RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 LTKP29376 864 aa22.38■■□□□ 1.17
SNX13-207ENST00000475800 ADGRB3O60242 1522 aa22.37■■□□□ 1.17
SNX13-207ENST00000475800 STRCP1A6NGW2 1772 aa22.37■■□□□ 1.17
SNX13-207ENST00000475800 SOCS7O14512 581 aa22.36■■□□□ 1.17
SNX13-207ENST00000475800 SCAF11Q99590 1463 aaKnown RBP22.34■■□□□ 1.17
SNX13-207ENST00000475800 SLIT1O75093 1534 aa22.33■■□□□ 1.17
SNX13-207ENST00000475800 TMEM131LA2VDJ0 1609 aa22.32■■□□□ 1.16
SNX13-207ENST00000475800 MYO5BQ9ULV0 1848 aa22.32■■□□□ 1.16
SNX13-207ENST00000475800 EID1Q9Y6B2 187 aa22.32■■□□□ 1.16
SNX13-207ENST00000475800 KIF1BO60333 1816 aa22.31■■□□□ 1.16
SNX13-207ENST00000475800 ARHGAP23Q9P227 1491 aa22.31■■□□□ 1.16
SNX13-207ENST00000475800 LRRC7Q96NW7 1537 aa22.31■■□□□ 1.16
SNX13-207ENST00000475800 CLTCL1P53675 1640 aa22.3■■□□□ 1.16
SNX13-207ENST00000475800 TMEM2Q9UHN6 1383 aa22.29■■□□□ 1.16
SNX13-207ENST00000475800 ALKQ9UM73 1620 aa22.27■■□□□ 1.16
SNX13-207ENST00000475800 CHGAP10645 457 aaKnown RBP22.26■■□□□ 1.15
SNX13-207ENST00000475800 HDGFP51858 240 aaKnown RBP22.26■■□□□ 1.15
SNX13-207ENST00000475800 FOXD1Q16676 465 aa22.26■■□□□ 1.15
SNX13-207ENST00000475800 CCDC144AA2RUR9 1427 aa22.25■■□□□ 1.15
SNX13-207ENST00000475800 BCANQ96GW7 911 aa22.25■■□□□ 1.15
SNX13-207ENST00000475800 RBM33Q96EV2 1170 aaKnown RBP22.24■■□□□ 1.15
SNX13-207ENST00000475800 SLC26A8Q96RN1 970 aa22.24■■□□□ 1.15
SNX13-207ENST00000475800 MED1Q15648 1581 aaPredicted RBP22.23■■□□□ 1.15
SNX13-207ENST00000475800 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.21■■□□□ 1.15
SNX13-207ENST00000475800 ZFYVE9O95405 1425 aa22.21■■□□□ 1.15
SNX13-207ENST00000475800 RIMS2Q9UQ26 1411 aa22.21■■□□□ 1.15
SNX13-207ENST00000475800 PHF23Q9BUL5 403 aaPredicted RBP22.2■■□□□ 1.14
SNX13-207ENST00000475800 ANKRD30BQ9BXX2 1392 aa22.18■■□□□ 1.14
SNX13-207ENST00000475800 XIRP1Q702N8 1843 aaKnown RBP22.16■■□□□ 1.14
SNX13-207ENST00000475800 ZNF326Q5BKZ1 582 aaKnown RBP22.16■■□□□ 1.14
SNX13-207ENST00000475800 PPP1R15AO75807 674 aaPredicted RBP22.15■■□□□ 1.14
SNX13-207ENST00000475800 RPGRIP1LQ68CZ1 1315 aa22.14■■□□□ 1.14
SNX13-207ENST00000475800 PROSER2Q86WR7 435 aaPredicted RBP22.14■■□□□ 1.13
SNX13-207ENST00000475800 TMEM94Q12767 1356 aa22.13■■□□□ 1.13
SNX13-207ENST00000475800 PLEKHG1Q9ULL1 1385 aa22.13■■□□□ 1.13
SNX13-207ENST00000475800 NUTM2DQ5VT03 806 aaPredicted RBP22.13■■□□□ 1.13
SNX13-207ENST00000475800 NEXMIFQ5QGS0 1516 aa22.11■■□□□ 1.13
SNX13-207ENST00000475800 KCNA6P17658 529 aa22.11■■□□□ 1.13
SNX13-207ENST00000475800 SPATA31E1Q6ZUB1 1445 aa22.11■■□□□ 1.13
SNX13-207ENST00000475800 PPLO60437 1756 aa22.1■■□□□ 1.13
SNX13-207ENST00000475800 PCGF6Q9BYE7 350 aa22.09■■□□□ 1.13
SNX13-207ENST00000475800 VGFO15240 615 aaPredicted RBP22.07■■□□□ 1.12
SNX13-207ENST00000475800 DHX57Q6P158 1386 aaKnown RBP22.06■■□□□ 1.12
SNX13-207ENST00000475800 DIP2AQ14689 1571 aa22.06■■□□□ 1.12
SNX13-207ENST00000475800 IFT172Q9UG01 1749 aa22.06■■□□□ 1.12
SNX13-207ENST00000475800 SETBP1Q9Y6X0 1596 aa22.04■■□□□ 1.12
SNX13-207ENST00000475800 RGL3Q3MIN7 710 aa22.03■■□□□ 1.12
SNX13-207ENST00000475800 TBX22Q9Y458 520 aa22.01■■□□□ 1.11
SNX13-207ENST00000475800 C14orf37Q86TY3 774 aa22■■□□□ 1.11
SNX13-207ENST00000475800 NRXN3Q9Y4C0 1643 aa21.99■■□□□ 1.11
SNX13-207ENST00000475800 ADAMTS13Q76LX8 1427 aa21.99■■□□□ 1.11
SNX13-207ENST00000475800 ROBO1Q9Y6N7 1651 aa21.99■■□□□ 1.11
SNX13-207ENST00000475800 MSH6P52701 1360 aa21.99■■□□□ 1.11
SNX13-207ENST00000475800 PIK3R4Q99570 1358 aa21.99■■□□□ 1.11
SNX13-207ENST00000475800 STAC3Q96MF2 364 aa21.98■■□□□ 1.11
SNX13-207ENST00000475800 FAM135BQ49AJ0 1406 aa21.97■■□□□ 1.11
SNX13-207ENST00000475800 NKTRP30414 1462 aaKnown RBP21.97■■□□□ 1.11
SNX13-207ENST00000475800 CHD2O14647 1828 aaKnown RBP21.97■■□□□ 1.11
SNX13-207ENST00000475800 NWD1Q149M9 1564 aa21.97■■□□□ 1.11
SNX13-207ENST00000475800 MYOM2P54296 1465 aa21.96■■□□□ 1.11
SNX13-207ENST00000475800 SLAIN2Q9P270 581 aa21.93■■□□□ 1.1
SNX13-207ENST00000475800 RGS17Q9UGC6 210 aaPredicted RBP21.93■■□□□ 1.1
SNX13-207ENST00000475800 ADGRF5Q8IZF2 1346 aa21.92■■□□□ 1.1
SNX13-207ENST00000475800 NRXN1Q9ULB1 1477 aa21.91■■□□□ 1.1
SNX13-207ENST00000475800 SETD1AO15047 1707 aaKnown RBP21.91■■□□□ 1.1
SNX13-207ENST00000475800 PIK3C2GO75747 1445 aa21.9■■□□□ 1.1
SNX13-207ENST00000475800 LAMC1P11047 1609 aa21.89■■□□□ 1.09
SNX13-207ENST00000475800 DCAF11Q8TEB1 546 aa21.88■■□□□ 1.09
SNX13-207ENST00000475800 PHLPP1O60346 1717 aa21.87■■□□□ 1.09
SNX13-207ENST00000475800 SIN3AQ96ST3 1273 aa21.86■■□□□ 1.09
SNX13-207ENST00000475800 AMOTL2Q9Y2J4 779 aa21.86■■□□□ 1.09
SNX13-207ENST00000475800 CLSPNQ9HAW4 1339 aa21.85■■□□□ 1.09
SNX13-207ENST00000475800 XRN1Q8IZH2 1706 aaKnown RBP21.85■■□□□ 1.09
SNX13-207ENST00000475800 METP08581 1390 aa21.85■■□□□ 1.09
SNX13-207ENST00000475800 ATF3P18847 181 aa21.84■■□□□ 1.09
SNX13-207ENST00000475800 NEUROD1Q13562 356 aa21.84■■□□□ 1.09
SNX13-207ENST00000475800 POTEAQ6S8J7 498 aa21.84■■□□□ 1.09
SNX13-207ENST00000475800 KDM2AQ9Y2K7 1162 aa21.84■■□□□ 1.09
SNX13-207ENST00000475800 PTPRUQ92729 1446 aa21.82■■□□□ 1.08
SNX13-207ENST00000475800 C14orf93Q9H972 538 aaKnown RBP21.82■■□□□ 1.08
SNX13-207ENST00000475800 PRAG1Q86YV5 1406 aa21.8■■□□□ 1.08
SNX13-207ENST00000475800 NCOA3Q9Y6Q9 1424 aa21.8■■□□□ 1.08
SNX13-207ENST00000475800 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.8■■□□□ 1.08
SNX13-207ENST00000475800 C19orf44Q9H6X5 657 aa21.8■■□□□ 1.08
SNX13-207ENST00000475800 CADPS2Q86UW7 1296 aa21.79■■□□□ 1.08
SNX13-207ENST00000475800 KIAA1210Q9ULL0 1709 aa21.78■■□□□ 1.08
SNX13-207ENST00000475800 JCADQ9P266 1359 aa21.78■■□□□ 1.08
SNX13-207ENST00000475800 L3MBTL2Q969R5 705 aa21.78■■□□□ 1.08
SNX13-207ENST00000475800 TONSLQ96HA7 1378 aa21.77■■□□□ 1.08
SNX13-207ENST00000475800 PTCH1Q13635 1447 aa21.77■■□□□ 1.08
SNX13-207ENST00000475800 CFAP70Q5T0N1 1121 aa21.76■■□□□ 1.07
SNX13-207ENST00000475800 MEX3CQ5U5Q3 659 aaKnown RBP21.76■■□□□ 1.07
SNX13-207ENST00000475800 KNDC1Q76NI1 1749 aa21.76■■□□□ 1.07
SNX13-207ENST00000475800 ASXL1Q8IXJ9 1541 aa21.75■■□□□ 1.07
SNX13-207ENST00000475800 LRPPRCP42704 1394 aaKnown RBP21.75■■□□□ 1.07
SNX13-207ENST00000475800 COL16A1Q07092 1604 aaPredicted RBP21.75■■□□□ 1.07
SNX13-207ENST00000475800 ABCC11Q96J66 1382 aa21.74■■□□□ 1.07
SNX13-207ENST00000475800 TECPR2O15040 1411 aa21.73■■□□□ 1.07
SNX13-207ENST00000475800 YTHDC2Q9H6S0 1430 aaKnown RBP21.73■■□□□ 1.07
SNX13-207ENST00000475800 CCER1Q8TC90 406 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms