 aa		31.9	■■■□□ 2.7
CEP78-208	ENST00000476652	SLC4A1AP	Q9BWU0	796 aa	Known RBP	31.89	■■■□□ 2.7
CEP78-208	ENST00000476652	DCC	P43146	1447 aa		31.89	■■■□□ 2.7
CEP78-208	ENST00000476652	NALCN	Q8IZF0	1738 aa		31.89	■■■□□ 2.69
CEP78-208	ENST00000476652	SHPRH	Q149N8	1683 aa		31.86	■■■□□ 2.69
CEP78-208	ENST00000476652	ASXL1	Q8IXJ9	1541 aa		31.8	■■■□□ 2.68
CEP78-208	ENST00000476652	NHSL1	Q5SYE7	1610 aa		31.8	■■■□□ 2.68
CEP78-208	ENST00000476652	BRINP3	Q76B58	766 aa		31.8	■■■□□ 2.68
CEP78-208	ENST00000476652	MST1R	Q04912	1400 aa		31.8	■■■□□ 2.68
CEP78-208	ENST00000476652	ADGRL3	Q9HAR2	1447 aa		31.8	■■■□□ 2.68
CEP78-208	ENST00000476652	POTEA	Q6S8J7	498 aa		31.79	■■■□□ 2.68
CEP78-208	ENST00000476652	VGF	O15240	615 aa	Predicted RBP	31.78	■■■□□ 2.68
CEP78-208	ENST00000476652	LRP6	O75581	1613 aa		31.78	■■■□□ 2.68
CEP78-208	ENST00000476652	RPGRIP1L	Q68CZ1	1315 aa		31.76	■■■□□ 2.68
CEP78-208	ENST00000476652	FOXD1	Q16676	465 aa		31.76	■■■□□ 2.67
CEP78-208	ENST00000476652	SPATA31A6	Q5VVP1	1343 aa		31.75	■■■□□ 2.67
CEP78-208	ENST00000476652	IFT172	Q9UG01	1749 aa		31.74	■■■□□ 2.67
CEP78-208	ENST00000476652	PTCH1	Q13635	1447 aa		31.74	■■■□□ 2.67
CEP78-208	ENST00000476652	CCDC144A	A2RUR9	1427 aa		31.69	■■■□□ 2.66
CEP78-208	ENST00000476652	PRAG1	Q86YV5	1406 aa		31.68	■■■□□ 2.66
CEP78-208	ENST00000476652	ROBO2	Q9HCK4	1378 aa		31.68	■■■□□ 2.66
CEP78-208	ENST00000476652	MPHOSPH9	Q99550	1183 aa		31.66	■■■□□ 2.66
CEP78-208	ENST00000476652	SETD5	Q9C0A6	1442 aa		31.65	■■■□□ 2.66
CEP78-208	ENST00000476652	SPATA31E1	Q6ZUB1	1445 aa		31.64	■■■□□ 2.66
CEP78-208	ENST00000476652	MEX3C	Q5U5Q3	659 aa	Known RBP	31.63	■■■□□ 2.65
CEP78-208	ENST00000476652	C1orf167	Q5SNV9	1468 aa		31.62	■■■□□ 2.65
CEP78-208	ENST00000476652	LAMC1	P11047	1609 aa		31.61	■■■□□ 2.65
CEP78-208	ENST00000476652	ADGRF5	Q8IZF2	1346 aa		31.59	■■■□□ 2.65
CEP78-208	ENST00000476652	DDX17	Q92841	729 aa	Known RBP	31.59	■■■□□ 2.65
CEP78-208	ENST00000476652	RGL3	Q3MIN7	710 aa		31.58	■■■□□ 2.65
CEP78-208	ENST00000476652	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.56	■■■□□ 2.64
CEP78-208	ENST00000476652	NUTM2E	B1AL46	878 aa	Predicted RBP	31.56	■■■□□ 2.64
CEP78-208	ENST00000476652	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.56	■■■□□ 2.64
CEP78-208	ENST00000476652	KNDC1	Q76NI1	1749 aa		31.55	■■■□□ 2.64
CEP78-208	ENST00000476652	LRRC59	Q96AG4	307 aa	Known RBP	31.55	■■■□□ 2.64
CEP78-208	ENST00000476652	ANKRD30B	Q9BXX2	1392 aa		31.55	■■■□□ 2.64
CEP78-208	ENST00000476652	CDC42BPG	Q6DT37	1551 aa		31.53	■■■□□ 2.64
CEP78-208	ENST00000476652	ZNF772	Q68DY9	489 aa	Predicted RBP	31.53	■■■□□ 2.64
CEP78-208	ENST00000476652	PNPLA6	Q8IY17	1366 aa		31.51	■■■□□ 2.63
CEP78-208	ENST00000476652	PIK3C2G	O75747	1445 aa		31.49	■■■□□ 2.63
CEP78-208	ENST00000476652	ORAI2	Q96SN7	254 aa		31.49	■■■□□ 2.63
CEP78-208	ENST00000476652	TECPR2	O15040	1411 aa		31.49	■■■□□ 2.63
CEP78-208	ENST00000476652	ACIN1	Q9UKV3	1341 aa	Known RBP	31.49	■■■□□ 2.63
CEP78-208	ENST00000476652	LRPPRC	P42704	1394 aa	Known RBP	31.44	■■■□□ 2.62

Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms