RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 FAM9BQ8IZU0 186 aa21.02■□□□□ 0.95
RPUSD3-215ENST00000475470 ZC3H13Q5T200 1668 aaKnown RBP21.01■□□□□ 0.95
RPUSD3-215ENST00000475470 NOS1P29475 1434 aa20.99■□□□□ 0.95
RPUSD3-215ENST00000475470 CFAP70Q5T0N1 1121 aa20.99■□□□□ 0.95
RPUSD3-215ENST00000475470 ARHGAP31Q2M1Z3 1444 aa20.98■□□□□ 0.95
RPUSD3-215ENST00000475470 EIF3AQ14152 1382 aaKnown RBP20.98■□□□□ 0.95
RPUSD3-215ENST00000475470 SIGLEC1Q9BZZ2 1709 aa20.97■□□□□ 0.95
RPUSD3-215ENST00000475470 KTN1Q86UP2 1357 aaKnown RBP20.96■□□□□ 0.95
RPUSD3-215ENST00000475470 NRXN1Q9ULB1 1477 aa20.96■□□□□ 0.95
RPUSD3-215ENST00000475470 RPGRIP1LQ68CZ1 1315 aa20.95■□□□□ 0.94
RPUSD3-215ENST00000475470 RALBP1Q15311 655 aa20.95■□□□□ 0.94
RPUSD3-215ENST00000475470 SYNMO15061 1565 aa20.93■□□□□ 0.94
RPUSD3-215ENST00000475470 CDCA8Q53HL2 280 aa20.93■□□□□ 0.94
RPUSD3-215ENST00000475470 PPLO60437 1756 aa20.93■□□□□ 0.94
RPUSD3-215ENST00000475470 KIF13AQ9H1H9 1805 aa20.93■□□□□ 0.94
RPUSD3-215ENST00000475470 PIK3C2BO00750 1634 aa20.92■□□□□ 0.94
RPUSD3-215ENST00000475470 PER1O15534 1290 aaPredicted RBP20.92■□□□□ 0.94
RPUSD3-215ENST00000475470 PANK3Q9H999 370 aa20.92■□□□□ 0.94
RPUSD3-215ENST00000475470 MYBBP1AQ9BQG0 1328 aaKnown RBP20.91■□□□□ 0.94
RPUSD3-215ENST00000475470 REREQ9P2R6 1566 aa20.9■□□□□ 0.94
RPUSD3-215ENST00000475470 TMC1Q8TDI8 760 aa20.9■□□□□ 0.94
RPUSD3-215ENST00000475470 SUPT16HQ9Y5B9 1047 aaKnown RBP20.9■□□□□ 0.94
RPUSD3-215ENST00000475470 SLC52A1Q9NWF4 448 aa20.89■□□□□ 0.93
RPUSD3-215ENST00000475470 SLC24A1O60721 1099 aa20.88■□□□□ 0.93
RPUSD3-215ENST00000475470 IDI1Q13907 227 aa20.88■□□□□ 0.93
RPUSD3-215ENST00000475470 PIK3C2GO75747 1445 aa20.88■□□□□ 0.93
RPUSD3-215ENST00000475470 AGLP35573 1532 aa20.88■□□□□ 0.93
RPUSD3-215ENST00000475470 C14orf93Q9H972 538 aaKnown RBP20.87■□□□□ 0.93
RPUSD3-215ENST00000475470 SETBP1Q9Y6X0 1596 aa20.86■□□□□ 0.93
RPUSD3-215ENST00000475470 PREX1Q8TCU6 1659 aa20.86■□□□□ 0.93
RPUSD3-215ENST00000475470 VGFO15240 615 aaPredicted RBP20.86■□□□□ 0.93
RPUSD3-215ENST00000475470 PPP6R1Q9UPN7 881 aa20.86■□□□□ 0.93
RPUSD3-215ENST00000475470 BRD4O60885 1362 aaPredicted RBP20.86■□□□□ 0.93
RPUSD3-215ENST00000475470 PARD3Q8TEW0 1356 aa20.86■□□□□ 0.93
RPUSD3-215ENST00000475470 PNISRQ8TF01 805 aaKnown RBP20.84■□□□□ 0.93
RPUSD3-215ENST00000475470 ZBED9Q6R2W3 1325 aa20.83■□□□□ 0.93
RPUSD3-215ENST00000475470 CC2D1BQ5T0F9 858 aaKnown RBP20.83■□□□□ 0.93
RPUSD3-215ENST00000475470 NUTM2DQ5VT03 806 aaPredicted RBP20.83■□□□□ 0.92
RPUSD3-215ENST00000475470 NEXMIFQ5QGS0 1516 aa20.82■□□□□ 0.92
RPUSD3-215ENST00000475470 NEFLP07196 543 aa20.82■□□□□ 0.92
RPUSD3-215ENST00000475470 FBXO31Q5XUX0 539 aaPredicted RBP20.82■□□□□ 0.92
RPUSD3-215ENST00000475470 NLRP13Q86W25 1043 aa20.82■□□□□ 0.92
RPUSD3-215ENST00000475470 KDM5AP29375 1690 aaKnown RBP20.8■□□□□ 0.92
RPUSD3-215ENST00000475470 TRAK1Q9UPV9 953 aa20.8■□□□□ 0.92
RPUSD3-215ENST00000475470 MYO3AQ8NEV4 1616 aa20.8■□□□□ 0.92
RPUSD3-215ENST00000475470 KNSTRNQ9Y448 316 aa20.79■□□□□ 0.92
RPUSD3-215ENST00000475470 CENPJQ9HC77 1338 aaPredicted RBP20.79■□□□□ 0.92
RPUSD3-215ENST00000475470 ARHGEF40Q8TER5 1519 aa20.79■□□□□ 0.92
RPUSD3-215ENST00000475470 MLECQ14165 292 aa20.79■□□□□ 0.92
RPUSD3-215ENST00000475470 FKBP8Q14318 412 aa20.79■□□□□ 0.92
RPUSD3-215ENST00000475470 TMEM132EQ6IEE7 984 aa20.79■□□□□ 0.92
RPUSD3-215ENST00000475470 ADGRB1O14514 1584 aa20.79■□□□□ 0.92
RPUSD3-215ENST00000475470 ERVK-7P63135 1459 aa20.78■□□□□ 0.92
RPUSD3-215ENST00000475470 CLTCQ00610 1675 aaKnown RBP20.78■□□□□ 0.92
RPUSD3-215ENST00000475470 SBNO2Q9Y2G9 1366 aa20.77■□□□□ 0.92
RPUSD3-215ENST00000475470 TMEM131LA2VDJ0 1609 aa20.77■□□□□ 0.92
RPUSD3-215ENST00000475470 MYO5BQ9ULV0 1848 aa20.76■□□□□ 0.91
RPUSD3-215ENST00000475470 ZFYVE9O95405 1425 aa20.76■□□□□ 0.91
RPUSD3-215ENST00000475470 MYOM1P52179 1685 aa20.75■□□□□ 0.91
RPUSD3-215ENST00000475470 STAG3Q9UJ98 1225 aa20.74■□□□□ 0.91
RPUSD3-215ENST00000475470 LRPPRCP42704 1394 aaKnown RBP20.74■□□□□ 0.91
RPUSD3-215ENST00000475470 ESF1Q9H501 851 aaKnown RBP20.72■□□□□ 0.91
RPUSD3-215ENST00000475470 QRICH2Q9H0J4 1663 aa20.71■□□□□ 0.91
RPUSD3-215ENST00000475470 AMER1Q5JTC6 1135 aaPredicted RBP20.7■□□□□ 0.91
RPUSD3-215ENST00000475470 ASXL1Q8IXJ9 1541 aa20.7■□□□□ 0.9
RPUSD3-215ENST00000475470 SPATA31D1Q6ZQQ2 1576 aa20.69■□□□□ 0.9
RPUSD3-215ENST00000475470 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
RPUSD3-215ENST00000475470 BCANQ96GW7 911 aa20.67■□□□□ 0.9
RPUSD3-215ENST00000475470 NPC1L1Q9UHC9 1359 aa20.66■□□□□ 0.9
RPUSD3-215ENST00000475470 ARHGEF28Q8N1W1 1705 aaKnown RBP20.65■□□□□ 0.9
RPUSD3-215ENST00000475470 ZMYM3Q14202 1370 aa20.64■□□□□ 0.9
RPUSD3-215ENST00000475470 PPP2R1AP30153 589 aa20.64■□□□□ 0.89
RPUSD3-215ENST00000475470 SENP3-EIF4A1A0A087X0R7 540 aa20.63■□□□□ 0.89
RPUSD3-215ENST00000475470 STK26Q9P289 416 aa20.63■□□□□ 0.89
RPUSD3-215ENST00000475470 EVC2Q86UK5 1308 aa20.62■□□□□ 0.89
RPUSD3-215ENST00000475470 A2ML1A8K2U0 1454 aa20.62■□□□□ 0.89
RPUSD3-215ENST00000475470 CARD14Q9BXL6 1004 aa20.62■□□□□ 0.89
RPUSD3-215ENST00000475470 SMG6Q86US8 1419 aaKnown RBP20.61■□□□□ 0.89
RPUSD3-215ENST00000475470 PUS7Q96PZ0 661 aaKnown RBP20.59■□□□□ 0.89
RPUSD3-215ENST00000475470 NUDCQ9Y266 331 aa20.59■□□□□ 0.89
RPUSD3-215ENST00000475470 SAFB2Q14151 953 aaKnown RBP eCLIP20.58■□□□□ 0.89
RPUSD3-215ENST00000475470 SLC12A5Q9H2X9 1139 aa20.58■□□□□ 0.89
RPUSD3-215ENST00000475470 ALKQ9UM73 1620 aa20.58■□□□□ 0.89
RPUSD3-215ENST00000475470 RIMS2Q9UQ26 1411 aa20.58■□□□□ 0.88
RPUSD3-215ENST00000475470 INSRP06213 1382 aa20.57■□□□□ 0.88
RPUSD3-215ENST00000475470 YTHDC2Q9H6S0 1430 aaKnown RBP20.57■□□□□ 0.88
RPUSD3-215ENST00000475470 TULP4Q9NRJ4 1543 aa20.56■□□□□ 0.88
RPUSD3-215ENST00000475470 IRX6P78412 446 aaPredicted RBP20.55■□□□□ 0.88
RPUSD3-215ENST00000475470 POGKQ9P215 609 aa20.55■□□□□ 0.88
RPUSD3-215ENST00000475470 PTPRMP28827 1452 aa20.54■□□□□ 0.88
RPUSD3-215ENST00000475470 NSD3Q9BZ95 1437 aa20.54■□□□□ 0.88
RPUSD3-215ENST00000475470 WDR43Q15061 677 aaKnown RBP eCLIP20.54■□□□□ 0.88
RPUSD3-215ENST00000475470 PRAM1Q96QH2 718 aa20.54■□□□□ 0.88
RPUSD3-215ENST00000475470 BLMP54132 1417 aaPredicted RBP20.53■□□□□ 0.88
RPUSD3-215ENST00000475470 CABP2Q9NPB3 220 aa20.53■□□□□ 0.88
RPUSD3-215ENST00000475470 SALL2Q9Y467 1007 aaPredicted RBP20.53■□□□□ 0.88
RPUSD3-215ENST00000475470 TNRQ92752 1358 aa20.53■□□□□ 0.88
RPUSD3-215ENST00000475470 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.53■□□□□ 0.88
RPUSD3-215ENST00000475470 TRHP20396 242 aaPredicted RBP20.52■□□□□ 0.87
RPUSD3-215ENST00000475470 ADAMTS8Q9UP79 889 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms