RNA–Protein interactions for RNA: ENST00000476018.2

VSTM4-203, Transcript of V-set and transmembrane domain containing 4, humanhuman

TSL 5

Gene VSTM4, Length 659 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-203ENST00000476018 RPRD2Q5VT52 1461 aaKnown RBP19.97■□□□□ 0.79
VSTM4-203ENST00000476018 IDI1Q13907 227 aa19.96■□□□□ 0.79
VSTM4-203ENST00000476018 SLC52A1Q9NWF4 448 aa19.96■□□□□ 0.79
VSTM4-203ENST00000476018 ADGRB3O60242 1522 aa19.96■□□□□ 0.79
VSTM4-203ENST00000476018 MED1Q15648 1581 aaPredicted RBP19.95■□□□□ 0.78
VSTM4-203ENST00000476018 RNF39Q9H2S5 420 aa19.92■□□□□ 0.78
VSTM4-203ENST00000476018 TET3O43151 1660 aa19.91■□□□□ 0.78
VSTM4-203ENST00000476018 GCC2Q8IWJ2 1684 aa19.87■□□□□ 0.77
VSTM4-203ENST00000476018 UNC13BO14795 1591 aa19.87■□□□□ 0.77
VSTM4-203ENST00000476018 ROCK1Q13464 1354 aa19.87■□□□□ 0.77
VSTM4-203ENST00000476018 KCNA6P17658 529 aa19.87■□□□□ 0.77
VSTM4-203ENST00000476018 XIRP1Q702N8 1843 aaKnown RBP19.87■□□□□ 0.77
VSTM4-203ENST00000476018 HDGFP51858 240 aaKnown RBP19.85■□□□□ 0.77
VSTM4-203ENST00000476018 NKTRP30414 1462 aaKnown RBP19.85■□□□□ 0.77
VSTM4-203ENST00000476018 TMEM94Q12767 1356 aa19.84■□□□□ 0.77
VSTM4-203ENST00000476018 BCANQ96GW7 911 aa19.84■□□□□ 0.77
VSTM4-203ENST00000476018 SLC26A8Q96RN1 970 aa19.84■□□□□ 0.77
VSTM4-203ENST00000476018 NWD1Q149M9 1564 aa19.83■□□□□ 0.77
VSTM4-203ENST00000476018 PPP1R15AO75807 674 aaPredicted RBP19.82■□□□□ 0.76
VSTM4-203ENST00000476018 ZFYVE9O95405 1425 aa19.82■□□□□ 0.76
VSTM4-203ENST00000476018 PLEKHG1Q9ULL1 1385 aa19.82■□□□□ 0.76
VSTM4-203ENST00000476018 PROSER2Q86WR7 435 aaPredicted RBP19.81■□□□□ 0.76
VSTM4-203ENST00000476018 FAM135BQ49AJ0 1406 aa19.81■□□□□ 0.76
VSTM4-203ENST00000476018 TMEM131LA2VDJ0 1609 aa19.8■□□□□ 0.76
VSTM4-203ENST00000476018 IQGAP3Q86VI3 1631 aa19.8■□□□□ 0.76
VSTM4-203ENST00000476018 RIMS2Q9UQ26 1411 aa19.8■□□□□ 0.76
VSTM4-203ENST00000476018 MYO5BQ9ULV0 1848 aa19.79■□□□□ 0.76
VSTM4-203ENST00000476018 E9PCH4 1651 aa19.78■□□□□ 0.76
VSTM4-203ENST00000476018 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.78■□□□□ 0.76
VSTM4-203ENST00000476018 MSH6P52701 1360 aa19.77■□□□□ 0.76
VSTM4-203ENST00000476018 KCNA4P22459 653 aa19.76■□□□□ 0.75
VSTM4-203ENST00000476018 NUP155O75694 1391 aa19.75■□□□□ 0.75
VSTM4-203ENST00000476018 CHGAP10645 457 aaKnown RBP19.75■□□□□ 0.75
VSTM4-203ENST00000476018 ROBO1Q9Y6N7 1651 aa19.74■□□□□ 0.75
VSTM4-203ENST00000476018 DIP2AQ14689 1571 aa19.74■□□□□ 0.75
VSTM4-203ENST00000476018 CHD2O14647 1828 aaKnown RBP19.73■□□□□ 0.75
VSTM4-203ENST00000476018 ITGAEP38570 1179 aa19.72■□□□□ 0.75
VSTM4-203ENST00000476018 TBX22Q9Y458 520 aa19.72■□□□□ 0.75
VSTM4-203ENST00000476018 RBM33Q96EV2 1170 aaKnown RBP19.71■□□□□ 0.75
VSTM4-203ENST00000476018 NCOA3Q9Y6Q9 1424 aa19.7■□□□□ 0.74
VSTM4-203ENST00000476018 PIK3R4Q99570 1358 aa19.7■□□□□ 0.74
VSTM4-203ENST00000476018 ADAMTS13Q76LX8 1427 aa19.68■□□□□ 0.74
VSTM4-203ENST00000476018 SLAIN2Q9P270 581 aa19.67■□□□□ 0.74
VSTM4-203ENST00000476018 TRPM2O94759 1503 aa19.66■□□□□ 0.74
VSTM4-203ENST00000476018 SPHKAPQ2M3C7 1700 aa19.65■□□□□ 0.74
VSTM4-203ENST00000476018 NUTM2DQ5VT03 806 aaPredicted RBP19.64■□□□□ 0.73
VSTM4-203ENST00000476018 C14orf37Q86TY3 774 aa19.64■□□□□ 0.73
VSTM4-203ENST00000476018 C1QBPQ07021 282 aaKnown RBP19.63■□□□□ 0.73
VSTM4-203ENST00000476018 PPARGC1BQ86YN6 1023 aaKnown RBP19.63■□□□□ 0.73
VSTM4-203ENST00000476018 PHLPP1O60346 1717 aa19.62■□□□□ 0.73
VSTM4-203ENST00000476018 RRBP1Q9P2E9 1410 aaKnown RBP19.61■□□□□ 0.73
VSTM4-203ENST00000476018 CADPS2Q86UW7 1296 aa19.61■□□□□ 0.73
VSTM4-203ENST00000476018 C19orf44Q9H6X5 657 aa19.6■□□□□ 0.73
VSTM4-203ENST00000476018 RGS17Q9UGC6 210 aaPredicted RBP19.6■□□□□ 0.73
VSTM4-203ENST00000476018 JCADQ9P266 1359 aa19.59■□□□□ 0.73
VSTM4-203ENST00000476018 ATF3P18847 181 aa19.59■□□□□ 0.73
VSTM4-203ENST00000476018 SETBP1Q9Y6X0 1596 aa19.58■□□□□ 0.73
VSTM4-203ENST00000476018 ZNF326Q5BKZ1 582 aaKnown RBP19.58■□□□□ 0.72
VSTM4-203ENST00000476018 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.57■□□□□ 0.72
VSTM4-203ENST00000476018 AMOTL2Q9Y2J4 779 aa19.57■□□□□ 0.72
VSTM4-203ENST00000476018 COL16A1Q07092 1604 aaPredicted RBP19.55■□□□□ 0.72
VSTM4-203ENST00000476018 DCCP43146 1447 aa19.55■□□□□ 0.72
VSTM4-203ENST00000476018 NRXN3Q9Y4C0 1643 aa19.54■□□□□ 0.72
VSTM4-203ENST00000476018 NAIPQ13075 1403 aa19.54■□□□□ 0.72
VSTM4-203ENST00000476018 PTPRUQ92729 1446 aa19.54■□□□□ 0.72
VSTM4-203ENST00000476018 AHDC1Q5TGY3 1603 aaPredicted RBP19.54■□□□□ 0.72
VSTM4-203ENST00000476018 XRN1Q8IZH2 1706 aaKnown RBP19.54■□□□□ 0.72
VSTM4-203ENST00000476018 CLTCL1P53675 1640 aa19.52■□□□□ 0.72
VSTM4-203ENST00000476018 SPATA31A6Q5VVP1 1343 aa19.51■□□□□ 0.71
VSTM4-203ENST00000476018 KIF1BO60333 1816 aa19.51■□□□□ 0.71
VSTM4-203ENST00000476018 NEXMIFQ5QGS0 1516 aa19.51■□□□□ 0.71
VSTM4-203ENST00000476018 POTEAQ6S8J7 498 aa19.49■□□□□ 0.71
VSTM4-203ENST00000476018 HFM1A2PYH4 1435 aa19.49■□□□□ 0.71
VSTM4-203ENST00000476018 METP08581 1390 aa19.47■□□□□ 0.71
VSTM4-203ENST00000476018 SHPRHQ149N8 1683 aa19.47■□□□□ 0.71
VSTM4-203ENST00000476018 BRINP3Q76B58 766 aa19.46■□□□□ 0.71
VSTM4-203ENST00000476018 TRIM52Q96A61 297 aa19.46■□□□□ 0.71
VSTM4-203ENST00000476018 MEX3CQ5U5Q3 659 aaKnown RBP19.45■□□□□ 0.7
VSTM4-203ENST00000476018 ASXL1Q8IXJ9 1541 aa19.45■□□□□ 0.7
VSTM4-203ENST00000476018 ADGRL3Q9HAR2 1447 aa19.44■□□□□ 0.7
VSTM4-203ENST00000476018 MST1RQ04912 1400 aa19.43■□□□□ 0.7
VSTM4-203ENST00000476018 VGFO15240 615 aaPredicted RBP19.43■□□□□ 0.7
VSTM4-203ENST00000476018 LRP6O75581 1613 aa19.43■□□□□ 0.7
VSTM4-203ENST00000476018 SLC4A1APQ9BWU0 796 aaKnown RBP19.42■□□□□ 0.7
VSTM4-203ENST00000476018 RPGRIP1LQ68CZ1 1315 aa19.42■□□□□ 0.7
VSTM4-203ENST00000476018 PTCH1Q13635 1447 aa19.42■□□□□ 0.7
VSTM4-203ENST00000476018 ZNF772Q68DY9 489 aaPredicted RBP19.41■□□□□ 0.7
VSTM4-203ENST00000476018 NHSL1Q5SYE7 1610 aa19.4■□□□□ 0.7
VSTM4-203ENST00000476018 SETD5Q9C0A6 1442 aa19.4■□□□□ 0.7
VSTM4-203ENST00000476018 NALCNQ8IZF0 1738 aa19.39■□□□□ 0.69
VSTM4-203ENST00000476018 PRAG1Q86YV5 1406 aa19.37■□□□□ 0.69
VSTM4-203ENST00000476018 SETD1AO15047 1707 aaKnown RBP19.37■□□□□ 0.69
VSTM4-203ENST00000476018 LRRC59Q96AG4 307 aaKnown RBP19.36■□□□□ 0.69
VSTM4-203ENST00000476018 PPLO60437 1756 aa19.35■□□□□ 0.69
VSTM4-203ENST00000476018 NUTM2BA6NNL0 878 aaPredicted RBP19.33■□□□□ 0.68
VSTM4-203ENST00000476018 NUTM2EB1AL46 878 aaPredicted RBP19.33■□□□□ 0.68
VSTM4-203ENST00000476018 NUTM2AQ8IVF1 878 aaPredicted RBP19.33■□□□□ 0.68
VSTM4-203ENST00000476018 C1orf167Q5SNV9 1468 aa19.33■□□□□ 0.68
VSTM4-203ENST00000476018 CCDC144AA2RUR9 1427 aa19.33■□□□□ 0.68
VSTM4-203ENST00000476018 ROBO2Q9HCK4 1378 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms