RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 FAM135BQ49AJ0 1406 aa17.32■□□□□ 0.36
NUDCD3-206ENST00000475952 LTKP29376 864 aa17.31■□□□□ 0.36
NUDCD3-206ENST00000475952 STAG3Q9UJ98 1225 aa17.29■□□□□ 0.36
NUDCD3-206ENST00000475952 TMEM131LA2VDJ0 1609 aa17.29■□□□□ 0.36
NUDCD3-206ENST00000475952 NUP155O75694 1391 aa17.28■□□□□ 0.36
NUDCD3-206ENST00000475952 PHLPP1O60346 1717 aa17.27■□□□□ 0.35
NUDCD3-206ENST00000475952 TXNDC2Q86VQ3 553 aa17.26■□□□□ 0.35
NUDCD3-206ENST00000475952 SLC52A1Q9NWF4 448 aa17.26■□□□□ 0.35
NUDCD3-206ENST00000475952 TMEM2Q9UHN6 1383 aa17.26■□□□□ 0.35
NUDCD3-206ENST00000475952 NAIPQ13075 1403 aa17.25■□□□□ 0.35
NUDCD3-206ENST00000475952 IDI1Q13907 227 aa17.25■□□□□ 0.35
NUDCD3-206ENST00000475952 EID1Q9Y6B2 187 aa17.25■□□□□ 0.35
NUDCD3-206ENST00000475952 KIF1BO60333 1816 aa17.25■□□□□ 0.35
NUDCD3-206ENST00000475952 TMEM94Q12767 1356 aa17.25■□□□□ 0.35
NUDCD3-206ENST00000475952 NWD1Q149M9 1564 aa17.24■□□□□ 0.35
NUDCD3-206ENST00000475952 HFM1A2PYH4 1435 aa17.23■□□□□ 0.35
NUDCD3-206ENST00000475952 SRCAPQ6ZRS2 3230 aa17.19■□□□□ 0.34
NUDCD3-206ENST00000475952 NKTRP30414 1462 aaKnown RBP17.19■□□□□ 0.34
NUDCD3-206ENST00000475952 COL16A1Q07092 1604 aaPredicted RBP17.19■□□□□ 0.34
NUDCD3-206ENST00000475952 CHD2O14647 1828 aaKnown RBP17.18■□□□□ 0.34
NUDCD3-206ENST00000475952 TRPM2O94759 1503 aa17.17■□□□□ 0.34
NUDCD3-206ENST00000475952 ZFYVE9O95405 1425 aa17.17■□□□□ 0.34
NUDCD3-206ENST00000475952 CLTCL1P53675 1640 aa17.17■□□□□ 0.34
NUDCD3-206ENST00000475952 KCNA6P17658 529 aa17.16■□□□□ 0.34
NUDCD3-206ENST00000475952 RBM33Q96EV2 1170 aaKnown RBP17.16■□□□□ 0.34
NUDCD3-206ENST00000475952 RIMS2Q9UQ26 1411 aa17.15■□□□□ 0.34
NUDCD3-206ENST00000475952 DIP2AQ14689 1571 aa17.14■□□□□ 0.33
NUDCD3-206ENST00000475952 LRP6O75581 1613 aa17.14■□□□□ 0.33
NUDCD3-206ENST00000475952 JCADQ9P266 1359 aa17.14■□□□□ 0.33
NUDCD3-206ENST00000475952 PROSER2Q86WR7 435 aaPredicted RBP17.13■□□□□ 0.33
NUDCD3-206ENST00000475952 SLC26A8Q96RN1 970 aa17.13■□□□□ 0.33
NUDCD3-206ENST00000475952 SHPRHQ149N8 1683 aa17.13■□□□□ 0.33
NUDCD3-206ENST00000475952 CHGAP10645 457 aaKnown RBP17.12■□□□□ 0.33
NUDCD3-206ENST00000475952 HDGFP51858 240 aaKnown RBP17.12■□□□□ 0.33
NUDCD3-206ENST00000475952 MSH6P52701 1360 aa17.12■□□□□ 0.33
NUDCD3-206ENST00000475952 PLEKHG1Q9ULL1 1385 aa17.12■□□□□ 0.33
NUDCD3-206ENST00000475952 PPP1R15AO75807 674 aaPredicted RBP17.11■□□□□ 0.33
NUDCD3-206ENST00000475952 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.09■□□□□ 0.33
NUDCD3-206ENST00000475952 TRIM52Q96A61 297 aa17.09■□□□□ 0.33
NUDCD3-206ENST00000475952 BCANQ96GW7 911 aa17.09■□□□□ 0.33
NUDCD3-206ENST00000475952 UPF1Q92900 1129 aaKnown RBP eCLIP17.08■□□□□ 0.321e-8■■■■■ 34.2
NUDCD3-206ENST00000475952 SLAIN2Q9P270 581 aa17.08■□□□□ 0.32
NUDCD3-206ENST00000475952 AHDC1Q5TGY3 1603 aaPredicted RBP17.07■□□□□ 0.32
NUDCD3-206ENST00000475952 NRXN3Q9Y4C0 1643 aa17.07■□□□□ 0.32
NUDCD3-206ENST00000475952 PPLO60437 1756 aa17.07■□□□□ 0.32
NUDCD3-206ENST00000475952 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.06■□□□□ 0.32
NUDCD3-206ENST00000475952 NEXMIFQ5QGS0 1516 aa17.06■□□□□ 0.32
NUDCD3-206ENST00000475952 SETBP1Q9Y6X0 1596 aa17.05■□□□□ 0.32
NUDCD3-206ENST00000475952 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
NUDCD3-206ENST00000475952 SPATA31A6Q5VVP1 1343 aa17.03■□□□□ 0.32
NUDCD3-206ENST00000475952 IFT172Q9UG01 1749 aa17.02■□□□□ 0.32
NUDCD3-206ENST00000475952 ADAMTS13Q76LX8 1427 aa17.02■□□□□ 0.31
NUDCD3-206ENST00000475952 ACIN1Q9UKV3 1341 aaKnown RBP17.01■□□□□ 0.31
NUDCD3-206ENST00000475952 ZNF326Q5BKZ1 582 aaKnown RBP17.01■□□□□ 0.31
NUDCD3-206ENST00000475952 NUTM2DQ5VT03 806 aaPredicted RBP17.01■□□□□ 0.31
NUDCD3-206ENST00000475952 ZNF772Q68DY9 489 aaPredicted RBP17.01■□□□□ 0.31
NUDCD3-206ENST00000475952 XRN1Q8IZH2 1706 aaKnown RBP17.01■□□□□ 0.31
NUDCD3-206ENST00000475952 CDK12Q9NYV4 1490 aaPredicted RBP17■□□□□ 0.31
NUDCD3-206ENST00000475952 MEX3CQ5U5Q3 659 aaKnown RBP17■□□□□ 0.31
NUDCD3-206ENST00000475952 SETD5Q9C0A6 1442 aa17■□□□□ 0.31
NUDCD3-206ENST00000475952 PIK3R4Q99570 1358 aa17■□□□□ 0.31
NUDCD3-206ENST00000475952 NCOA3Q9Y6Q9 1424 aa16.99■□□□□ 0.31
NUDCD3-206ENST00000475952 TBX22Q9Y458 520 aa16.98■□□□□ 0.31
NUDCD3-206ENST00000475952 CCDC144AA2RUR9 1427 aa16.96■□□□□ 0.31
NUDCD3-206ENST00000475952 NHSL1Q5SYE7 1610 aa16.96■□□□□ 0.3
NUDCD3-206ENST00000475952 EP400Q96L91 3159 aa16.95■□□□□ 0.3
NUDCD3-206ENST00000475952 RXRBP28702 533 aa16.94■□□□□ 0.3
NUDCD3-206ENST00000475952 MPHOSPH9Q99550 1183 aa16.93■□□□□ 0.3
NUDCD3-206ENST00000475952 RAB3GAP2Q9H2M9 1393 aa16.92■□□□□ 0.3
NUDCD3-206ENST00000475952 ASXL1Q8IXJ9 1541 aa16.91■□□□□ 0.3
NUDCD3-206ENST00000475952 RGS12O14924 1447 aa16.91■□□□□ 0.3
NUDCD3-206ENST00000475952 FOXD1Q16676 465 aa16.91■□□□□ 0.3
NUDCD3-206ENST00000475952 C14orf37Q86TY3 774 aa16.91■□□□□ 0.3
NUDCD3-206ENST00000475952 CADPS2Q86UW7 1296 aa16.91■□□□□ 0.3
NUDCD3-206ENST00000475952 NALCNQ8IZF0 1738 aa16.9■□□□□ 0.3
NUDCD3-206ENST00000475952 RPGRIP1LQ68CZ1 1315 aa16.9■□□□□ 0.3
NUDCD3-206ENST00000475952 PTPRUQ92729 1446 aa16.89■□□□□ 0.29
NUDCD3-206ENST00000475952 BRINP3Q76B58 766 aa16.89■□□□□ 0.29
NUDCD3-206ENST00000475952 C19orf44Q9H6X5 657 aa16.89■□□□□ 0.29
NUDCD3-206ENST00000475952 AFF2P51816 1311 aa16.89■□□□□ 0.29
NUDCD3-206ENST00000475952 NUTM2BA6NNL0 878 aaPredicted RBP16.88■□□□□ 0.29
NUDCD3-206ENST00000475952 NUTM2EB1AL46 878 aaPredicted RBP16.88■□□□□ 0.29
NUDCD3-206ENST00000475952 VGFO15240 615 aaPredicted RBP16.88■□□□□ 0.29
NUDCD3-206ENST00000475952 ATF3P18847 181 aa16.88■□□□□ 0.29
NUDCD3-206ENST00000475952 NUTM2AQ8IVF1 878 aaPredicted RBP16.88■□□□□ 0.29
NUDCD3-206ENST00000475952 DCCP43146 1447 aa16.87■□□□□ 0.29
NUDCD3-206ENST00000475952 AMOTL2Q9Y2J4 779 aa16.87■□□□□ 0.29
NUDCD3-206ENST00000475952 SPATA31E1Q6ZUB1 1445 aa16.87■□□□□ 0.29
NUDCD3-206ENST00000475952 LAMC1P11047 1609 aa16.86■□□□□ 0.29
NUDCD3-206ENST00000475952 KNDC1Q76NI1 1749 aa16.86■□□□□ 0.29
NUDCD3-206ENST00000475952 METP08581 1390 aa16.86■□□□□ 0.29
NUDCD3-206ENST00000475952 MST1RQ04912 1400 aa16.84■□□□□ 0.29
NUDCD3-206ENST00000475952 PTCH1Q13635 1447 aa16.83■□□□□ 0.28
NUDCD3-206ENST00000475952 ANKRD30BQ9BXX2 1392 aa16.83■□□□□ 0.28
NUDCD3-206ENST00000475952 PRAG1Q86YV5 1406 aa16.81■□□□□ 0.28
NUDCD3-206ENST00000475952 ADGRL3Q9HAR2 1447 aa16.8■□□□□ 0.28
NUDCD3-206ENST00000475952 PNPLA6Q8IY17 1366 aa16.8■□□□□ 0.28
NUDCD3-206ENST00000475952 RBM6P78332 1123 aaKnown RBP16.8■□□□□ 0.28
NUDCD3-206ENST00000475952 RGL3Q3MIN7 710 aa16.79■□□□□ 0.28
NUDCD3-206ENST00000475952 C8orf37Q96NL8 207 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms