RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 NEXMIFQ5QGS0 1516 aa18.41■□□□□ 0.54
HLA-F-224ENST00000475996 ZEB1P37275 1124 aaPredicted RBP18.41■□□□□ 0.54
HLA-F-224ENST00000475996 RIMS2Q9UQ26 1411 aa18.4■□□□□ 0.54
HLA-F-224ENST00000475996 THEMISQ8N1K5 641 aaPredicted RBP18.4■□□□□ 0.54
HLA-F-224ENST00000475996 RPGRIP1LQ68CZ1 1315 aa18.4■□□□□ 0.54
HLA-F-224ENST00000475996 TMEM2Q9UHN6 1383 aa18.39■□□□□ 0.53
HLA-F-224ENST00000475996 PPP1R15AO75807 674 aaPredicted RBP18.38■□□□□ 0.53
HLA-F-224ENST00000475996 SENP3Q9H4L4 574 aaPredicted RBP18.38■□□□□ 0.53
HLA-F-224ENST00000475996 ZFYVE9O95405 1425 aa18.37■□□□□ 0.53
HLA-F-224ENST00000475996 ADGRF5Q8IZF2 1346 aa18.37■□□□□ 0.53
HLA-F-224ENST00000475996 SLIT1O75093 1534 aa18.36■□□□□ 0.53
HLA-F-224ENST00000475996 MYOM2P54296 1465 aa18.35■□□□□ 0.53
HLA-F-224ENST00000475996 LMTK3Q96Q04 1460 aa18.35■□□□□ 0.53
HLA-F-224ENST00000475996 ARHGAP23Q9P227 1491 aa18.35■□□□□ 0.53
HLA-F-224ENST00000475996 LTKP29376 864 aa18.34■□□□□ 0.53
HLA-F-224ENST00000475996 HSPA2P54652 639 aa18.34■□□□□ 0.53
HLA-F-224ENST00000475996 NBPF8Q3BBV2 869 aa18.34■□□□□ 0.53
HLA-F-224ENST00000475996 TXNDC2Q86VQ3 553 aa18.34■□□□□ 0.53
HLA-F-224ENST00000475996 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.34■□□□□ 0.53
HLA-F-224ENST00000475996 VGFO15240 615 aaPredicted RBP18.33■□□□□ 0.53
HLA-F-224ENST00000475996 PRAG1Q86YV5 1406 aa18.33■□□□□ 0.53
HLA-F-224ENST00000475996 HDGFP51858 240 aaKnown RBP18.33■□□□□ 0.52
HLA-F-224ENST00000475996 EID1Q9Y6B2 187 aa18.33■□□□□ 0.52
HLA-F-224ENST00000475996 STAC3Q96MF2 364 aa18.31■□□□□ 0.52
HLA-F-224ENST00000475996 SCAF11Q99590 1463 aaKnown RBP18.31■□□□□ 0.52
HLA-F-224ENST00000475996 ANKLE2Q86XL3 938 aa18.3■□□□□ 0.52
HLA-F-224ENST00000475996 NRXN1Q9ULB1 1477 aa18.3■□□□□ 0.52
HLA-F-224ENST00000475996 BCANQ96GW7 911 aa18.28■□□□□ 0.52
HLA-F-224ENST00000475996 PIK3C2GO75747 1445 aa18.28■□□□□ 0.52
HLA-F-224ENST00000475996 NCKAP5LQ9HCH0 1330 aa18.28■□□□□ 0.52
HLA-F-224ENST00000475996 POLR1AO95602 1720 aaPredicted RBP18.27■□□□□ 0.52
HLA-F-224ENST00000475996 PLEKHG1Q9ULL1 1385 aa18.27■□□□□ 0.51
HLA-F-224ENST00000475996 CFAP70Q5T0N1 1121 aa18.26■□□□□ 0.51
HLA-F-224ENST00000475996 IQGAP1P46940 1657 aa18.26■□□□□ 0.51
HLA-F-224ENST00000475996 TRPM1Q7Z4N2 1603 aa18.26■□□□□ 0.51
HLA-F-224ENST00000475996 NRXN3Q9Y4C0 1643 aa18.24■□□□□ 0.51
HLA-F-224ENST00000475996 NBPF1Q3BBV0 1214 aa18.23■□□□□ 0.51
HLA-F-224ENST00000475996 RALGAPBQ86X10 1494 aa18.23■□□□□ 0.51
HLA-F-224ENST00000475996 SETBP1Q9Y6X0 1596 aa18.23■□□□□ 0.51
HLA-F-224ENST00000475996 C14orf93Q9H972 538 aaKnown RBP18.23■□□□□ 0.51
HLA-F-224ENST00000475996 ALKQ9UM73 1620 aa18.22■□□□□ 0.51
HLA-F-224ENST00000475996 ROCK2O75116 1388 aaKnown RBP18.22■□□□□ 0.51
HLA-F-224ENST00000475996 KIAA1210Q9ULL0 1709 aa18.22■□□□□ 0.51
HLA-F-224ENST00000475996 NPHP4O75161 1426 aaPredicted RBP18.22■□□□□ 0.51
HLA-F-224ENST00000475996 SLC26A8Q96RN1 970 aa18.21■□□□□ 0.51
HLA-F-224ENST00000475996 ADAMTS13Q76LX8 1427 aa18.21■□□□□ 0.51
HLA-F-224ENST00000475996 LAMC1P11047 1609 aa18.2■□□□□ 0.5
HLA-F-224ENST00000475996 STRCQ7RTU9 1775 aa18.2■□□□□ 0.5
HLA-F-224ENST00000475996 SETD1AO15047 1707 aaKnown RBP18.2■□□□□ 0.5
HLA-F-224ENST00000475996 TMEM132EQ6IEE7 984 aa18.19■□□□□ 0.5
HLA-F-224ENST00000475996 MED14O60244 1454 aa18.19■□□□□ 0.5
HLA-F-224ENST00000475996 ASXL1Q8IXJ9 1541 aa18.18■□□□□ 0.5
HLA-F-224ENST00000475996 CARD11Q9BXL7 1154 aa18.18■□□□□ 0.5
HLA-F-224ENST00000475996 ADGRB1O14514 1584 aa18.16■□□□□ 0.5
HLA-F-224ENST00000475996 METP08581 1390 aa18.16■□□□□ 0.5
HLA-F-224ENST00000475996 GPRASP1Q5JY77 1395 aa18.16■□□□□ 0.5
HLA-F-224ENST00000475996 DIP2AQ14689 1571 aa18.15■□□□□ 0.5
HLA-F-224ENST00000475996 TBX22Q9Y458 520 aa18.14■□□□□ 0.49
HLA-F-224ENST00000475996 STK26Q9P289 416 aa18.13■□□□□ 0.49
HLA-F-224ENST00000475996 TRAK1Q9UPV9 953 aa18.12■□□□□ 0.49
HLA-F-224ENST00000475996 YTHDC2Q9H6S0 1430 aaKnown RBP18.11■□□□□ 0.49
HLA-F-224ENST00000475996 PTPRUQ92729 1446 aa18.1■□□□□ 0.49
HLA-F-224ENST00000475996 USP47Q96K76 1375 aa18.09■□□□□ 0.49
HLA-F-224ENST00000475996 LRPPRCP42704 1394 aaKnown RBP18.09■□□□□ 0.49
HLA-F-224ENST00000475996 HIRIP3Q9BW71 556 aaPredicted RBP18.08■□□□□ 0.48
HLA-F-224ENST00000475996 HSPA5P11021 654 aaKnown RBP18.07■□□□□ 0.48
HLA-F-224ENST00000475996 EIF4G2P78344 907 aaKnown RBP eCLIP18.07■□□□□ 0.48
HLA-F-224ENST00000475996 AMOTL2Q9Y2J4 779 aa18.07■□□□□ 0.48
HLA-F-224ENST00000475996 CHD2O14647 1828 aaKnown RBP18.07■□□□□ 0.48
HLA-F-224ENST00000475996 PIK3R4Q99570 1358 aa18.06■□□□□ 0.48
HLA-F-224ENST00000475996 ARHGEF28Q8N1W1 1705 aaKnown RBP18.05■□□□□ 0.48
HLA-F-224ENST00000475996 DMRT2Q9Y5R5 561 aa18.05■□□□□ 0.48
HLA-F-224ENST00000475996 ABCC11Q96J66 1382 aa18.05■□□□□ 0.48
HLA-F-224ENST00000475996 KNDC1Q76NI1 1749 aa18.04■□□□□ 0.48
HLA-F-224ENST00000475996 XRN1Q8IZH2 1706 aaKnown RBP18.04■□□□□ 0.48
HLA-F-224ENST00000475996 ST20-MTHFSA0A0A6YYL1 179 aa18.03■□□□□ 0.48
HLA-F-224ENST00000475996 KCNA6P17658 529 aa18.03■□□□□ 0.48
HLA-F-224ENST00000475996 SAFB2Q14151 953 aaKnown RBP eCLIP18.03■□□□□ 0.48
HLA-F-224ENST00000475996 EIF3AQ14152 1382 aaKnown RBP18.02■□□□□ 0.48
HLA-F-224ENST00000475996 CPS1P31327 1500 aa18.02■□□□□ 0.48
HLA-F-224ENST00000475996 WAPLQ7Z5K2 1190 aa18.02■□□□□ 0.47
HLA-F-224ENST00000475996 PRAM1Q96QH2 718 aa18.02■□□□□ 0.47
HLA-F-224ENST00000475996 ROBO2Q9HCK4 1378 aa18.02■□□□□ 0.47
HLA-F-224ENST00000475996 DLC1Q96QB1 1528 aa18.01■□□□□ 0.47
HLA-F-224ENST00000475996 TECPR2O15040 1411 aa18.01■□□□□ 0.47
HLA-F-224ENST00000475996 PLEKHH1Q9ULM0 1364 aa18.01■□□□□ 0.47
HLA-F-224ENST00000475996 POGKQ9P215 609 aa18.01■□□□□ 0.47
HLA-F-224ENST00000475996 CENPJQ9HC77 1338 aaPredicted RBP18.01■□□□□ 0.47
HLA-F-224ENST00000475996 STRCP1A6NGW2 1772 aa18■□□□□ 0.47
HLA-F-224ENST00000475996 NWD1Q149M9 1564 aa18■□□□□ 0.47
HLA-F-224ENST00000475996 ZNF335Q9H4Z2 1342 aaPredicted RBP18■□□□□ 0.47
HLA-F-224ENST00000475996 QRICH2Q9H0J4 1663 aa17.98■□□□□ 0.47
HLA-F-224ENST00000475996 PTCH1Q13635 1447 aa17.98■□□□□ 0.47
HLA-F-224ENST00000475996 FAM135BQ49AJ0 1406 aa17.97■□□□□ 0.47
HLA-F-224ENST00000475996 RBM33Q96EV2 1170 aaKnown RBP17.97■□□□□ 0.47
HLA-F-224ENST00000475996 SIRT1Q96EB6 747 aa17.96■□□□□ 0.47
HLA-F-224ENST00000475996 MINK1Q8N4C8 1332 aaPredicted RBP17.96■□□□□ 0.47
HLA-F-224ENST00000475996 TESK2Q96S53 571 aa17.95■□□□□ 0.46
HLA-F-224ENST00000475996 NKTRP30414 1462 aaKnown RBP17.94■□□□□ 0.46
HLA-F-224ENST00000475996 PROSER2Q86WR7 435 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms