RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 JCADQ9P266 1359 aa25.85■■□□□ 1.73
APOBEC3F-203ENST00000476513 SLC52A1Q9NWF4 448 aa25.85■■□□□ 1.73
APOBEC3F-203ENST00000476513 FGD6Q6ZV73 1430 aa25.83■■□□□ 1.73
APOBEC3F-203ENST00000476513 PHLPP1O60346 1717 aa25.81■■□□□ 1.72
APOBEC3F-203ENST00000476513 PLEKHG1Q9ULL1 1385 aa25.8■■□□□ 1.72
APOBEC3F-203ENST00000476513 ZFYVE9O95405 1425 aa25.8■■□□□ 1.72
APOBEC3F-203ENST00000476513 SETD1AO15047 1707 aaKnown RBP25.79■■□□□ 1.72
APOBEC3F-203ENST00000476513 APLP2Q06481 763 aa25.76■■□□□ 1.71
APOBEC3F-203ENST00000476513 RIMS2Q9UQ26 1411 aa25.75■■□□□ 1.71
APOBEC3F-203ENST00000476513 PPP1R15AO75807 674 aaPredicted RBP25.75■■□□□ 1.71
APOBEC3F-203ENST00000476513 COL16A1Q07092 1604 aaPredicted RBP25.74■■□□□ 1.71
APOBEC3F-203ENST00000476513 RPRD2Q5VT52 1461 aaKnown RBP25.74■■□□□ 1.71
APOBEC3F-203ENST00000476513 HDGFP51858 240 aaKnown RBP25.73■■□□□ 1.71
APOBEC3F-203ENST00000476513 TBX22Q9Y458 520 aa25.73■■□□□ 1.71
APOBEC3F-203ENST00000476513 NCOA3Q9Y6Q9 1424 aa25.72■■□□□ 1.71
APOBEC3F-203ENST00000476513 CHD2O14647 1828 aaKnown RBP25.72■■□□□ 1.71
APOBEC3F-203ENST00000476513 LRP6O75581 1613 aa25.72■■□□□ 1.71
APOBEC3F-203ENST00000476513 ADGRL2O95490 1459 aa25.72■■□□□ 1.71
APOBEC3F-203ENST00000476513 SPATA31A6Q5VVP1 1343 aa25.71■■□□□ 1.71
APOBEC3F-203ENST00000476513 C14orf37Q86TY3 774 aa25.69■■□□□ 1.7
APOBEC3F-203ENST00000476513 MEX3CQ5U5Q3 659 aaKnown RBP25.68■■□□□ 1.7
APOBEC3F-203ENST00000476513 ANKRD50Q9ULJ7 1429 aa25.68■■□□□ 1.7
APOBEC3F-203ENST00000476513 TMEM131LA2VDJ0 1609 aa25.67■■□□□ 1.7
APOBEC3F-203ENST00000476513 ZNF772Q68DY9 489 aaPredicted RBP25.67■■□□□ 1.7
APOBEC3F-203ENST00000476513 UPF1Q92900 1129 aaKnown RBP eCLIP25.67■■□□□ 1.7
APOBEC3F-203ENST00000476513 MYO5BQ9ULV0 1848 aa25.66■■□□□ 1.7
APOBEC3F-203ENST00000476513 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.66■■□□□ 1.7
APOBEC3F-203ENST00000476513 GCC2Q8IWJ2 1684 aa25.66■■□□□ 1.7
APOBEC3F-203ENST00000476513 ADAMTS13Q76LX8 1427 aa25.65■■□□□ 1.7
APOBEC3F-203ENST00000476513 CADPS2Q86UW7 1296 aa25.65■■□□□ 1.7
APOBEC3F-203ENST00000476513 C19orf44Q9H6X5 657 aa25.65■■□□□ 1.7
APOBEC3F-203ENST00000476513 CHGAP10645 457 aaKnown RBP25.64■■□□□ 1.7
APOBEC3F-203ENST00000476513 NUTM2DQ5VT03 806 aaPredicted RBP25.64■■□□□ 1.7
APOBEC3F-203ENST00000476513 TRIM52Q96A61 297 aa25.64■■□□□ 1.7
APOBEC3F-203ENST00000476513 AHDC1Q5TGY3 1603 aaPredicted RBP25.63■■□□□ 1.69
APOBEC3F-203ENST00000476513 ATF3P18847 181 aa25.63■■□□□ 1.69
APOBEC3F-203ENST00000476513 PIK3R4Q99570 1358 aa25.61■■□□□ 1.69
APOBEC3F-203ENST00000476513 FAM50AQ14320 339 aaKnown RBP25.61■■□□□ 1.69
APOBEC3F-203ENST00000476513 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.6■■□□□ 1.69
APOBEC3F-203ENST00000476513 SHPRHQ149N8 1683 aa25.58■■□□□ 1.69
APOBEC3F-203ENST00000476513 DIP2AQ14689 1571 aa25.58■■□□□ 1.69
APOBEC3F-203ENST00000476513 BRINP3Q76B58 766 aa25.58■■□□□ 1.69
APOBEC3F-203ENST00000476513 RXRBP28702 533 aa25.57■■□□□ 1.68
APOBEC3F-203ENST00000476513 AMOTL2Q9Y2J4 779 aa25.55■■□□□ 1.68
APOBEC3F-203ENST00000476513 PTPRUQ92729 1446 aa25.54■■□□□ 1.68
APOBEC3F-203ENST00000476513 NUTM2BA6NNL0 878 aaPredicted RBP25.54■■□□□ 1.68
APOBEC3F-203ENST00000476513 NUTM2EB1AL46 878 aaPredicted RBP25.54■■□□□ 1.68
APOBEC3F-203ENST00000476513 NUTM2AQ8IVF1 878 aaPredicted RBP25.54■■□□□ 1.68
APOBEC3F-203ENST00000476513 UNC13BO14795 1591 aa25.52■■□□□ 1.68
APOBEC3F-203ENST00000476513 TRPM2O94759 1503 aa25.52■■□□□ 1.68
APOBEC3F-203ENST00000476513 E9PCH4 1651 aa25.5■■□□□ 1.67
APOBEC3F-203ENST00000476513 CDK12Q9NYV4 1490 aaPredicted RBP25.5■■□□□ 1.67
APOBEC3F-203ENST00000476513 DCCP43146 1447 aa25.48■■□□□ 1.67
APOBEC3F-203ENST00000476513 AFF2P51816 1311 aa25.48■■□□□ 1.67
APOBEC3F-203ENST00000476513 ASXL1Q8IXJ9 1541 aa25.47■■□□□ 1.67
APOBEC3F-203ENST00000476513 SETD5Q9C0A6 1442 aa25.46■■□□□ 1.67
APOBEC3F-203ENST00000476513 MST1RQ04912 1400 aa25.44■■□□□ 1.66
APOBEC3F-203ENST00000476513 IQGAP3Q86VI3 1631 aa25.42■■□□□ 1.66
APOBEC3F-203ENST00000476513 LRRC59Q96AG4 307 aaKnown RBP25.41■■□□□ 1.66
APOBEC3F-203ENST00000476513 XRN1Q8IZH2 1706 aaKnown RBP25.4■■□□□ 1.66
APOBEC3F-203ENST00000476513 NUP155O75694 1391 aa25.4■■□□□ 1.66
APOBEC3F-203ENST00000476513 ROCK1Q13464 1354 aa25.4■■□□□ 1.66
APOBEC3F-203ENST00000476513 NRXN3Q9Y4C0 1643 aa25.39■■□□□ 1.66
APOBEC3F-203ENST00000476513 DDX17Q92841 729 aaKnown RBP25.38■■□□□ 1.65
APOBEC3F-203ENST00000476513 C8orf37Q96NL8 207 aa25.38■■□□□ 1.65
APOBEC3F-203ENST00000476513 QTRT2Q9H974 415 aaKnown RBP25.38■■□□□ 1.65
APOBEC3F-203ENST00000476513 SETBP1Q9Y6X0 1596 aa25.38■■□□□ 1.65
APOBEC3F-203ENST00000476513 RGS12O14924 1447 aa25.37■■□□□ 1.65
APOBEC3F-203ENST00000476513 NHSL1Q5SYE7 1610 aa25.37■■□□□ 1.65
APOBEC3F-203ENST00000476513 METP08581 1390 aa25.37■■□□□ 1.65
APOBEC3F-203ENST00000476513 PNPLA6Q8IY17 1366 aa25.37■■□□□ 1.65
APOBEC3F-203ENST00000476513 RBM6P78332 1123 aaKnown RBP25.36■■□□□ 1.65
APOBEC3F-203ENST00000476513 ADGRL3Q9HAR2 1447 aa25.34■■□□□ 1.65
APOBEC3F-203ENST00000476513 ZNF326Q5BKZ1 582 aaKnown RBP25.32■■□□□ 1.64
APOBEC3F-203ENST00000476513 ADAMTS2O95450 1211 aa25.28■■□□□ 1.64
APOBEC3F-203ENST00000476513 NGLY1Q96IV0 654 aa25.28■■□□□ 1.64
APOBEC3F-203ENST00000476513 C1orf167Q5SNV9 1468 aa25.25■■□□□ 1.63
APOBEC3F-203ENST00000476513 NALCNQ8IZF0 1738 aa25.24■■□□□ 1.63
APOBEC3F-203ENST00000476513 ITGAEP38570 1179 aa25.24■■□□□ 1.63
APOBEC3F-203ENST00000476513 SPHKAPQ2M3C7 1700 aa25.23■■□□□ 1.63
APOBEC3F-203ENST00000476513 NEXMIFQ5QGS0 1516 aa25.22■■□□□ 1.63
APOBEC3F-203ENST00000476513 ATAD2Q6PL18 1390 aa25.21■■□□□ 1.63
APOBEC3F-203ENST00000476513 SOS2Q07890 1332 aaPredicted RBP25.2■■□□□ 1.62
APOBEC3F-203ENST00000476513 ORAI2Q96SN7 254 aa25.2■■□□□ 1.62
APOBEC3F-203ENST00000476513 USP21Q9UK80 565 aa25.2■■□□□ 1.62
APOBEC3F-203ENST00000476513 LAMC1P11047 1609 aa25.19■■□□□ 1.62
APOBEC3F-203ENST00000476513 TRPC5Q9UL62 973 aaPredicted RBP25.17■■□□□ 1.62
APOBEC3F-203ENST00000476513 PTCH1Q13635 1447 aa25.17■■□□□ 1.62
APOBEC3F-203ENST00000476513 CLTCL1P53675 1640 aa25.16■■□□□ 1.62
APOBEC3F-203ENST00000476513 FNBP4Q8N3X1 1017 aaPredicted RBP25.16■■□□□ 1.62
APOBEC3F-203ENST00000476513 ROBO2Q9HCK4 1378 aa25.16■■□□□ 1.62
APOBEC3F-203ENST00000476513 ATRNO75882 1429 aa25.12■■□□□ 1.61
APOBEC3F-203ENST00000476513 VGFO15240 615 aaPredicted RBP25.09■■□□□ 1.61
APOBEC3F-203ENST00000476513 ZRANB1Q9UGI0 708 aa25.09■■□□□ 1.61
APOBEC3F-203ENST00000476513 PRAG1Q86YV5 1406 aa25.09■■□□□ 1.61
APOBEC3F-203ENST00000476513 SRCAPQ6ZRS2 3230 aa25.08■■□□□ 1.61
APOBEC3F-203ENST00000476513 COL22A1Q8NFW1 1626 aaPredicted RBP25.06■■□□□ 1.6
APOBEC3F-203ENST00000476513 FOXD1Q16676 465 aa25.06■■□□□ 1.6
APOBEC3F-203ENST00000476513 MYOM2P54296 1465 aa25.06■■□□□ 1.6
APOBEC3F-203ENST00000476513 HFM1A2PYH4 1435 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms