RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 ZNF592Q92610 1267 aa17.42■□□□□ 0.38
SSPO-205ENST00000475488 ANO2Q9NQ90 1003 aa17.41■□□□□ 0.38
SSPO-205ENST00000475488 ANKRD30AQ9BXX3 1397 aa17.4■□□□□ 0.38
SSPO-205ENST00000475488 NECTIN2Q92692 538 aa17.4■□□□□ 0.38
SSPO-205ENST00000475488 TRAK1Q9UPV9 953 aa17.4■□□□□ 0.38
SSPO-205ENST00000475488 DDX58O95786 925 aaKnown RBP17.39■□□□□ 0.37
SSPO-205ENST00000475488 RUFY1Q96T51 708 aa17.39■□□□□ 0.37
SSPO-205ENST00000475488 SETD5Q9C0A6 1442 aa17.39■□□□□ 0.37
SSPO-205ENST00000475488 WASHC2AQ641Q2 1341 aa17.39■□□□□ 0.37
SSPO-205ENST00000475488 IFIT2P09913 472 aaKnown RBP17.39■□□□□ 0.37
SSPO-205ENST00000475488 CARMIL1Q5VZK9 1371 aa17.39■□□□□ 0.37
SSPO-205ENST00000475488 SF3B2Q13435 895 aaKnown RBP17.38■□□□□ 0.37
SSPO-205ENST00000475488 DDX11L8A8MPP1 907 aa17.37■□□□□ 0.37
SSPO-205ENST00000475488 RDXP35241 583 aaKnown RBP17.37■□□□□ 0.37
SSPO-205ENST00000475488 RRP7AQ9Y3A4 280 aaKnown RBP17.36■□□□□ 0.37
SSPO-205ENST00000475488 HNRNPMP52272 730 aaKnown RBP eCLIP17.36■□□□□ 0.37
SSPO-205ENST00000475488 AK7Q96M32 723 aa17.36■□□□□ 0.37
SSPO-205ENST00000475488 MTMR7Q9Y216 660 aa17.36■□□□□ 0.37
SSPO-205ENST00000475488 ELL2O00472 640 aaPredicted RBP17.35■□□□□ 0.37
SSPO-205ENST00000475488 SLC4A3P48751 1232 aa17.35■□□□□ 0.37
SSPO-205ENST00000475488 FOSBP53539 338 aa17.35■□□□□ 0.37
SSPO-205ENST00000475488 CCER2I3L3R5 266 aa17.35■□□□□ 0.37
SSPO-205ENST00000475488 ATF3P18847 181 aa17.35■□□□□ 0.37
SSPO-205ENST00000475488 HOMER1Q86YM7 354 aa17.35■□□□□ 0.37
SSPO-205ENST00000475488 SAFBQ15424 915 aaKnown RBP eCLIP17.35■□□□□ 0.37
SSPO-205ENST00000475488 ZKSCAN1P17029 563 aaPredicted RBP17.34■□□□□ 0.37
SSPO-205ENST00000475488 CDR1P51861 262 aa17.34■□□□□ 0.37
SSPO-205ENST00000475488 BRMS1Q9HCU9 246 aa17.34■□□□□ 0.37
SSPO-205ENST00000475488 PRDM2Q13029 1718 aa17.34■□□□□ 0.37
SSPO-205ENST00000475488 TNIKQ9UKE5 1360 aa17.34■□□□□ 0.37
SSPO-205ENST00000475488 NACADO15069 1562 aa17.34■□□□□ 0.37
SSPO-205ENST00000475488 G3BP1Q13283 466 aaKnown RBP eCLIP17.32■□□□□ 0.36
SSPO-205ENST00000475488 RNF20Q5VTR2 975 aa17.32■□□□□ 0.36
SSPO-205ENST00000475488 MPHOSPH9Q99550 1183 aa17.32■□□□□ 0.36
SSPO-205ENST00000475488 BICD2Q8TD16 824 aa17.32■□□□□ 0.36
SSPO-205ENST00000475488 CCDC173Q0VFZ6 552 aa17.31■□□□□ 0.36
SSPO-205ENST00000475488 PLIN1O60240 522 aa17.31■□□□□ 0.36
SSPO-205ENST00000475488 UACAQ9BZF9 1416 aa17.31■□□□□ 0.36
SSPO-205ENST00000475488 TEX35Q5T0J7 233 aa17.3■□□□□ 0.36
SSPO-205ENST00000475488 OFD1O75665 1012 aa17.3■□□□□ 0.36
SSPO-205ENST00000475488 DDX49Q9Y6V7 483 aaKnown RBP17.3■□□□□ 0.36
SSPO-205ENST00000475488 ZNF771Q7L3S4 317 aaPredicted RBP17.29■□□□□ 0.36
SSPO-205ENST00000475488 EVC2Q86UK5 1308 aa17.29■□□□□ 0.36
SSPO-205ENST00000475488 XBP1P17861 261 aa17.28■□□□□ 0.36
SSPO-205ENST00000475488 CGNL1Q0VF96 1302 aa17.28■□□□□ 0.36
SSPO-205ENST00000475488 MYO6Q9UM54 1294 aa17.28■□□□□ 0.36
SSPO-205ENST00000475488 RIC3Q7Z5B4 369 aa17.27■□□□□ 0.36
SSPO-205ENST00000475488 PHLDB1Q86UU1 1377 aa17.27■□□□□ 0.35
SSPO-205ENST00000475488 SASS6Q6UVJ0 657 aa17.27■□□□□ 0.35
SSPO-205ENST00000475488 RALYLQ86SE5 291 aaKnown RBP17.26■□□□□ 0.35
SSPO-205ENST00000475488 RBM19Q9Y4C8 960 aaKnown RBP17.26■□□□□ 0.35
SSPO-205ENST00000475488 ROCK1Q13464 1354 aa17.26■□□□□ 0.35
SSPO-205ENST00000475488 SYCP1Q15431 976 aa17.26■□□□□ 0.35
SSPO-205ENST00000475488 WASHC4Q2M389 1173 aa17.26■□□□□ 0.35
SSPO-205ENST00000475488 VSIG10Q8N0Z9 540 aa17.26■□□□□ 0.35
SSPO-205ENST00000475488 BCL2L13Q9BXK5 485 aa17.26■□□□□ 0.35
SSPO-205ENST00000475488 NEUROD6Q96NK8 337 aa17.25■□□□□ 0.35
SSPO-205ENST00000475488 OLFM4Q6UX06 510 aa17.25■□□□□ 0.35
SSPO-205ENST00000475488 CDK5RAP3Q96JB5 506 aa17.25■□□□□ 0.35
SSPO-205ENST00000475488 MAP7D2Q96T17 732 aa17.24■□□□□ 0.35
SSPO-205ENST00000475488 CAGE1Q8TC20 777 aa17.24■□□□□ 0.35
SSPO-205ENST00000475488 SKOR2Q2VWA4 1001 aaPredicted RBP17.24■□□□□ 0.35
SSPO-205ENST00000475488 KDM4AO75164 1064 aa17.24■□□□□ 0.35
SSPO-205ENST00000475488 RAPGEF4Q8WZA2 1011 aa17.24■□□□□ 0.35
SSPO-205ENST00000475488 REC8O95072 547 aa17.24■□□□□ 0.35
SSPO-205ENST00000475488 KIF6Q6ZMV9 814 aa17.24■□□□□ 0.35
SSPO-205ENST00000475488 TIMELESSQ9UNS1 1208 aa17.23■□□□□ 0.35
SSPO-205ENST00000475488 MINK1Q8N4C8 1332 aaPredicted RBP17.23■□□□□ 0.35
SSPO-205ENST00000475488 AIMP1Q12904 312 aaKnown RBP17.22■□□□□ 0.35
SSPO-205ENST00000475488 SLC3A2P08195 630 aaKnown RBP17.22■□□□□ 0.35
SSPO-205ENST00000475488 PPM1FP49593 454 aaPredicted RBP17.22■□□□□ 0.35
SSPO-205ENST00000475488 ZRSR2Q15696 482 aaKnown RBP17.22■□□□□ 0.35
SSPO-205ENST00000475488 SKIDA1Q1XH10 827 aa17.22■□□□□ 0.35
SSPO-205ENST00000475488 CCDC97Q96F63 343 aaPredicted RBP17.22■□□□□ 0.35
SSPO-205ENST00000475488 ACBD3Q9H3P7 528 aa17.22■□□□□ 0.35
SSPO-205ENST00000475488 ZKSCAN2Q63HK3 967 aa17.21■□□□□ 0.35
SSPO-205ENST00000475488 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.35
SSPO-205ENST00000475488 ATP2B2Q01814 1243 aa17.21■□□□□ 0.35
SSPO-205ENST00000475488 FAM177BA6PVY3 158 aa17.21■□□□□ 0.35
SSPO-205ENST00000475488 CCDC18Q5T9S5 1454 aa17.21■□□□□ 0.35
SSPO-205ENST00000475488 FKBP5Q13451 457 aaPredicted RBP17.21■□□□□ 0.35
SSPO-205ENST00000475488 KIF15Q9NS87 1388 aa17.21■□□□□ 0.35
SSPO-205ENST00000475488 VPS37CA5D8V6 355 aaPredicted RBP17.2■□□□□ 0.34
SSPO-205ENST00000475488 PDILTQ8N807 584 aa17.2■□□□□ 0.34
SSPO-205ENST00000475488 VGFO15240 615 aaPredicted RBP17.2■□□□□ 0.34
SSPO-205ENST00000475488 NEFHP12036 1026 aa17.2■□□□□ 0.34
SSPO-205ENST00000475488 SMC3Q9UQE7 1217 aa17.2■□□□□ 0.34
SSPO-205ENST00000475488 ERC2O15083 957 aa17.2■□□□□ 0.34
SSPO-205ENST00000475488 FMN1Q68DA7 1419 aa17.19■□□□□ 0.34
SSPO-205ENST00000475488 DCTN1Q14203 1278 aa17.19■□□□□ 0.34
SSPO-205ENST00000475488 IPO9Q96P70 1041 aaKnown RBP17.18■□□□□ 0.34
SSPO-205ENST00000475488 KRT18P05783 430 aaKnown RBP17.18■□□□□ 0.34
SSPO-205ENST00000475488 TTLL5Q6EMB2 1281 aa17.18■□□□□ 0.34
SSPO-205ENST00000475488 NLRP13Q86W25 1043 aa17.18■□□□□ 0.34
SSPO-205ENST00000475488 TSPYL4Q9UJ04 414 aa17.18■□□□□ 0.34
SSPO-205ENST00000475488 SOGA1O94964 1423 aa17.18■□□□□ 0.34
SSPO-205ENST00000475488 SART3Q15020 963 aaKnown RBP17.17■□□□□ 0.34
SSPO-205ENST00000475488 MAGEC2Q9UBF1 373 aaPredicted RBP17.17■□□□□ 0.34
SSPO-205ENST00000475488 CCDC73Q6ZRK6 1079 aa17.17■□□□□ 0.34
SSPO-205ENST00000475488 CYB5RLQ6IPT4 315 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms