RNA–Protein interactions for RNA: ENST00000474993.5

NPM3-204, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 2

Gene NPM3, Length 755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-204ENST00000474993 TMEM2Q9UHN6 1383 aa29.48■■■□□ 2.31
NPM3-204ENST00000474993 AEBP2Q6ZN18 517 aaPredicted RBP29.47■■■□□ 2.31
NPM3-204ENST00000474993 EID1Q9Y6B2 187 aa29.47■■■□□ 2.31
NPM3-204ENST00000474993 RIMS2Q9UQ26 1411 aa29.45■■■□□ 2.31
NPM3-204ENST00000474993 KDM2AQ9Y2K7 1162 aa29.45■■■□□ 2.31
NPM3-204ENST00000474993 PPP1R15AO75807 674 aaPredicted RBP29.43■■■□□ 2.3
NPM3-204ENST00000474993 ZFYVE9O95405 1425 aa29.42■■■□□ 2.3
NPM3-204ENST00000474993 SLIT1O75093 1534 aa29.41■■■□□ 2.3
NPM3-204ENST00000474993 ANKLE2Q86XL3 938 aa29.4■■■□□ 2.3
NPM3-204ENST00000474993 MYOM2P54296 1465 aa29.4■■■□□ 2.3
NPM3-204ENST00000474993 ARHGAP23Q9P227 1491 aa29.4■■■□□ 2.3
NPM3-204ENST00000474993 NEXMIFQ5QGS0 1516 aa29.4■■■□□ 2.3
NPM3-204ENST00000474993 MYO5BQ9ULV0 1848 aa29.39■■■□□ 2.3
NPM3-204ENST00000474993 TXNDC2Q86VQ3 553 aa29.39■■■□□ 2.3
NPM3-204ENST00000474993 PPLO60437 1756 aa29.35■■■□□ 2.29
NPM3-204ENST00000474993 NUTM2DQ5VT03 806 aaPredicted RBP29.34■■■□□ 2.29
NPM3-204ENST00000474993 LMTK3Q96Q04 1460 aa29.34■■■□□ 2.29
NPM3-204ENST00000474993 IFT172Q9UG01 1749 aa29.33■■■□□ 2.29
NPM3-204ENST00000474993 ADGRF5Q8IZF2 1346 aa29.32■■■□□ 2.28
NPM3-204ENST00000474993 SCAF11Q99590 1463 aaKnown RBP29.31■■■□□ 2.28
NPM3-204ENST00000474993 LTKP29376 864 aa29.31■■■□□ 2.28
NPM3-204ENST00000474993 NRXN1Q9ULB1 1477 aa29.3■■■□□ 2.28
NPM3-204ENST00000474993 PRAG1Q86YV5 1406 aa29.3■■■□□ 2.28
NPM3-204ENST00000474993 BCANQ96GW7 911 aa29.29■■■□□ 2.28
NPM3-204ENST00000474993 PLEKHG1Q9ULL1 1385 aa29.28■■■□□ 2.28
NPM3-204ENST00000474993 PIK3C2GO75747 1445 aa29.26■■■□□ 2.27
NPM3-204ENST00000474993 HSPA2P54652 639 aa29.25■■■□□ 2.27
NPM3-204ENST00000474993 NBPF8Q3BBV2 869 aa29.24■■■□□ 2.27
NPM3-204ENST00000474993 C14orf93Q9H972 538 aaKnown RBP29.23■■■□□ 2.27
NPM3-204ENST00000474993 NCKAP5LQ9HCH0 1330 aa29.2■■■□□ 2.26
NPM3-204ENST00000474993 MED14O60244 1454 aa29.19■■■□□ 2.26
NPM3-204ENST00000474993 CFAP70Q5T0N1 1121 aa29.18■■■□□ 2.26
NPM3-204ENST00000474993 NPHP4O75161 1426 aaPredicted RBP29.18■■■□□ 2.26
NPM3-204ENST00000474993 SETBP1Q9Y6X0 1596 aa29.18■■■□□ 2.26
NPM3-204ENST00000474993 TBX22Q9Y458 520 aa29.16■■■□□ 2.26
NPM3-204ENST00000474993 RALGAPBQ86X10 1494 aa29.16■■■□□ 2.26
NPM3-204ENST00000474993 ROCK2O75116 1388 aaKnown RBP29.15■■■□□ 2.26
NPM3-204ENST00000474993 LAMC1P11047 1609 aa29.15■■■□□ 2.26
NPM3-204ENST00000474993 KIAA1210Q9ULL0 1709 aa29.14■■■□□ 2.26
NPM3-204ENST00000474993 DMRT2Q9Y5R5 561 aa29.14■■■□□ 2.26
NPM3-204ENST00000474993 POLR1AO95602 1720 aaPredicted RBP29.14■■■□□ 2.25
NPM3-204ENST00000474993 SENP3Q9H4L4 574 aaPredicted RBP29.12■■■□□ 2.25
NPM3-204ENST00000474993 ALKQ9UM73 1620 aa29.12■■■□□ 2.25
NPM3-204ENST00000474993 DIP2AQ14689 1571 aa29.11■■■□□ 2.25
NPM3-204ENST00000474993 ADAMTS13Q76LX8 1427 aa29.11■■■□□ 2.25
NPM3-204ENST00000474993 TRPM1Q7Z4N2 1603 aa29.1■■■□□ 2.25
NPM3-204ENST00000474993 SLC26A8Q96RN1 970 aa29.1■■■□□ 2.25
NPM3-204ENST00000474993 CARD11Q9BXL7 1154 aa29.1■■■□□ 2.25
NPM3-204ENST00000474993 NBPF1Q3BBV0 1214 aa29.09■■■□□ 2.25
NPM3-204ENST00000474993 GPRASP1Q5JY77 1395 aa29.09■■■□□ 2.25
NPM3-204ENST00000474993 IQGAP1P46940 1657 aa29.07■■■□□ 2.24
NPM3-204ENST00000474993 PIK3R4Q99570 1358 aa29.07■■■□□ 2.24
NPM3-204ENST00000474993 NRXN3Q9Y4C0 1643 aa29.06■■■□□ 2.24
NPM3-204ENST00000474993 TMEM132EQ6IEE7 984 aa29.04■■■□□ 2.24
NPM3-204ENST00000474993 ADGRB1O14514 1584 aa29.01■■■□□ 2.23
NPM3-204ENST00000474993 METP08581 1390 aa29.01■■■□□ 2.23
NPM3-204ENST00000474993 STRCQ7RTU9 1775 aa29■■■□□ 2.23
NPM3-204ENST00000474993 LRPPRCP42704 1394 aaKnown RBP29■■■□□ 2.23
NPM3-204ENST00000474993 EIF3AQ14152 1382 aaKnown RBP28.99■■■□□ 2.23
NPM3-204ENST00000474993 YTHDC2Q9H6S0 1430 aaKnown RBP28.98■■■□□ 2.23
NPM3-204ENST00000474993 EIF4G2P78344 907 aaKnown RBP eCLIP28.98■■■□□ 2.23
NPM3-204ENST00000474993 STK26Q9P289 416 aa28.96■■■□□ 2.23
NPM3-204ENST00000474993 SETD1AO15047 1707 aaKnown RBP28.96■■■□□ 2.23
NPM3-204ENST00000474993 ABCC11Q96J66 1382 aa28.96■■■□□ 2.23
NPM3-204ENST00000474993 SIRT1Q96EB6 747 aa28.94■■■□□ 2.22
NPM3-204ENST00000474993 TRAK1Q9UPV9 953 aa28.94■■■□□ 2.22
NPM3-204ENST00000474993 AMOTL2Q9Y2J4 779 aa28.94■■■□□ 2.22
NPM3-204ENST00000474993 ASXL1Q8IXJ9 1541 aa28.94■■■□□ 2.22
NPM3-204ENST00000474993 USP47Q96K76 1375 aa28.93■■■□□ 2.22
NPM3-204ENST00000474993 KCNA6P17658 529 aa28.93■■■□□ 2.22
NPM3-204ENST00000474993 TECPR2O15040 1411 aa28.89■■■□□ 2.22
NPM3-204ENST00000474993 SLC24A1O60721 1099 aa28.89■■■□□ 2.22
NPM3-204ENST00000474993 DLC1Q96QB1 1528 aa28.88■■■□□ 2.21
NPM3-204ENST00000474993 PTPRUQ92729 1446 aa28.87■■■□□ 2.21
NPM3-204ENST00000474993 POGKQ9P215 609 aa28.87■■■□□ 2.21
NPM3-204ENST00000474993 HSPA5P11021 654 aaKnown RBP28.86■■■□□ 2.21
NPM3-204ENST00000474993 FAM135BQ49AJ0 1406 aa28.86■■■□□ 2.21
NPM3-204ENST00000474993 CENPJQ9HC77 1338 aaPredicted RBP28.85■■■□□ 2.21
NPM3-204ENST00000474993 PTCH1Q13635 1447 aa28.84■■■□□ 2.21
NPM3-204ENST00000474993 ST20-MTHFSA0A0A6YYL1 179 aa28.83■■■□□ 2.21
NPM3-204ENST00000474993 KNDC1Q76NI1 1749 aa28.83■■■□□ 2.21
NPM3-204ENST00000474993 CHD2O14647 1828 aaKnown RBP28.83■■■□□ 2.21
NPM3-204ENST00000474993 PRAM1Q96QH2 718 aa28.82■■■□□ 2.2
NPM3-204ENST00000474993 CPS1P31327 1500 aa28.81■■■□□ 2.2
NPM3-204ENST00000474993 NWD1Q149M9 1564 aa28.8■■■□□ 2.2
NPM3-204ENST00000474993 XRN1Q8IZH2 1706 aaKnown RBP28.8■■■□□ 2.2
NPM3-204ENST00000474993 NKTRP30414 1462 aaKnown RBP28.79■■■□□ 2.2
NPM3-204ENST00000474993 ROBO2Q9HCK4 1378 aa28.78■■■□□ 2.2
NPM3-204ENST00000474993 PROSER2Q86WR7 435 aaPredicted RBP28.77■■■□□ 2.2
NPM3-204ENST00000474993 WAPLQ7Z5K2 1190 aa28.76■■■□□ 2.19
NPM3-204ENST00000474993 SBNO2Q9Y2G9 1366 aa28.75■■■□□ 2.19
NPM3-204ENST00000474993 ARHGEF28Q8N1W1 1705 aaKnown RBP28.75■■■□□ 2.19
NPM3-204ENST00000474993 ZNF335Q9H4Z2 1342 aaPredicted RBP28.73■■■□□ 2.19
NPM3-204ENST00000474993 TMF1P82094 1093 aa28.72■■■□□ 2.19
NPM3-204ENST00000474993 SAFB2Q14151 953 aaKnown RBP eCLIP28.72■■■□□ 2.19
NPM3-204ENST00000474993 NCOA3Q9Y6Q9 1424 aa28.7■■■□□ 2.19
NPM3-204ENST00000474993 CDCA8Q53HL2 280 aa28.7■■■□□ 2.18
NPM3-204ENST00000474993 TESK2Q96S53 571 aa28.7■■■□□ 2.18
NPM3-204ENST00000474993 HIRIP3Q9BW71 556 aaPredicted RBP28.7■■■□□ 2.18
NPM3-204ENST00000474993 PLEKHH1Q9ULM0 1364 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms