RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 RALGAPBQ86X10 1494 aa16.85■□□□□ 0.29
XPC-205ENST00000476581 FER1L4A9Z1Z3 1794 aa16.85■□□□□ 0.29
XPC-205ENST00000476581 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
XPC-205ENST00000476581 SPATA31D1Q6ZQQ2 1576 aa16.84■□□□□ 0.29
XPC-205ENST00000476581 ESF1Q9H501 851 aaKnown RBP16.83■□□□□ 0.29
XPC-205ENST00000476581 TMEM131LA2VDJ0 1609 aa16.83■□□□□ 0.28
XPC-205ENST00000476581 PPLO60437 1756 aa16.82■□□□□ 0.28
XPC-205ENST00000476581 C3P01024 1663 aa16.82■□□□□ 0.28
XPC-205ENST00000476581 CARD11Q9BXL7 1154 aa16.81■□□□□ 0.28
XPC-205ENST00000476581 ROCK2O75116 1388 aaKnown RBP16.81■□□□□ 0.28
XPC-205ENST00000476581 EIF4G2P78344 907 aaKnown RBP eCLIP16.8■□□□□ 0.28
XPC-205ENST00000476581 USP47Q96K76 1375 aa16.8■□□□□ 0.28
XPC-205ENST00000476581 NEURL4Q96JN8 1562 aa16.8■□□□□ 0.28
XPC-205ENST00000476581 NEXMIFQ5QGS0 1516 aa16.79■□□□□ 0.28
XPC-205ENST00000476581 CFAP70Q5T0N1 1121 aa16.79■□□□□ 0.28
XPC-205ENST00000476581 SLC52A1Q9NWF4 448 aa16.78■□□□□ 0.28
XPC-205ENST00000476581 RIMS1Q86UR5 1692 aaKnown RBP16.77■□□□□ 0.28
XPC-205ENST00000476581 WASHC2AQ641Q2 1341 aa16.76■□□□□ 0.27
XPC-205ENST00000476581 DDX10Q13206 875 aaKnown RBP16.76■□□□□ 0.27
XPC-205ENST00000476581 ST20-MTHFSA0A0A6YYL1 179 aa16.76■□□□□ 0.27
XPC-205ENST00000476581 MYOM2P54296 1465 aa16.75■□□□□ 0.27
XPC-205ENST00000476581 NRXN1Q9ULB1 1477 aa16.75■□□□□ 0.27
XPC-205ENST00000476581 A2ML1A8K2U0 1454 aa16.74■□□□□ 0.27
XPC-205ENST00000476581 TNRQ92752 1358 aa16.74■□□□□ 0.27
XPC-205ENST00000476581 GPRASP1Q5JY77 1395 aa16.73■□□□□ 0.27
XPC-205ENST00000476581 ADAMTSL3P82987 1691 aa16.73■□□□□ 0.27
XPC-205ENST00000476581 TMEM132EQ6IEE7 984 aa16.73■□□□□ 0.27
XPC-205ENST00000476581 PIK3C2GO75747 1445 aa16.72■□□□□ 0.27
XPC-205ENST00000476581 STAG3Q9UJ98 1225 aa16.72■□□□□ 0.27
XPC-205ENST00000476581 UBR1Q8IWV7 1749 aa16.7■□□□□ 0.26
XPC-205ENST00000476581 RBM19Q9Y4C8 960 aaKnown RBP16.69■□□□□ 0.26
XPC-205ENST00000476581 IQGAP1P46940 1657 aa16.68■□□□□ 0.26
XPC-205ENST00000476581 KIF7Q2M1P5 1343 aa16.68■□□□□ 0.26
XPC-205ENST00000476581 RPGRIP1LQ68CZ1 1315 aa16.67■□□□□ 0.26
XPC-205ENST00000476581 LAMC1P11047 1609 aa16.67■□□□□ 0.26
XPC-205ENST00000476581 KIAA1210Q9ULL0 1709 aa16.66■□□□□ 0.26
XPC-205ENST00000476581 POLR3GLQ9BT43 218 aa16.66■□□□□ 0.26
XPC-205ENST00000476581 C14orf93Q9H972 538 aaKnown RBP16.66■□□□□ 0.26
XPC-205ENST00000476581 ADGRB1O14514 1584 aa16.66■□□□□ 0.26
XPC-205ENST00000476581 RIMS2Q9UQ26 1411 aa16.66■□□□□ 0.26
XPC-205ENST00000476581 CCDC7Q96M83 1385 aa16.66■□□□□ 0.26
XPC-205ENST00000476581 ASXL1Q8IXJ9 1541 aa16.65■□□□□ 0.26
XPC-205ENST00000476581 ZFYVE9O95405 1425 aa16.65■□□□□ 0.26
XPC-205ENST00000476581 TESK2Q96S53 571 aa16.65■□□□□ 0.26
XPC-205ENST00000476581 VGFO15240 615 aaPredicted RBP16.64■□□□□ 0.25
XPC-205ENST00000476581 ERICH6Q7L0X2 663 aa16.64■□□□□ 0.25
XPC-205ENST00000476581 MYO3AQ8NEV4 1616 aa16.64■□□□□ 0.25
XPC-205ENST00000476581 LTKP29376 864 aa16.63■□□□□ 0.25
XPC-205ENST00000476581 DISP3Q9P2K9 1392 aa16.63■□□□□ 0.25
XPC-205ENST00000476581 POLR1AO95602 1720 aaPredicted RBP16.63■□□□□ 0.25
XPC-205ENST00000476581 TRAK1Q9UPV9 953 aa16.63■□□□□ 0.25
XPC-205ENST00000476581 PTPRMP28827 1452 aa16.62■□□□□ 0.25
XPC-205ENST00000476581 NRXN3Q9Y4C0 1643 aa16.62■□□□□ 0.25
XPC-205ENST00000476581 STAC3Q96MF2 364 aa16.62■□□□□ 0.25
XPC-205ENST00000476581 SCAF11Q99590 1463 aaKnown RBP16.61■□□□□ 0.25
XPC-205ENST00000476581 TMEM2Q9UHN6 1383 aa16.6■□□□□ 0.25
XPC-205ENST00000476581 STK26Q9P289 416 aa16.6■□□□□ 0.25
XPC-205ENST00000476581 ALKQ9UM73 1620 aa16.6■□□□□ 0.25
XPC-205ENST00000476581 NLRP1Q9C000 1473 aa16.59■□□□□ 0.25
XPC-205ENST00000476581 SETD1AO15047 1707 aaKnown RBP16.59■□□□□ 0.25
XPC-205ENST00000476581 SETBP1Q9Y6X0 1596 aa16.58■□□□□ 0.25
XPC-205ENST00000476581 BCANQ96GW7 911 aa16.58■□□□□ 0.24
XPC-205ENST00000476581 KDM5AP29375 1690 aaKnown RBP16.57■□□□□ 0.24
XPC-205ENST00000476581 SAFB2Q14151 953 aaKnown RBP eCLIP16.57■□□□□ 0.24
XPC-205ENST00000476581 FKBP8Q14318 412 aa16.56■□□□□ 0.24
XPC-205ENST00000476581 CEP170BQ9Y4F5 1589 aaPredicted RBP16.56■□□□□ 0.24
XPC-205ENST00000476581 MSH5O43196 834 aa16.56■□□□□ 0.24
XPC-205ENST00000476581 METP08581 1390 aa16.55■□□□□ 0.24
XPC-205ENST00000476581 ARHGEF28Q8N1W1 1705 aaKnown RBP16.55■□□□□ 0.24
XPC-205ENST00000476581 KDM4FA0A1W2PPD8 638 aa16.55■□□□□ 0.24
XPC-205ENST00000476581 CNGB1Q14028 1251 aaPredicted RBP16.54■□□□□ 0.24
XPC-205ENST00000476581 TXNDC2Q86VQ3 553 aa16.54■□□□□ 0.24
XPC-205ENST00000476581 SLC26A8Q96RN1 970 aa16.52■□□□□ 0.24
XPC-205ENST00000476581 QRICH2Q9H0J4 1663 aa16.52■□□□□ 0.24
XPC-205ENST00000476581 SLIT1O75093 1534 aa16.51■□□□□ 0.23
XPC-205ENST00000476581 ARHGAP23Q9P227 1491 aa16.51■□□□□ 0.23
XPC-205ENST00000476581 ADAMTS13Q76LX8 1427 aa16.51■□□□□ 0.23
XPC-205ENST00000476581 YTHDC2Q9H6S0 1430 aaKnown RBP16.51■□□□□ 0.23
XPC-205ENST00000476581 PLEKHH1Q9ULM0 1364 aa16.5■□□□□ 0.23
XPC-205ENST00000476581 WAPLQ7Z5K2 1190 aa16.49■□□□□ 0.23
XPC-205ENST00000476581 SETD1BQ9UPS6 1966 aaKnown RBP16.49■□□□□ 0.23
XPC-205ENST00000476581 CENPJQ9HC77 1338 aaPredicted RBP16.49■□□□□ 0.23
XPC-205ENST00000476581 FANCIQ9NVI1 1328 aa16.49■□□□□ 0.23
XPC-205ENST00000476581 ZNF142P52746 1687 aaPredicted RBP16.49■□□□□ 0.23
XPC-205ENST00000476581 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.49■□□□□ 0.23
XPC-205ENST00000476581 THEMISQ8N1K5 641 aaPredicted RBP16.48■□□□□ 0.23
XPC-205ENST00000476581 PRAM1Q96QH2 718 aa16.48■□□□□ 0.23
XPC-205ENST00000476581 EIF3AQ14152 1382 aaKnown RBP16.48■□□□□ 0.23
XPC-205ENST00000476581 TMF1P82094 1093 aa16.47■□□□□ 0.23
XPC-205ENST00000476581 PLEKHG1Q9ULL1 1385 aa16.46■□□□□ 0.23
XPC-205ENST00000476581 MYOM1P52179 1685 aa16.46■□□□□ 0.23
XPC-205ENST00000476581 NEFLP07196 543 aa16.45■□□□□ 0.22
XPC-205ENST00000476581 PTPRUQ92729 1446 aa16.45■□□□□ 0.22
XPC-205ENST00000476581 TULP4Q9NRJ4 1543 aa16.44■□□□□ 0.22
XPC-205ENST00000476581 MINK1Q8N4C8 1332 aaPredicted RBP16.44■□□□□ 0.22
XPC-205ENST00000476581 EID1Q9Y6B2 187 aa16.44■□□□□ 0.22
XPC-205ENST00000476581 MED14O60244 1454 aa16.44■□□□□ 0.22
XPC-205ENST00000476581 HSPA2P54652 639 aa16.42■□□□□ 0.22
XPC-205ENST00000476581 CCDC184Q52MB2 194 aa16.42■□□□□ 0.22
XPC-205ENST00000476581 LRPPRCP42704 1394 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms