RNA–Protein interactions for RNA: ENST00000476104.1

SLC48A1-204, Transcript of solute carrier family 48 member 1, humanhuman

TSL 4

Gene SLC48A1, Length 567 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-204ENST00000476104 RIMS2Q9UQ26 1411 aa21.53■■□□□ 1.04
SLC48A1-204ENST00000476104 E9PCH4 1651 aa21.53■■□□□ 1.04
SLC48A1-204ENST00000476104 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.52■■□□□ 1.04
SLC48A1-204ENST00000476104 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
SLC48A1-204ENST00000476104 PROSER2Q86WR7 435 aaPredicted RBP21.51■■□□□ 1.03
SLC48A1-204ENST00000476104 ALKQ9UM73 1620 aa21.51■■□□□ 1.03
SLC48A1-204ENST00000476104 MYO5BQ9ULV0 1848 aa21.5■■□□□ 1.03
SLC48A1-204ENST00000476104 TMEM94Q12767 1356 aa21.49■■□□□ 1.03
SLC48A1-204ENST00000476104 PLEKHG1Q9ULL1 1385 aa21.49■■□□□ 1.03
SLC48A1-204ENST00000476104 ZFYVE9O95405 1425 aa21.49■■□□□ 1.03
SLC48A1-204ENST00000476104 TMEM131LA2VDJ0 1609 aa21.49■■□□□ 1.03
SLC48A1-204ENST00000476104 RRBP1Q9P2E9 1410 aaKnown RBP21.48■■□□□ 1.03
SLC48A1-204ENST00000476104 NUTM2DQ5VT03 806 aaPredicted RBP21.45■■□□□ 1.02
SLC48A1-204ENST00000476104 XIRP1Q702N8 1843 aaKnown RBP21.45■■□□□ 1.02
SLC48A1-204ENST00000476104 NKTRP30414 1462 aaKnown RBP21.44■■□□□ 1.02
SLC48A1-204ENST00000476104 RBM33Q96EV2 1170 aaKnown RBP21.43■■□□□ 1.02
SLC48A1-204ENST00000476104 TBX22Q9Y458 520 aa21.43■■□□□ 1.02
SLC48A1-204ENST00000476104 SOCS7O14512 581 aa21.42■■□□□ 1.02
SLC48A1-204ENST00000476104 NWD1Q149M9 1564 aa21.41■■□□□ 1.02
SLC48A1-204ENST00000476104 MSH6P52701 1360 aa21.4■■□□□ 1.02
SLC48A1-204ENST00000476104 MED1Q15648 1581 aaPredicted RBP21.4■■□□□ 1.02
SLC48A1-204ENST00000476104 NAIPQ13075 1403 aa21.39■■□□□ 1.02
SLC48A1-204ENST00000476104 ZNF326Q5BKZ1 582 aaKnown RBP21.39■■□□□ 1.01
SLC48A1-204ENST00000476104 FAM135BQ49AJ0 1406 aa21.38■■□□□ 1.01
SLC48A1-204ENST00000476104 TRIM52Q96A61 297 aa21.38■■□□□ 1.01
SLC48A1-204ENST00000476104 PHF23Q9BUL5 403 aaPredicted RBP21.38■■□□□ 1.01
SLC48A1-204ENST00000476104 C14orf37Q86TY3 774 aa21.37■■□□□ 1.01
SLC48A1-204ENST00000476104 SPHKAPQ2M3C7 1700 aa21.37■■□□□ 1.01
SLC48A1-204ENST00000476104 CHD2O14647 1828 aaKnown RBP21.36■■□□□ 1.01
SLC48A1-204ENST00000476104 ADAMTS13Q76LX8 1427 aa21.35■■□□□ 1.01
SLC48A1-204ENST00000476104 DIP2AQ14689 1571 aa21.35■■□□□ 1.01
SLC48A1-204ENST00000476104 PIK3R4Q99570 1358 aa21.35■■□□□ 1.01
SLC48A1-204ENST00000476104 HFM1A2PYH4 1435 aa21.33■■□□□ 1.01
SLC48A1-204ENST00000476104 SLAIN2Q9P270 581 aa21.32■■□□□ 1
SLC48A1-204ENST00000476104 NCOA3Q9Y6Q9 1424 aa21.3■■□□□ 1
SLC48A1-204ENST00000476104 TRPM2O94759 1503 aa21.3■■□□□ 1
SLC48A1-204ENST00000476104 SLC4A1APQ9BWU0 796 aaKnown RBP21.29■■□□□ 1
SLC48A1-204ENST00000476104 AMOTL2Q9Y2J4 779 aa21.29■■□□□ 1
SLC48A1-204ENST00000476104 ROBO1Q9Y6N7 1651 aa21.28■■□□□ 1
SLC48A1-204ENST00000476104 CLTCL1P53675 1640 aa21.26■□□□□ 0.99
SLC48A1-204ENST00000476104 ATF3P18847 181 aa21.26■□□□□ 0.99
SLC48A1-204ENST00000476104 C19orf44Q9H6X5 657 aa21.26■□□□□ 0.99
SLC48A1-204ENST00000476104 CADPS2Q86UW7 1296 aa21.25■□□□□ 0.99
SLC48A1-204ENST00000476104 KIF1BO60333 1816 aa21.24■□□□□ 0.99
SLC48A1-204ENST00000476104 SETBP1Q9Y6X0 1596 aa21.23■□□□□ 0.99
SLC48A1-204ENST00000476104 PTPRUQ92729 1446 aa21.22■□□□□ 0.99
SLC48A1-204ENST00000476104 VGFO15240 615 aaPredicted RBP21.2■□□□□ 0.98
SLC48A1-204ENST00000476104 NEXMIFQ5QGS0 1516 aa21.19■□□□□ 0.98
SLC48A1-204ENST00000476104 NRXN3Q9Y4C0 1643 aa21.19■□□□□ 0.98
SLC48A1-204ENST00000476104 METP08581 1390 aa21.19■□□□□ 0.98
SLC48A1-204ENST00000476104 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.18■□□□□ 0.98
SLC48A1-204ENST00000476104 PHLPP1O60346 1717 aa21.18■□□□□ 0.98
SLC48A1-204ENST00000476104 RPGRIP1LQ68CZ1 1315 aa21.17■□□□□ 0.98
SLC48A1-204ENST00000476104 XRN1Q8IZH2 1706 aaKnown RBP21.15■□□□□ 0.98
SLC48A1-204ENST00000476104 JCADQ9P266 1359 aa21.15■□□□□ 0.98
SLC48A1-204ENST00000476104 FOXD1Q16676 465 aa21.15■□□□□ 0.98
SLC48A1-204ENST00000476104 DCCP43146 1447 aa21.14■□□□□ 0.98
SLC48A1-204ENST00000476104 ACIN1Q9UKV3 1341 aaKnown RBP21.12■□□□□ 0.97
SLC48A1-204ENST00000476104 MPHOSPH9Q99550 1183 aa21.12■□□□□ 0.97
SLC48A1-204ENST00000476104 RGS17Q9UGC6 210 aaPredicted RBP21.11■□□□□ 0.97
SLC48A1-204ENST00000476104 CCDC144AA2RUR9 1427 aa21.11■□□□□ 0.97
SLC48A1-204ENST00000476104 BRINP3Q76B58 766 aa21.1■□□□□ 0.97
SLC48A1-204ENST00000476104 ADGRL3Q9HAR2 1447 aa21.08■□□□□ 0.97
SLC48A1-204ENST00000476104 COL16A1Q07092 1604 aaPredicted RBP21.07■□□□□ 0.96
SLC48A1-204ENST00000476104 AHDC1Q5TGY3 1603 aaPredicted RBP21.07■□□□□ 0.96
SLC48A1-204ENST00000476104 RGL3Q3MIN7 710 aa21.06■□□□□ 0.96
SLC48A1-204ENST00000476104 SPATA31A6Q5VVP1 1343 aa21.05■□□□□ 0.96
SLC48A1-204ENST00000476104 PPLO60437 1756 aa21.05■□□□□ 0.96
SLC48A1-204ENST00000476104 MST1RQ04912 1400 aa21.04■□□□□ 0.96
SLC48A1-204ENST00000476104 SETD5Q9C0A6 1442 aa21.04■□□□□ 0.96
SLC48A1-204ENST00000476104 MEX3CQ5U5Q3 659 aaKnown RBP21.04■□□□□ 0.96
SLC48A1-204ENST00000476104 PTCH1Q13635 1447 aa21.04■□□□□ 0.96
SLC48A1-204ENST00000476104 POTEAQ6S8J7 498 aa21.02■□□□□ 0.96
SLC48A1-204ENST00000476104 ASXL1Q8IXJ9 1541 aa21.02■□□□□ 0.96
SLC48A1-204ENST00000476104 ANKRD30BQ9BXX2 1392 aa21.01■□□□□ 0.95
SLC48A1-204ENST00000476104 ROBO2Q9HCK4 1378 aa21.01■□□□□ 0.95
SLC48A1-204ENST00000476104 SETD1AO15047 1707 aaKnown RBP21■□□□□ 0.95
SLC48A1-204ENST00000476104 NALCNQ8IZF0 1738 aa21■□□□□ 0.95
SLC48A1-204ENST00000476104 ADGRF5Q8IZF2 1346 aa21■□□□□ 0.95
SLC48A1-204ENST00000476104 SPATA31E1Q6ZUB1 1445 aa20.99■□□□□ 0.95
SLC48A1-204ENST00000476104 LRRC59Q96AG4 307 aaKnown RBP20.99■□□□□ 0.95
SLC48A1-204ENST00000476104 SHPRHQ149N8 1683 aa20.97■□□□□ 0.95
SLC48A1-204ENST00000476104 NUTM2BA6NNL0 878 aaPredicted RBP20.97■□□□□ 0.95
SLC48A1-204ENST00000476104 NUTM2EB1AL46 878 aaPredicted RBP20.97■□□□□ 0.95
SLC48A1-204ENST00000476104 NUTM2AQ8IVF1 878 aaPredicted RBP20.97■□□□□ 0.95
SLC48A1-204ENST00000476104 PRAG1Q86YV5 1406 aa20.96■□□□□ 0.95
SLC48A1-204ENST00000476104 C1orf167Q5SNV9 1468 aa20.95■□□□□ 0.94
SLC48A1-204ENST00000476104 STK26Q9P289 416 aa20.95■□□□□ 0.94
SLC48A1-204ENST00000476104 LRP6O75581 1613 aa20.95■□□□□ 0.94
SLC48A1-204ENST00000476104 RAB3GAP2Q9H2M9 1393 aa20.95■□□□□ 0.94
SLC48A1-204ENST00000476104 ZNF772Q68DY9 489 aaPredicted RBP20.94■□□□□ 0.94
SLC48A1-204ENST00000476104 DDX17Q92841 729 aaKnown RBP20.94■□□□□ 0.94
SLC48A1-204ENST00000476104 NHSL1Q5SYE7 1610 aa20.93■□□□□ 0.94
SLC48A1-204ENST00000476104 ORAI2Q96SN7 254 aa20.92■□□□□ 0.94
SLC48A1-204ENST00000476104 LRPPRCP42704 1394 aaKnown RBP20.91■□□□□ 0.94
SLC48A1-204ENST00000476104 IFT172Q9UG01 1749 aa20.9■□□□□ 0.94
SLC48A1-204ENST00000476104 TMEM132EQ6IEE7 984 aa20.9■□□□□ 0.94
SLC48A1-204ENST00000476104 PIK3C2GO75747 1445 aa20.89■□□□□ 0.94
SLC48A1-204ENST00000476104 ABCC11Q96J66 1382 aa20.88■□□□□ 0.93
SLC48A1-204ENST00000476104 TECPR2O15040 1411 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms