RNA–Protein interactions for RNA: ENST00000475775.1

TRIM11-203, Transcript of tripartite motif containing 11, humanhuman

TSL 2

Gene TRIM11, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-203ENST00000475775 UPF1Q92900 1129 aaKnown RBP eCLIP22.77■■□□□ 1.24
TRIM11-203ENST00000475775 SLAIN2Q9P270 581 aa22.77■■□□□ 1.24
TRIM11-203ENST00000475775 RPRD2Q5VT52 1461 aaKnown RBP22.77■■□□□ 1.24
TRIM11-203ENST00000475775 MSH6P52701 1360 aa22.76■■□□□ 1.23
TRIM11-203ENST00000475775 NOS1P29475 1434 aa22.75■■□□□ 1.23
TRIM11-203ENST00000475775 IDI1Q13907 227 aa22.75■■□□□ 1.23
TRIM11-203ENST00000475775 ADGRB3O60242 1522 aa22.74■■□□□ 1.23
TRIM11-203ENST00000475775 CHD2O14647 1828 aaKnown RBP22.73■■□□□ 1.23
TRIM11-203ENST00000475775 NWD1Q149M9 1564 aa22.73■■□□□ 1.23
TRIM11-203ENST00000475775 SLC52A1Q9NWF4 448 aa22.73■■□□□ 1.23
TRIM11-203ENST00000475775 NKTRP30414 1462 aaKnown RBP22.73■■□□□ 1.23
TRIM11-203ENST00000475775 TRIM52Q96A61 297 aa22.72■■□□□ 1.23
TRIM11-203ENST00000475775 COL16A1Q07092 1604 aaPredicted RBP22.71■■□□□ 1.23
TRIM11-203ENST00000475775 BCANQ96GW7 911 aa22.7■■□□□ 1.22
TRIM11-203ENST00000475775 ZNF772Q68DY9 489 aaPredicted RBP22.69■■□□□ 1.22
TRIM11-203ENST00000475775 SRCAPQ6ZRS2 3230 aa22.68■■□□□ 1.22
TRIM11-203ENST00000475775 MEX3CQ5U5Q3 659 aaKnown RBP22.68■■□□□ 1.22
TRIM11-203ENST00000475775 MYO5BQ9ULV0 1848 aa22.68■■□□□ 1.22
TRIM11-203ENST00000475775 LRP6O75581 1613 aa22.68■■□□□ 1.22
TRIM11-203ENST00000475775 ROCK1Q13464 1354 aa22.67■■□□□ 1.22
TRIM11-203ENST00000475775 UNC13BO14795 1591 aa22.67■■□□□ 1.22
TRIM11-203ENST00000475775 SPATA31A6Q5VVP1 1343 aa22.66■■□□□ 1.22
TRIM11-203ENST00000475775 SHPRHQ149N8 1683 aa22.63■■□□□ 1.21
TRIM11-203ENST00000475775 GCC2Q8IWJ2 1684 aa22.62■■□□□ 1.21
TRIM11-203ENST00000475775 HDGFP51858 240 aaKnown RBP22.62■■□□□ 1.21
TRIM11-203ENST00000475775 RXRBP28702 533 aa22.61■■□□□ 1.21
TRIM11-203ENST00000475775 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.6■■□□□ 1.21
TRIM11-203ENST00000475775 PPP1R15AO75807 674 aaPredicted RBP22.58■■□□□ 1.21
TRIM11-203ENST00000475775 C14orf37Q86TY3 774 aa22.57■■□□□ 1.2
TRIM11-203ENST00000475775 PLEKHG1Q9ULL1 1385 aa22.57■■□□□ 1.2
TRIM11-203ENST00000475775 AHDC1Q5TGY3 1603 aaPredicted RBP22.57■■□□□ 1.2
TRIM11-203ENST00000475775 IQGAP3Q86VI3 1631 aa22.57■■□□□ 1.2
TRIM11-203ENST00000475775 ZFYVE9O95405 1425 aa22.57■■□□□ 1.2
TRIM11-203ENST00000475775 RIMS2Q9UQ26 1411 aa22.55■■□□□ 1.2
TRIM11-203ENST00000475775 NCOA3Q9Y6Q9 1424 aa22.55■■□□□ 1.2
TRIM11-203ENST00000475775 TMEM131LA2VDJ0 1609 aa22.54■■□□□ 1.2
TRIM11-203ENST00000475775 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.54■■□□□ 1.2
TRIM11-203ENST00000475775 NUTM2BA6NNL0 878 aaPredicted RBP22.53■■□□□ 1.2
TRIM11-203ENST00000475775 NUTM2EB1AL46 878 aaPredicted RBP22.53■■□□□ 1.2
TRIM11-203ENST00000475775 CADPS2Q86UW7 1296 aa22.53■■□□□ 1.2
TRIM11-203ENST00000475775 NUTM2AQ8IVF1 878 aaPredicted RBP22.53■■□□□ 1.2
TRIM11-203ENST00000475775 CDK12Q9NYV4 1490 aaPredicted RBP22.53■■□□□ 1.2
TRIM11-203ENST00000475775 E9PCH4 1651 aa22.52■■□□□ 1.2
TRIM11-203ENST00000475775 TBX22Q9Y458 520 aa22.52■■□□□ 1.2
TRIM11-203ENST00000475775 NUP155O75694 1391 aa22.51■■□□□ 1.19
TRIM11-203ENST00000475775 CHGAP10645 457 aaKnown RBP22.51■■□□□ 1.19
TRIM11-203ENST00000475775 ATF3P18847 181 aa22.51■■□□□ 1.19
TRIM11-203ENST00000475775 ITGAEP38570 1179 aa22.51■■□□□ 1.19
TRIM11-203ENST00000475775 C19orf44Q9H6X5 657 aa22.51■■□□□ 1.19
TRIM11-203ENST00000475775 DIP2AQ14689 1571 aa22.49■■□□□ 1.19
TRIM11-203ENST00000475775 AFF2P51816 1311 aa22.48■■□□□ 1.19
TRIM11-203ENST00000475775 BRINP3Q76B58 766 aa22.45■■□□□ 1.18
TRIM11-203ENST00000475775 PIK3R4Q99570 1358 aa22.44■■□□□ 1.18
TRIM11-203ENST00000475775 NUTM2DQ5VT03 806 aaPredicted RBP22.43■■□□□ 1.18
TRIM11-203ENST00000475775 ADAMTS13Q76LX8 1427 aa22.42■■□□□ 1.18
TRIM11-203ENST00000475775 QTRT2Q9H974 415 aaKnown RBP22.41■■□□□ 1.18
TRIM11-203ENST00000475775 RBM6P78332 1123 aaKnown RBP22.4■■□□□ 1.18
TRIM11-203ENST00000475775 PPARGC1BQ86YN6 1023 aaKnown RBP22.4■■□□□ 1.18
TRIM11-203ENST00000475775 RGS12O14924 1447 aa22.4■■□□□ 1.18
TRIM11-203ENST00000475775 RRBP1Q9P2E9 1410 aaKnown RBP22.4■■□□□ 1.18
TRIM11-203ENST00000475775 NHSL1Q5SYE7 1610 aa22.39■■□□□ 1.18
TRIM11-203ENST00000475775 TRPM2O94759 1503 aa22.39■■□□□ 1.17
TRIM11-203ENST00000475775 AMOTL2Q9Y2J4 779 aa22.38■■□□□ 1.17
TRIM11-203ENST00000475775 SETD5Q9C0A6 1442 aa22.38■■□□□ 1.17
TRIM11-203ENST00000475775 C8orf37Q96NL8 207 aa22.37■■□□□ 1.17
TRIM11-203ENST00000475775 SPHKAPQ2M3C7 1700 aa22.37■■□□□ 1.17
TRIM11-203ENST00000475775 ASXL1Q8IXJ9 1541 aa22.36■■□□□ 1.17
TRIM11-203ENST00000475775 LRRC59Q96AG4 307 aaKnown RBP22.36■■□□□ 1.17
TRIM11-203ENST00000475775 PTPRUQ92729 1446 aa22.34■■□□□ 1.17
TRIM11-203ENST00000475775 EP400Q96L91 3159 aa22.34■■□□□ 1.17
TRIM11-203ENST00000475775 DCCP43146 1447 aa22.31■■□□□ 1.16
TRIM11-203ENST00000475775 SETBP1Q9Y6X0 1596 aa22.31■■□□□ 1.16
TRIM11-203ENST00000475775 ZNF326Q5BKZ1 582 aaKnown RBP22.31■■□□□ 1.16
TRIM11-203ENST00000475775 MST1RQ04912 1400 aa22.31■■□□□ 1.16
TRIM11-203ENST00000475775 NAIPQ13075 1403 aa22.31■■□□□ 1.16
TRIM11-203ENST00000475775 DDX17Q92841 729 aaKnown RBP22.3■■□□□ 1.16
TRIM11-203ENST00000475775 NGLY1Q96IV0 654 aa22.3■■□□□ 1.16
TRIM11-203ENST00000475775 ATAD2Q6PL18 1390 aa22.27■■□□□ 1.16
TRIM11-203ENST00000475775 PNPLA6Q8IY17 1366 aa22.27■■□□□ 1.16
TRIM11-203ENST00000475775 ADAMTS2O95450 1211 aa22.27■■□□□ 1.16
TRIM11-203ENST00000475775 XRN1Q8IZH2 1706 aaKnown RBP22.27■■□□□ 1.16
TRIM11-203ENST00000475775 HFM1A2PYH4 1435 aa22.26■■□□□ 1.15
TRIM11-203ENST00000475775 ZRANB1Q9UGI0 708 aa22.26■■□□□ 1.15
TRIM11-203ENST00000475775 CLTCL1P53675 1640 aa22.25■■□□□ 1.15
TRIM11-203ENST00000475775 NRXN3Q9Y4C0 1643 aa22.25■■□□□ 1.15
TRIM11-203ENST00000475775 FOXD1Q16676 465 aa22.25■■□□□ 1.15
TRIM11-203ENST00000475775 NEXMIFQ5QGS0 1516 aa22.23■■□□□ 1.15
TRIM11-203ENST00000475775 NALCNQ8IZF0 1738 aa22.21■■□□□ 1.15
TRIM11-203ENST00000475775 USP21Q9UK80 565 aa22.21■■□□□ 1.15
TRIM11-203ENST00000475775 TRPC5Q9UL62 973 aaPredicted RBP22.19■■□□□ 1.14
TRIM11-203ENST00000475775 KIF1BO60333 1816 aa22.18■■□□□ 1.14
TRIM11-203ENST00000475775 METP08581 1390 aa22.18■■□□□ 1.14
TRIM11-203ENST00000475775 ADGRL3Q9HAR2 1447 aa22.16■■□□□ 1.14
TRIM11-203ENST00000475775 VGFO15240 615 aaPredicted RBP22.16■■□□□ 1.14
TRIM11-203ENST00000475775 SLC4A1APQ9BWU0 796 aaKnown RBP22.16■■□□□ 1.14
TRIM11-203ENST00000475775 LAMC1P11047 1609 aa22.15■■□□□ 1.14
TRIM11-203ENST00000475775 FNBP4Q8N3X1 1017 aaPredicted RBP22.14■■□□□ 1.13
TRIM11-203ENST00000475775 RPGRIP1LQ68CZ1 1315 aa22.13■■□□□ 1.13
TRIM11-203ENST00000475775 CCDC125Q86Z20 511 aa22.13■■□□□ 1.13
TRIM11-203ENST00000475775 C1orf167Q5SNV9 1468 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms