RNA–Protein interactions for RNA: ENST00000475965.1

HDAC10-210, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,239 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-210ENST00000475965 NKTRP30414 1462 aaKnown RBP28.18■■■□□ 2.1
HDAC10-210ENST00000475965 TMEM131LA2VDJ0 1609 aa28.16■■■□□ 2.1
HDAC10-210ENST00000475965 FAM135BQ49AJ0 1406 aa28.15■■■□□ 2.1
HDAC10-210ENST00000475965 ZFYVE9O95405 1425 aa28.14■■■□□ 2.1
HDAC10-210ENST00000475965 E9PCH4 1651 aa28.13■■■□□ 2.09
HDAC10-210ENST00000475965 ROBO1Q9Y6N7 1651 aa28.13■■■□□ 2.09
HDAC10-210ENST00000475965 PROSER2Q86WR7 435 aaPredicted RBP28.13■■■□□ 2.09
HDAC10-210ENST00000475965 BCANQ96GW7 911 aa28.13■■■□□ 2.09
HDAC10-210ENST00000475965 CHD2O14647 1828 aaKnown RBP28.13■■■□□ 2.09
HDAC10-210ENST00000475965 PLEKHG1Q9ULL1 1385 aa28.11■■■□□ 2.09
HDAC10-210ENST00000475965 IQGAP3Q86VI3 1631 aa28.1■■■□□ 2.09
HDAC10-210ENST00000475965 ROCK1Q13464 1354 aa28.1■■■□□ 2.09
HDAC10-210ENST00000475965 RIMS2Q9UQ26 1411 aa28.09■■■□□ 2.09
HDAC10-210ENST00000475965 PPP1R15AO75807 674 aaPredicted RBP28.07■■■□□ 2.08
HDAC10-210ENST00000475965 HDGFP51858 240 aaKnown RBP28.07■■■□□ 2.08
HDAC10-210ENST00000475965 RBM33Q96EV2 1170 aaKnown RBP28.06■■■□□ 2.08
HDAC10-210ENST00000475965 MSH6P52701 1360 aa28.04■■■□□ 2.08
HDAC10-210ENST00000475965 CHGAP10645 457 aaKnown RBP28.01■■■□□ 2.07
HDAC10-210ENST00000475965 DIP2AQ14689 1571 aa28.01■■■□□ 2.07
HDAC10-210ENST00000475965 ABCF1Q8NE71 845 aaKnown RBP eCLIP28■■■□□ 2.07
HDAC10-210ENST00000475965 PHLPP1O60346 1717 aa27.98■■■□□ 2.07
HDAC10-210ENST00000475965 TBX22Q9Y458 520 aa27.97■■■□□ 2.07
HDAC10-210ENST00000475965 NUP155O75694 1391 aa27.96■■■□□ 2.07
HDAC10-210ENST00000475965 RGS17Q9UGC6 210 aaPredicted RBP27.94■■■□□ 2.06
HDAC10-210ENST00000475965 ADAMTS13Q76LX8 1427 aa27.93■■■□□ 2.06
HDAC10-210ENST00000475965 SPHKAPQ2M3C7 1700 aa27.93■■■□□ 2.06
HDAC10-210ENST00000475965 ITGAEP38570 1179 aa27.93■■■□□ 2.06
HDAC10-210ENST00000475965 SLAIN2Q9P270 581 aa27.93■■■□□ 2.06
HDAC10-210ENST00000475965 NCOA3Q9Y6Q9 1424 aa27.92■■■□□ 2.06
HDAC10-210ENST00000475965 PIK3R4Q99570 1358 aa27.9■■■□□ 2.06
HDAC10-210ENST00000475965 NUTM2DQ5VT03 806 aaPredicted RBP27.9■■■□□ 2.06
HDAC10-210ENST00000475965 TRPM2O94759 1503 aa27.9■■■□□ 2.06
HDAC10-210ENST00000475965 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.89■■■□□ 2.06
HDAC10-210ENST00000475965 COL16A1Q07092 1604 aaPredicted RBP27.86■■■□□ 2.05
HDAC10-210ENST00000475965 C14orf37Q86TY3 774 aa27.86■■■□□ 2.05
HDAC10-210ENST00000475965 JCADQ9P266 1359 aa27.85■■■□□ 2.05
HDAC10-210ENST00000475965 PPARGC1BQ86YN6 1023 aaKnown RBP27.83■■■□□ 2.05
HDAC10-210ENST00000475965 NRXN3Q9Y4C0 1643 aa27.82■■■□□ 2.04
HDAC10-210ENST00000475965 SETBP1Q9Y6X0 1596 aa27.81■■■□□ 2.04
HDAC10-210ENST00000475965 CADPS2Q86UW7 1296 aa27.8■■■□□ 2.04
HDAC10-210ENST00000475965 XRN1Q8IZH2 1706 aaKnown RBP27.8■■■□□ 2.04
HDAC10-210ENST00000475965 AHDC1Q5TGY3 1603 aaPredicted RBP27.79■■■□□ 2.04
HDAC10-210ENST00000475965 POTEAQ6S8J7 498 aa27.79■■■□□ 2.04
HDAC10-210ENST00000475965 C19orf44Q9H6X5 657 aa27.79■■■□□ 2.04
HDAC10-210ENST00000475965 PTPRUQ92729 1446 aa27.78■■■□□ 2.04
HDAC10-210ENST00000475965 ATF3P18847 181 aa27.78■■■□□ 2.04
HDAC10-210ENST00000475965 AMOTL2Q9Y2J4 779 aa27.77■■■□□ 2.04
HDAC10-210ENST00000475965 CLTCL1P53675 1640 aa27.76■■■□□ 2.03
HDAC10-210ENST00000475965 SHPRHQ149N8 1683 aa27.75■■■□□ 2.03
HDAC10-210ENST00000475965 KIF1BO60333 1816 aa27.75■■■□□ 2.03
HDAC10-210ENST00000475965 ZNF326Q5BKZ1 582 aaKnown RBP27.73■■■□□ 2.03
HDAC10-210ENST00000475965 DCCP43146 1447 aa27.73■■■□□ 2.03
HDAC10-210ENST00000475965 RRBP1Q9P2E9 1410 aaKnown RBP27.72■■■□□ 2.03
HDAC10-210ENST00000475965 NEXMIFQ5QGS0 1516 aa27.7■■■□□ 2.02
HDAC10-210ENST00000475965 SPATA31A6Q5VVP1 1343 aa27.69■■■□□ 2.02
HDAC10-210ENST00000475965 LRP6O75581 1613 aa27.69■■■□□ 2.02
HDAC10-210ENST00000475965 SETD1AO15047 1707 aaKnown RBP27.69■■■□□ 2.02
HDAC10-210ENST00000475965 NAIPQ13075 1403 aa27.67■■■□□ 2.02
HDAC10-210ENST00000475965 METP08581 1390 aa27.65■■■□□ 2.02
HDAC10-210ENST00000475965 BRINP3Q76B58 766 aa27.65■■■□□ 2.02
HDAC10-210ENST00000475965 ASXL1Q8IXJ9 1541 aa27.65■■■□□ 2.02
HDAC10-210ENST00000475965 NHSL1Q5SYE7 1610 aa27.64■■■□□ 2.02
HDAC10-210ENST00000475965 NALCNQ8IZF0 1738 aa27.64■■■□□ 2.01
HDAC10-210ENST00000475965 MEX3CQ5U5Q3 659 aaKnown RBP27.63■■■□□ 2.01
HDAC10-210ENST00000475965 MST1RQ04912 1400 aa27.62■■■□□ 2.01
HDAC10-210ENST00000475965 ADGRL3Q9HAR2 1447 aa27.6■■■□□ 2.01
HDAC10-210ENST00000475965 ZNF772Q68DY9 489 aaPredicted RBP27.56■■■□□ 2
HDAC10-210ENST00000475965 HFM1A2PYH4 1435 aa27.56■■■□□ 2
HDAC10-210ENST00000475965 SETD5Q9C0A6 1442 aa27.55■■■□□ 2
HDAC10-210ENST00000475965 TRIM52Q96A61 297 aa27.53■■■□□ 2
HDAC10-210ENST00000475965 PPLO60437 1756 aa27.53■■■□□ 2
HDAC10-210ENST00000475965 PTCH1Q13635 1447 aa27.51■■□□□ 1.99
HDAC10-210ENST00000475965 VGFO15240 615 aaPredicted RBP27.5■■□□□ 1.99
HDAC10-210ENST00000475965 NUTM2BA6NNL0 878 aaPredicted RBP27.49■■□□□ 1.99
HDAC10-210ENST00000475965 NUTM2EB1AL46 878 aaPredicted RBP27.49■■□□□ 1.99
HDAC10-210ENST00000475965 NUTM2AQ8IVF1 878 aaPredicted RBP27.49■■□□□ 1.99
HDAC10-210ENST00000475965 LRRC59Q96AG4 307 aaKnown RBP27.47■■□□□ 1.99
HDAC10-210ENST00000475965 RPGRIP1LQ68CZ1 1315 aa27.46■■□□□ 1.99
HDAC10-210ENST00000475965 SLC4A1APQ9BWU0 796 aaKnown RBP27.46■■□□□ 1.99
HDAC10-210ENST00000475965 LAMC1P11047 1609 aa27.45■■□□□ 1.99
HDAC10-210ENST00000475965 PRAG1Q86YV5 1406 aa27.45■■□□□ 1.98
HDAC10-210ENST00000475965 C1orf167Q5SNV9 1468 aa27.44■■□□□ 1.98
HDAC10-210ENST00000475965 ROBO2Q9HCK4 1378 aa27.43■■□□□ 1.98
HDAC10-210ENST00000475965 DDX17Q92841 729 aaKnown RBP27.42■■□□□ 1.98
HDAC10-210ENST00000475965 PNPLA6Q8IY17 1366 aa27.42■■□□□ 1.98
HDAC10-210ENST00000475965 AFF2P51816 1311 aa27.41■■□□□ 1.98
HDAC10-210ENST00000475965 CDK12Q9NYV4 1490 aaPredicted RBP27.4■■□□□ 1.98
HDAC10-210ENST00000475965 RXRBP28702 533 aa27.4■■□□□ 1.98
HDAC10-210ENST00000475965 IFT172Q9UG01 1749 aa27.36■■□□□ 1.97
HDAC10-210ENST00000475965 C8orf37Q96NL8 207 aa27.34■■□□□ 1.97
HDAC10-210ENST00000475965 CCDC144AA2RUR9 1427 aa27.33■■□□□ 1.97
HDAC10-210ENST00000475965 UPF1Q92900 1129 aaKnown RBP eCLIP27.33■■□□□ 1.97
HDAC10-210ENST00000475965 CDC42BPGQ6DT37 1551 aa27.33■■□□□ 1.97
HDAC10-210ENST00000475965 FOXD1Q16676 465 aa27.31■■□□□ 1.96
HDAC10-210ENST00000475965 ORAI2Q96SN7 254 aa27.31■■□□□ 1.96
HDAC10-210ENST00000475965 SOS2Q07890 1332 aaPredicted RBP27.3■■□□□ 1.96
HDAC10-210ENST00000475965 COL22A1Q8NFW1 1626 aaPredicted RBP27.29■■□□□ 1.96
HDAC10-210ENST00000475965 KNDC1Q76NI1 1749 aa27.27■■□□□ 1.96
HDAC10-210ENST00000475965 SPATA31E1Q6ZUB1 1445 aa27.27■■□□□ 1.96
HDAC10-210ENST00000475965 ADGRF5Q8IZF2 1346 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms