RNA–Protein interactions for RNA: ENST00000475573.5

NME1-206, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3

Gene NME1, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-206ENST00000475573 PTPN23Q9H3S7 1636 aa24.07■■□□□ 1.44
NME1-206ENST00000475573 SPATA31A6Q5VVP1 1343 aa24.07■■□□□ 1.44
NME1-206ENST00000475573 LRP6O75581 1613 aa24.06■■□□□ 1.44
NME1-206ENST00000475573 DAPK1P53355 1430 aa24.06■■□□□ 1.44
NME1-206ENST00000475573 BCANQ96GW7 911 aa24.05■■□□□ 1.44
NME1-206ENST00000475573 SLC52A1Q9NWF4 448 aa24.05■■□□□ 1.44
NME1-206ENST00000475573 ZNF772Q68DY9 489 aaPredicted RBP24.04■■□□□ 1.44
NME1-206ENST00000475573 UPF1Q92900 1129 aaKnown RBP eCLIP24.04■■□□□ 1.44
NME1-206ENST00000475573 PLEKHG1Q9ULL1 1385 aa24.03■■□□□ 1.44
NME1-206ENST00000475573 ZFYVE9O95405 1425 aa24.03■■□□□ 1.44
NME1-206ENST00000475573 NCOA3Q9Y6Q9 1424 aa24.03■■□□□ 1.44
NME1-206ENST00000475573 SHPRHQ149N8 1683 aa24.02■■□□□ 1.44
NME1-206ENST00000475573 AHDC1Q5TGY3 1603 aaPredicted RBP24.02■■□□□ 1.44
NME1-206ENST00000475573 ANKRD30AQ9BXX3 1397 aa24.02■■□□□ 1.44
NME1-206ENST00000475573 MEX3CQ5U5Q3 659 aaKnown RBP24.01■■□□□ 1.43
NME1-206ENST00000475573 MYO5BQ9ULV0 1848 aa24■■□□□ 1.43
NME1-206ENST00000475573 RPRD2Q5VT52 1461 aaKnown RBP24■■□□□ 1.43
NME1-206ENST00000475573 GCC2Q8IWJ2 1684 aa23.98■■□□□ 1.43
NME1-206ENST00000475573 TRIM52Q96A61 297 aa23.97■■□□□ 1.43
NME1-206ENST00000475573 RIMS2Q9UQ26 1411 aa23.96■■□□□ 1.43
NME1-206ENST00000475573 PPP1R15AO75807 674 aaPredicted RBP23.96■■□□□ 1.43
NME1-206ENST00000475573 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.96■■□□□ 1.43
NME1-206ENST00000475573 HDGFP51858 240 aaKnown RBP23.95■■□□□ 1.42
NME1-206ENST00000475573 TMEM131LA2VDJ0 1609 aa23.95■■□□□ 1.42
NME1-206ENST00000475573 CDK12Q9NYV4 1490 aaPredicted RBP23.94■■□□□ 1.42
NME1-206ENST00000475573 CADPS2Q86UW7 1296 aa23.94■■□□□ 1.42
NME1-206ENST00000475573 C14orf37Q86TY3 774 aa23.93■■□□□ 1.42
NME1-206ENST00000475573 TBX22Q9Y458 520 aa23.93■■□□□ 1.42
NME1-206ENST00000475573 DIP2AQ14689 1571 aa23.93■■□□□ 1.42
NME1-206ENST00000475573 RXRBP28702 533 aa23.91■■□□□ 1.42
NME1-206ENST00000475573 CHIC2Q9UKJ5 165 aa23.91■■□□□ 1.42
NME1-206ENST00000475573 ADGRL2O95490 1459 aa23.9■■□□□ 1.42
NME1-206ENST00000475573 C19orf44Q9H6X5 657 aa23.9■■□□□ 1.42
NME1-206ENST00000475573 PIK3R4Q99570 1358 aa23.9■■□□□ 1.42
NME1-206ENST00000475573 ATF3P18847 181 aa23.89■■□□□ 1.41
NME1-206ENST00000475573 ADAMTS13Q76LX8 1427 aa23.88■■□□□ 1.41
NME1-206ENST00000475573 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.88■■□□□ 1.41
NME1-206ENST00000475573 DCCP43146 1447 aa23.84■■□□□ 1.41
NME1-206ENST00000475573 BRINP3Q76B58 766 aa23.83■■□□□ 1.41
NME1-206ENST00000475573 TRPM2O94759 1503 aa23.83■■□□□ 1.41
NME1-206ENST00000475573 ANKRD50Q9ULJ7 1429 aa23.83■■□□□ 1.4
NME1-206ENST00000475573 SRCAPQ6ZRS2 3230 aa23.82■■□□□ 1.4
NME1-206ENST00000475573 ASXL1Q8IXJ9 1541 aa23.81■■□□□ 1.4
NME1-206ENST00000475573 NUTM2BA6NNL0 878 aaPredicted RBP23.81■■□□□ 1.4
NME1-206ENST00000475573 NUTM2EB1AL46 878 aaPredicted RBP23.81■■□□□ 1.4
NME1-206ENST00000475573 NUTM2AQ8IVF1 878 aaPredicted RBP23.81■■□□□ 1.4
NME1-206ENST00000475573 AFF2P51816 1311 aa23.81■■□□□ 1.4
NME1-206ENST00000475573 SETD5Q9C0A6 1442 aa23.8■■□□□ 1.4
NME1-206ENST00000475573 APLP2Q06481 763 aa23.79■■□□□ 1.4
NME1-206ENST00000475573 NHSL1Q5SYE7 1610 aa23.79■■□□□ 1.4
NME1-206ENST00000475573 UNC13BO14795 1591 aa23.78■■□□□ 1.4
NME1-206ENST00000475573 RGS12O14924 1447 aa23.77■■□□□ 1.4
NME1-206ENST00000475573 CHGAP10645 457 aaKnown RBP23.77■■□□□ 1.4
NME1-206ENST00000475573 E9PCH4 1651 aa23.76■■□□□ 1.39
NME1-206ENST00000475573 PTPRUQ92729 1446 aa23.76■■□□□ 1.39
NME1-206ENST00000475573 NUTM2DQ5VT03 806 aaPredicted RBP23.75■■□□□ 1.39
NME1-206ENST00000475573 AMOTL2Q9Y2J4 779 aa23.75■■□□□ 1.39
NME1-206ENST00000475573 XRN1Q8IZH2 1706 aaKnown RBP23.75■■□□□ 1.39
NME1-206ENST00000475573 LOC105371045A0A1W2PR82 267 aa23.74■■□□□ 1.39
NME1-206ENST00000475573 MST1RQ04912 1400 aa23.73■■□□□ 1.39
NME1-206ENST00000475573 RBM6P78332 1123 aaKnown RBP23.72■■□□□ 1.39
NME1-206ENST00000475573 LRRC59Q96AG4 307 aaKnown RBP23.71■■□□□ 1.39
NME1-206ENST00000475573 C8orf37Q96NL8 207 aa23.69■■□□□ 1.38
NME1-206ENST00000475573 NRXN3Q9Y4C0 1643 aa23.69■■□□□ 1.38
NME1-206ENST00000475573 SETBP1Q9Y6X0 1596 aa23.69■■□□□ 1.38
NME1-206ENST00000475573 PNPLA6Q8IY17 1366 aa23.68■■□□□ 1.38
NME1-206ENST00000475573 QTRT2Q9H974 415 aaKnown RBP23.68■■□□□ 1.38
NME1-206ENST00000475573 IQGAP3Q86VI3 1631 aa23.68■■□□□ 1.38
NME1-206ENST00000475573 FAM50AQ14320 339 aaKnown RBP23.65■■□□□ 1.38
NME1-206ENST00000475573 ATAD2Q6PL18 1390 aa23.64■■□□□ 1.37
NME1-206ENST00000475573 ADGRL3Q9HAR2 1447 aa23.63■■□□□ 1.37
NME1-206ENST00000475573 NGLY1Q96IV0 654 aa23.62■■□□□ 1.37
NME1-206ENST00000475573 NALCNQ8IZF0 1738 aa23.61■■□□□ 1.37
NME1-206ENST00000475573 LAMC1P11047 1609 aa23.59■■□□□ 1.37
NME1-206ENST00000475573 DDX17Q92841 729 aaKnown RBP23.59■■□□□ 1.37
NME1-206ENST00000475573 FOXD1Q16676 465 aa23.58■■□□□ 1.37
NME1-206ENST00000475573 METP08581 1390 aa23.57■■□□□ 1.36
NME1-206ENST00000475573 ADAMTS2O95450 1211 aa23.56■■□□□ 1.36
NME1-206ENST00000475573 EP400Q96L91 3159 aa23.56■■□□□ 1.36
NME1-206ENST00000475573 ROCK1Q13464 1354 aa23.55■■□□□ 1.36
NME1-206ENST00000475573 SPHKAPQ2M3C7 1700 aa23.55■■□□□ 1.36
NME1-206ENST00000475573 C1orf167Q5SNV9 1468 aa23.54■■□□□ 1.36
NME1-206ENST00000475573 NUP155O75694 1391 aa23.53■■□□□ 1.36
NME1-206ENST00000475573 PTCH1Q13635 1447 aa23.52■■□□□ 1.36
NME1-206ENST00000475573 ZRANB1Q9UGI0 708 aa23.52■■□□□ 1.36
NME1-206ENST00000475573 USP21Q9UK80 565 aa23.52■■□□□ 1.36
NME1-206ENST00000475573 TRPC5Q9UL62 973 aaPredicted RBP23.52■■□□□ 1.36
NME1-206ENST00000475573 SOS2Q07890 1332 aaPredicted RBP23.5■■□□□ 1.35
NME1-206ENST00000475573 ATRNO75882 1429 aa23.5■■□□□ 1.35
NME1-206ENST00000475573 ZNF326Q5BKZ1 582 aaKnown RBP23.49■■□□□ 1.35
NME1-206ENST00000475573 FNBP4Q8N3X1 1017 aaPredicted RBP23.49■■□□□ 1.35
NME1-206ENST00000475573 COL22A1Q8NFW1 1626 aaPredicted RBP23.48■■□□□ 1.35
NME1-206ENST00000475573 NEXMIFQ5QGS0 1516 aa23.48■■□□□ 1.35
NME1-206ENST00000475573 CCDC125Q86Z20 511 aa23.44■■□□□ 1.34
NME1-206ENST00000475573 MYOM2P54296 1465 aa23.42■■□□□ 1.34
NME1-206ENST00000475573 PRAG1Q86YV5 1406 aa23.42■■□□□ 1.34
NME1-206ENST00000475573 CLTCL1P53675 1640 aa23.41■■□□□ 1.34
NME1-206ENST00000475573 ORAI2Q96SN7 254 aa23.41■■□□□ 1.34
NME1-206ENST00000475573 MARF1Q9Y4F3 1742 aaKnown RBP23.41■■□□□ 1.34
NME1-206ENST00000475573 ROBO2Q9HCK4 1378 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms