RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 RIMS2Q9UQ26 1411 aa16.34■□□□□ 0.21
SEC13-214ENST00000476597 STRCP1A6NGW2 1772 aa16.33■□□□□ 0.21
SEC13-214ENST00000476597 PPP1R15AO75807 674 aaPredicted RBP16.33■□□□□ 0.2
SEC13-214ENST00000476597 PLEKHG1Q9ULL1 1385 aa16.33■□□□□ 0.2
SEC13-214ENST00000476597 GCC2Q8IWJ2 1684 aa16.32■□□□□ 0.2
SEC13-214ENST00000476597 TBX22Q9Y458 520 aa16.32■□□□□ 0.2
SEC13-214ENST00000476597 ALKQ9UM73 1620 aa16.31■□□□□ 0.2
SEC13-214ENST00000476597 PROSER2Q86WR7 435 aaPredicted RBP16.31■□□□□ 0.2
SEC13-214ENST00000476597 SENP3Q9H4L4 574 aaPredicted RBP16.31■□□□□ 0.2
SEC13-214ENST00000476597 E9PCH4 1651 aa16.3■□□□□ 0.2
SEC13-214ENST00000476597 TMEM94Q12767 1356 aa16.3■□□□□ 0.2
SEC13-214ENST00000476597 NUTM2DQ5VT03 806 aaPredicted RBP16.3■□□□□ 0.2
SEC13-214ENST00000476597 TMEM131LA2VDJ0 1609 aa16.3■□□□□ 0.2
SEC13-214ENST00000476597 HFM1A2PYH4 1435 aa16.28■□□□□ 0.2
SEC13-214ENST00000476597 ILDR2Q71H61 639 aa16.27■□□□□ 0.2
SEC13-214ENST00000476597 TRIM52Q96A61 297 aa16.27■□□□□ 0.2
SEC13-214ENST00000476597 RBM33Q96EV2 1170 aaKnown RBP16.27■□□□□ 0.2
SEC13-214ENST00000476597 ADAMTS13Q76LX8 1427 aa16.24■□□□□ 0.19
SEC13-214ENST00000476597 ZNF326Q5BKZ1 582 aaKnown RBP16.23■□□□□ 0.19
SEC13-214ENST00000476597 NKTRP30414 1462 aaKnown RBP16.22■□□□□ 0.19
SEC13-214ENST00000476597 SLC4A1APQ9BWU0 796 aaKnown RBP16.22■□□□□ 0.19
SEC13-214ENST00000476597 PIK3R4Q99570 1358 aa16.22■□□□□ 0.19
SEC13-214ENST00000476597 FAM135BQ49AJ0 1406 aa16.21■□□□□ 0.19
SEC13-214ENST00000476597 NWD1Q149M9 1564 aa16.21■□□□□ 0.18
SEC13-214ENST00000476597 AMOTL2Q9Y2J4 779 aa16.2■□□□□ 0.18
SEC13-214ENST00000476597 MYO5BQ9ULV0 1848 aa16.19■□□□□ 0.18
SEC13-214ENST00000476597 NCOA3Q9Y6Q9 1424 aa16.19■□□□□ 0.18
SEC13-214ENST00000476597 MSH6P52701 1360 aa16.18■□□□□ 0.18
SEC13-214ENST00000476597 XIRP1Q702N8 1843 aaKnown RBP16.18■□□□□ 0.18
SEC13-214ENST00000476597 SLAIN2Q9P270 581 aa16.18■□□□□ 0.18
SEC13-214ENST00000476597 TRPM2O94759 1503 aa16.17■□□□□ 0.18
SEC13-214ENST00000476597 DIP2AQ14689 1571 aa16.15■□□□□ 0.18
SEC13-214ENST00000476597 SPHKAPQ2M3C7 1700 aa16.15■□□□□ 0.18
SEC13-214ENST00000476597 PTPRUQ92729 1446 aa16.15■□□□□ 0.18
SEC13-214ENST00000476597 C19orf44Q9H6X5 657 aa16.15■□□□□ 0.18
SEC13-214ENST00000476597 VGFO15240 615 aaPredicted RBP16.14■□□□□ 0.17
SEC13-214ENST00000476597 FOXD1Q16676 465 aa16.14■□□□□ 0.17
SEC13-214ENST00000476597 C14orf37Q86TY3 774 aa16.14■□□□□ 0.17
SEC13-214ENST00000476597 MPHOSPH9Q99550 1183 aa16.14■□□□□ 0.17
SEC13-214ENST00000476597 CHD2O14647 1828 aaKnown RBP16.14■□□□□ 0.17
SEC13-214ENST00000476597 RPGRIP1LQ68CZ1 1315 aa16.14■□□□□ 0.17
SEC13-214ENST00000476597 CLTCL1P53675 1640 aa16.13■□□□□ 0.17
SEC13-214ENST00000476597 SOCS7O14512 581 aa16.13■□□□□ 0.17
SEC13-214ENST00000476597 METP08581 1390 aa16.13■□□□□ 0.17
SEC13-214ENST00000476597 CADPS2Q86UW7 1296 aa16.11■□□□□ 0.17
SEC13-214ENST00000476597 SETBP1Q9Y6X0 1596 aa16.11■□□□□ 0.17
SEC13-214ENST00000476597 ACIN1Q9UKV3 1341 aaKnown RBP16.11■□□□□ 0.17
SEC13-214ENST00000476597 ATF3P18847 181 aa16.1■□□□□ 0.17
SEC13-214ENST00000476597 NEXMIFQ5QGS0 1516 aa16.09■□□□□ 0.17
SEC13-214ENST00000476597 MED1Q15648 1581 aaPredicted RBP16.09■□□□□ 0.17
SEC13-214ENST00000476597 SETD5Q9C0A6 1442 aa16.08■□□□□ 0.16
SEC13-214ENST00000476597 NRXN3Q9Y4C0 1643 aa16.08■□□□□ 0.16
SEC13-214ENST00000476597 PHF23Q9BUL5 403 aaPredicted RBP16.07■□□□□ 0.16
SEC13-214ENST00000476597 ROBO1Q9Y6N7 1651 aa16.05■□□□□ 0.16
SEC13-214ENST00000476597 RGL3Q3MIN7 710 aa16.05■□□□□ 0.16
SEC13-214ENST00000476597 CCDC144AA2RUR9 1427 aa16.04■□□□□ 0.16
SEC13-214ENST00000476597 ADGRF5Q8IZF2 1346 aa16.02■□□□□ 0.16
SEC13-214ENST00000476597 BRINP3Q76B58 766 aa16.02■□□□□ 0.16
SEC13-214ENST00000476597 RGS17Q9UGC6 210 aaPredicted RBP16.02■□□□□ 0.16
SEC13-214ENST00000476597 KIF1BO60333 1816 aa16.02■□□□□ 0.16
SEC13-214ENST00000476597 DCCP43146 1447 aa16.02■□□□□ 0.15
SEC13-214ENST00000476597 SPATA31E1Q6ZUB1 1445 aa16.02■□□□□ 0.15
SEC13-214ENST00000476597 XRN1Q8IZH2 1706 aaKnown RBP16.01■□□□□ 0.15
SEC13-214ENST00000476597 RAB3GAP2Q9H2M9 1393 aa16■□□□□ 0.15
SEC13-214ENST00000476597 JCADQ9P266 1359 aa16■□□□□ 0.15
SEC13-214ENST00000476597 SIPA1L2Q9P2F8 1722 aaPredicted RBP16■□□□□ 0.15
SEC13-214ENST00000476597 ANKRD30BQ9BXX2 1392 aa15.99■□□□□ 0.15
SEC13-214ENST00000476597 ROBO2Q9HCK4 1378 aa15.99■□□□□ 0.15
SEC13-214ENST00000476597 HRCP23327 699 aa15.98■□□□□ 0.15
SEC13-214ENST00000476597 MST1RQ04912 1400 aa15.98■□□□□ 0.15
SEC13-214ENST00000476597 ADGRL3Q9HAR2 1447 aa15.98■□□□□ 0.15
SEC13-214ENST00000476597 PTCH1Q13635 1447 aa15.97■□□□□ 0.15
SEC13-214ENST00000476597 PRAG1Q86YV5 1406 aa15.96■□□□□ 0.15
SEC13-214ENST00000476597 SPATA31A6Q5VVP1 1343 aa15.94■□□□□ 0.14
SEC13-214ENST00000476597 AHDC1Q5TGY3 1603 aaPredicted RBP15.94■□□□□ 0.14
SEC13-214ENST00000476597 TMEM132EQ6IEE7 984 aa15.93■□□□□ 0.14
SEC13-214ENST00000476597 POTEAQ6S8J7 498 aa15.93■□□□□ 0.14
SEC13-214ENST00000476597 PHLPP1O60346 1717 aa15.93■□□□□ 0.14
SEC13-214ENST00000476597 COL16A1Q07092 1604 aaPredicted RBP15.93■□□□□ 0.14
SEC13-214ENST00000476597 PPLO60437 1756 aa15.92■□□□□ 0.14
SEC13-214ENST00000476597 LRRC59Q96AG4 307 aaKnown RBP15.92■□□□□ 0.14
SEC13-214ENST00000476597 C14orf93Q9H972 538 aaKnown RBP15.92■□□□□ 0.14
SEC13-214ENST00000476597 STK26Q9P289 416 aa15.92■□□□□ 0.14
SEC13-214ENST00000476597 SETD1AO15047 1707 aaKnown RBP15.91■□□□□ 0.14
SEC13-214ENST00000476597 LRPPRCP42704 1394 aaKnown RBP15.91■□□□□ 0.14
SEC13-214ENST00000476597 ABCC11Q96J66 1382 aa15.91■□□□□ 0.14
SEC13-214ENST00000476597 DDX17Q92841 729 aaKnown RBP15.91■□□□□ 0.14
SEC13-214ENST00000476597 C1orf167Q5SNV9 1468 aa15.91■□□□□ 0.14
SEC13-214ENST00000476597 ASXL1Q8IXJ9 1541 aa15.9■□□□□ 0.14
SEC13-214ENST00000476597 WAPLQ7Z5K2 1190 aa15.9■□□□□ 0.14
SEC13-214ENST00000476597 ORAI2Q96SN7 254 aa15.9■□□□□ 0.14
SEC13-214ENST00000476597 PIK3C2GO75747 1445 aa15.9■□□□□ 0.14
SEC13-214ENST00000476597 SIRT1Q96EB6 747 aa15.89■□□□□ 0.13
SEC13-214ENST00000476597 TECPR2O15040 1411 aa15.88■□□□□ 0.13
SEC13-214ENST00000476597 CFAP70Q5T0N1 1121 aa15.88■□□□□ 0.13
SEC13-214ENST00000476597 NRXN1Q9ULB1 1477 aa15.86■□□□□ 0.13
SEC13-214ENST00000476597 MEX3CQ5U5Q3 659 aaKnown RBP15.86■□□□□ 0.13
SEC13-214ENST00000476597 LRP6O75581 1613 aa15.86■□□□□ 0.13
SEC13-214ENST00000476597 YTHDC2Q9H6S0 1430 aaKnown RBP15.85■□□□□ 0.13
SEC13-214ENST00000476597 NALCNQ8IZF0 1738 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms