RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 NEUROD1Q13562 356 aa21.92■■□□□ 1.1
MCF2L-224ENST00000475524 CHGAP10645 457 aaKnown RBP21.9■■□□□ 1.1
MCF2L-224ENST00000475524 HDGFP51858 240 aaKnown RBP21.89■■□□□ 1.09
MCF2L-224ENST00000475524 RIMS2Q9UQ26 1411 aa21.89■■□□□ 1.09
MCF2L-224ENST00000475524 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.88■■□□□ 1.09
MCF2L-224ENST00000475524 POLR1AO95602 1720 aaPredicted RBP21.88■■□□□ 1.09
MCF2L-224ENST00000475524 NRXN1Q9ULB1 1477 aa21.86■■□□□ 1.09
MCF2L-224ENST00000475524 ZNF326Q5BKZ1 582 aaKnown RBP21.86■■□□□ 1.09
MCF2L-224ENST00000475524 RGL3Q3MIN7 710 aa21.85■■□□□ 1.09
MCF2L-224ENST00000475524 L3MBTL2Q969R5 705 aa21.85■■□□□ 1.09
MCF2L-224ENST00000475524 SCAF11Q99590 1463 aaKnown RBP21.84■■□□□ 1.09
MCF2L-224ENST00000475524 VGFO15240 615 aaPredicted RBP21.84■■□□□ 1.09
MCF2L-224ENST00000475524 LAMC1P11047 1609 aa21.82■■□□□ 1.08
MCF2L-224ENST00000475524 ZEB1P37275 1124 aaPredicted RBP21.82■■□□□ 1.08
MCF2L-224ENST00000475524 EID1Q9Y6B2 187 aa21.82■■□□□ 1.08
MCF2L-224ENST00000475524 KIAA1210Q9ULL0 1709 aa21.81■■□□□ 1.08
MCF2L-224ENST00000475524 MED14O60244 1454 aa21.81■■□□□ 1.08
MCF2L-224ENST00000475524 SETBP1Q9Y6X0 1596 aa21.81■■□□□ 1.08
MCF2L-224ENST00000475524 DCAF11Q8TEB1 546 aa21.8■■□□□ 1.08
MCF2L-224ENST00000475524 PLEKHG1Q9ULL1 1385 aa21.79■■□□□ 1.08
MCF2L-224ENST00000475524 ANKLE2Q86XL3 938 aa21.79■■□□□ 1.08
MCF2L-224ENST00000475524 PIK3C2GO75747 1445 aa21.79■■□□□ 1.08
MCF2L-224ENST00000475524 PRAG1Q86YV5 1406 aa21.78■■□□□ 1.08
MCF2L-224ENST00000475524 DIP2AQ14689 1571 aa21.78■■□□□ 1.08
MCF2L-224ENST00000475524 TXNDC2Q86VQ3 553 aa21.76■■□□□ 1.07
MCF2L-224ENST00000475524 NRXN3Q9Y4C0 1643 aa21.76■■□□□ 1.07
MCF2L-224ENST00000475524 IQGAP1P46940 1657 aa21.75■■□□□ 1.07
MCF2L-224ENST00000475524 STRCQ7RTU9 1775 aa21.75■■□□□ 1.07
MCF2L-224ENST00000475524 PPP1R15AO75807 674 aaPredicted RBP21.75■■□□□ 1.07
MCF2L-224ENST00000475524 LTKP29376 864 aa21.75■■□□□ 1.07
MCF2L-224ENST00000475524 TRPM1Q7Z4N2 1603 aa21.74■■□□□ 1.07
MCF2L-224ENST00000475524 AEBP2Q6ZN18 517 aaPredicted RBP21.74■■□□□ 1.07
MCF2L-224ENST00000475524 SETD1AO15047 1707 aaKnown RBP21.73■■□□□ 1.07
MCF2L-224ENST00000475524 ADGRF5Q8IZF2 1346 aa21.73■■□□□ 1.07
MCF2L-224ENST00000475524 KDM2AQ9Y2K7 1162 aa21.71■■□□□ 1.07
MCF2L-224ENST00000475524 NPHP4O75161 1426 aaPredicted RBP21.71■■□□□ 1.07
MCF2L-224ENST00000475524 ALKQ9UM73 1620 aa21.7■■□□□ 1.06
MCF2L-224ENST00000475524 RALGAPBQ86X10 1494 aa21.7■■□□□ 1.06
MCF2L-224ENST00000475524 HSPA2P54652 639 aa21.69■■□□□ 1.06
MCF2L-224ENST00000475524 ADAMTS13Q76LX8 1427 aa21.68■■□□□ 1.06
MCF2L-224ENST00000475524 C14orf93Q9H972 538 aaKnown RBP21.67■■□□□ 1.06
MCF2L-224ENST00000475524 PIK3R4Q99570 1358 aa21.65■■□□□ 1.06
MCF2L-224ENST00000475524 NUTM2DQ5VT03 806 aaPredicted RBP21.65■■□□□ 1.06
MCF2L-224ENST00000475524 TBX22Q9Y458 520 aa21.65■■□□□ 1.06
MCF2L-224ENST00000475524 GPRASP1Q5JY77 1395 aa21.64■■□□□ 1.06
MCF2L-224ENST00000475524 NCKAP5LQ9HCH0 1330 aa21.64■■□□□ 1.05
MCF2L-224ENST00000475524 NBPF8Q3BBV2 869 aa21.64■■□□□ 1.05
MCF2L-224ENST00000475524 ADGRB1O14514 1584 aa21.64■■□□□ 1.05
MCF2L-224ENST00000475524 DMRT2Q9Y5R5 561 aa21.63■■□□□ 1.05
MCF2L-224ENST00000475524 ASXL1Q8IXJ9 1541 aa21.61■■□□□ 1.05
MCF2L-224ENST00000475524 KNDC1Q76NI1 1749 aa21.61■■□□□ 1.05
MCF2L-224ENST00000475524 CFAP70Q5T0N1 1121 aa21.59■■□□□ 1.05
MCF2L-224ENST00000475524 CHD2O14647 1828 aaKnown RBP21.59■■□□□ 1.05
MCF2L-224ENST00000475524 NWD1Q149M9 1564 aa21.58■■□□□ 1.05
MCF2L-224ENST00000475524 BCANQ96GW7 911 aa21.58■■□□□ 1.05
MCF2L-224ENST00000475524 ROCK2O75116 1388 aaKnown RBP21.58■■□□□ 1.04
MCF2L-224ENST00000475524 XRN1Q8IZH2 1706 aaKnown RBP21.57■■□□□ 1.04
MCF2L-224ENST00000475524 TECPR2O15040 1411 aa21.55■■□□□ 1.04
MCF2L-224ENST00000475524 DLC1Q96QB1 1528 aa21.55■■□□□ 1.04
MCF2L-224ENST00000475524 METP08581 1390 aa21.54■■□□□ 1.04
MCF2L-224ENST00000475524 LRPPRCP42704 1394 aaKnown RBP21.54■■□□□ 1.04
MCF2L-224ENST00000475524 SLC26A8Q96RN1 970 aa21.54■■□□□ 1.04
MCF2L-224ENST00000475524 CPS1P31327 1500 aa21.54■■□□□ 1.04
MCF2L-224ENST00000475524 YTHDC2Q9H6S0 1430 aaKnown RBP21.54■■□□□ 1.04
MCF2L-224ENST00000475524 ABCC11Q96J66 1382 aa21.52■■□□□ 1.04
MCF2L-224ENST00000475524 ARHGEF28Q8N1W1 1705 aaKnown RBP21.52■■□□□ 1.03
MCF2L-224ENST00000475524 NBPF1Q3BBV0 1214 aa21.51■■□□□ 1.03
MCF2L-224ENST00000475524 PTCH1Q13635 1447 aa21.51■■□□□ 1.03
MCF2L-224ENST00000475524 NKTRP30414 1462 aaKnown RBP21.51■■□□□ 1.03
MCF2L-224ENST00000475524 SIRT1Q96EB6 747 aa21.49■■□□□ 1.03
MCF2L-224ENST00000475524 CARD11Q9BXL7 1154 aa21.49■■□□□ 1.03
MCF2L-224ENST00000475524 EIF3AQ14152 1382 aaKnown RBP21.48■■□□□ 1.03
MCF2L-224ENST00000475524 FAM135BQ49AJ0 1406 aa21.48■■□□□ 1.03
MCF2L-224ENST00000475524 PTPRUQ92729 1446 aa21.48■■□□□ 1.03
MCF2L-224ENST00000475524 KCNA6P17658 529 aa21.47■■□□□ 1.03
MCF2L-224ENST00000475524 TMEM132EQ6IEE7 984 aa21.46■■□□□ 1.03
MCF2L-224ENST00000475524 STRCP1A6NGW2 1772 aa21.45■■□□□ 1.02
MCF2L-224ENST00000475524 SENP3Q9H4L4 574 aaPredicted RBP21.43■■□□□ 1.02
MCF2L-224ENST00000475524 AMOTL2Q9Y2J4 779 aa21.43■■□□□ 1.02
MCF2L-224ENST00000475524 USP47Q96K76 1375 aa21.43■■□□□ 1.02
MCF2L-224ENST00000475524 SBNO2Q9Y2G9 1366 aa21.42■■□□□ 1.02
MCF2L-224ENST00000475524 NCOA3Q9Y6Q9 1424 aa21.41■■□□□ 1.02
MCF2L-224ENST00000475524 QRICH2Q9H0J4 1663 aa21.4■■□□□ 1.02
MCF2L-224ENST00000475524 EIF4G2P78344 907 aaKnown RBP eCLIP21.4■■□□□ 1.02
MCF2L-224ENST00000475524 SLC24A1O60721 1099 aa21.39■■□□□ 1.01
MCF2L-224ENST00000475524 TRAK1Q9UPV9 953 aa21.39■■□□□ 1.01
MCF2L-224ENST00000475524 ROBO2Q9HCK4 1378 aa21.38■■□□□ 1.01
MCF2L-224ENST00000475524 ADGRB2O60241 1585 aa21.37■■□□□ 1.01
MCF2L-224ENST00000475524 STK26Q9P289 416 aa21.37■■□□□ 1.01
MCF2L-224ENST00000475524 CENPJQ9HC77 1338 aaPredicted RBP21.36■■□□□ 1.01
MCF2L-224ENST00000475524 LTBP4Q8N2S1 1624 aa21.36■■□□□ 1.01
MCF2L-224ENST00000475524 ZNF335Q9H4Z2 1342 aaPredicted RBP21.34■■□□□ 1.01
MCF2L-224ENST00000475524 PRAM1Q96QH2 718 aa21.33■■□□□ 1.01
MCF2L-224ENST00000475524 NALCNQ8IZF0 1738 aa21.32■■□□□ 1
MCF2L-224ENST00000475524 XIRP1Q702N8 1843 aaKnown RBP21.32■■□□□ 1
MCF2L-224ENST00000475524 POGKQ9P215 609 aa21.32■■□□□ 1
MCF2L-224ENST00000475524 LRRC7Q96NW7 1537 aa21.32■■□□□ 1
MCF2L-224ENST00000475524 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.32■■□□□ 1
MCF2L-224ENST00000475524 ADGRL3Q9HAR2 1447 aa21.31■■□□□ 1
MCF2L-224ENST00000475524 HSPA5P11021 654 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms