RNA–Protein interactions for RNA: ENST00000474843.1

SRRM1-210, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-210ENST00000474843 SWT1Q5T5J6 900 aaKnown RBP10.76□□□□□ -0.69
SRRM1-210ENST00000474843 LAPTM4BQ86VI4 370 aa10.76□□□□□ -0.69
SRRM1-210ENST00000474843 ZFRQ96KR1 1074 aaKnown RBP10.76□□□□□ -0.69
SRRM1-210ENST00000474843 TMEM134Q9H6X4 195 aa10.76□□□□□ -0.69
SRRM1-210ENST00000474843 GOLGA8CPA6NN73 597 aa10.75□□□□□ -0.69
SRRM1-210ENST00000474843 RNF40O75150 1001 aa10.75□□□□□ -0.69
SRRM1-210ENST00000474843 SAMD7Q7Z3H4 446 aa10.75□□□□□ -0.69
SRRM1-210ENST00000474843 GPCPD1Q9NPB8 672 aa10.75□□□□□ -0.69
SRRM1-210ENST00000474843 HCSTQ9UBK5 93 aa10.75□□□□□ -0.69
SRRM1-210ENST00000474843 CLCN1P35523 988 aa10.74□□□□□ -0.69
SRRM1-210ENST00000474843 GIGYF2Q6Y7W6 1299 aaKnown RBP10.74□□□□□ -0.69
SRRM1-210ENST00000474843 KDM4CQ9H3R0 1056 aa10.73□□□□□ -0.69
SRRM1-210ENST00000474843 TMUB1Q9BVT8 246 aa10.71□□□□□ -0.69
SRRM1-210ENST00000474843 DAXXQ9UER7 740 aaPredicted RBP10.71□□□□□ -0.69
SRRM1-210ENST00000474843 DDX11L8A8MPP1 907 aa10.7□□□□□ -0.7
SRRM1-210ENST00000474843 BCAMP50895 628 aa10.7□□□□□ -0.7
SRRM1-210ENST00000474843 ANKK1Q8NFD2 765 aa10.7□□□□□ -0.7
SRRM1-210ENST00000474843 WNT2BQ93097 391 aa10.7□□□□□ -0.7
SRRM1-210ENST00000474843 MS4A1P11836 297 aa10.69□□□□□ -0.7
SRRM1-210ENST00000474843 HDGFP51858 240 aaKnown RBP10.69□□□□□ -0.7
SRRM1-210ENST00000474843 KCTD12Q96CX2 325 aaKnown RBP10.69□□□□□ -0.7
SRRM1-210ENST00000474843 LRCH3Q96II8 777 aa10.69□□□□□ -0.7
SRRM1-210ENST00000474843 FAM217BQ9NTX9 383 aaPredicted RBP10.68□□□□□ -0.7
SRRM1-210ENST00000474843 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.68□□□□□ -0.7
SRRM1-210ENST00000474843 SSTR3P32745 418 aaPredicted RBP10.67□□□□□ -0.7
SRRM1-210ENST00000474843 RDH13Q8NBN7 331 aa10.67□□□□□ -0.7
SRRM1-210ENST00000474843 SLF2Q8IX21 1173 aa10.65□□□□□ -0.7
SRRM1-210ENST00000474843 SOWAHBA6NEL2 793 aa10.64□□□□□ -0.71
SRRM1-210ENST00000474843 SLC10A3P09131 477 aa10.64□□□□□ -0.71
SRRM1-210ENST00000474843 FAM117AQ9C073 453 aa10.64□□□□□ -0.71
SRRM1-210ENST00000474843 PLA2G2EQ9NZK7 142 aa10.64□□□□□ -0.71
SRRM1-210ENST00000474843 HPS5Q9UPZ3 1129 aa10.64□□□□□ -0.71
SRRM1-210ENST00000474843 SLC4A3P48751 1232 aa10.63□□□□□ -0.71
SRRM1-210ENST00000474843 SULF1Q8IWU6 871 aa10.63□□□□□ -0.71
SRRM1-210ENST00000474843 CD46P15529 392 aa10.62□□□□□ -0.71
SRRM1-210ENST00000474843 THSD4Q6ZMP0 1018 aa10.62□□□□□ -0.71
SRRM1-210ENST00000474843 BEGAINQ9BUH8 593 aa10.62□□□□□ -0.71
SRRM1-210ENST00000474843 CFHP08603 1231 aa10.6□□□□□ -0.71
SRRM1-210ENST00000474843 IL27Q8NEV9 243 aa10.6□□□□□ -0.71
SRRM1-210ENST00000474843 PTPN5P54829 565 aa10.59□□□□□ -0.71
SRRM1-210ENST00000474843 PPP4CP60510 307 aa10.58□□□□□ -0.72
SRRM1-210ENST00000474843 WBP1LQ9NX94 342 aa10.58□□□□□ -0.72
SRRM1-210ENST00000474843 TSR3Q9UJK0 312 aaKnown RBP10.58□□□□□ -0.72
SRRM1-210ENST00000474843 PLEKHG3A1L390 1219 aa10.57□□□□□ -0.72
SRRM1-210ENST00000474843 RSPH4AQ5TD94 716 aa10.57□□□□□ -0.72
SRRM1-210ENST00000474843 DDRGK1Q96HY6 314 aa10.56□□□□□ -0.72
SRRM1-210ENST00000474843 GCGRP47871 477 aa10.54□□□□□ -0.72
SRRM1-210ENST00000474843 APLP1P51693 650 aa10.53□□□□□ -0.72
SRRM1-210ENST00000474843 KMT5BQ4FZB7 885 aa10.53□□□□□ -0.72
SRRM1-210ENST00000474843 NUTM1Q86Y26 1132 aa10.53□□□□□ -0.72
SRRM1-210ENST00000474843 KDM4AO75164 1064 aa10.52□□□□□ -0.73
SRRM1-210ENST00000474843 SPIRE2Q8WWL2 714 aa10.52□□□□□ -0.73
SRRM1-210ENST00000474843 NECTIN2Q92692 538 aa10.52□□□□□ -0.73
SRRM1-210ENST00000474843 TBC1D2Q9BYX2 928 aa10.52□□□□□ -0.73
SRRM1-210ENST00000474843 FUT2Q10981 343 aa10.51□□□□□ -0.73
SRRM1-210ENST00000474843 HLA-CQ95604 372 aa10.5□□□□□ -0.73
SRRM1-210ENST00000474843 GUCA2AQ02747 115 aa10.49□□□□□ -0.73
SRRM1-210ENST00000474843 PUS10Q3MIT2 529 aaKnown RBP10.49□□□□□ -0.73
SRRM1-210ENST00000474843 ACTN4O43707 911 aaKnown RBP10.48□□□□□ -0.73
SRRM1-210ENST00000474843 MYSM1Q5VVJ2 828 aa10.48□□□□□ -0.73
SRRM1-210ENST00000474843 MOXD2PA6NHM9 499 aa10.47□□□□□ -0.73
SRRM1-210ENST00000474843 HOXA2O43364 376 aa10.47□□□□□ -0.73
SRRM1-210ENST00000474843 NDUFV2P19404 249 aa10.47□□□□□ -0.73
SRRM1-210ENST00000474843 PRR14Q9BWN1 585 aa10.47□□□□□ -0.73
SRRM1-210ENST00000474843 POLR3EQ9NVU0 708 aa10.46□□□□□ -0.73
SRRM1-210ENST00000474843 PCDHB3Q9Y5E6 796 aa10.46□□□□□ -0.73
SRRM1-210ENST00000474843 ATP1B4Q9UN42 357 aaPredicted RBP10.45□□□□□ -0.74
SRRM1-210ENST00000474843 ATP6V1AP38606 617 aa10.44□□□□□ -0.74
SRRM1-210ENST00000474843 COPS2P61201 443 aa10.44□□□□□ -0.74
SRRM1-210ENST00000474843 USP46P62068 366 aa10.44□□□□□ -0.74
SRRM1-210ENST00000474843 CSPP1Q1MSJ5 1256 aa10.44□□□□□ -0.74
SRRM1-210ENST00000474843 TMEM132AQ24JP5 1023 aa10.44□□□□□ -0.74
SRRM1-210ENST00000474843 SH3D19Q5HYK7 790 aa10.44□□□□□ -0.74
SRRM1-210ENST00000474843 BLOC1S3Q6QNY0 202 aa10.44□□□□□ -0.74
SRRM1-210ENST00000474843 LIMD1Q9UGP4 676 aa10.44□□□□□ -0.74
SRRM1-210ENST00000474843 CCDC180Q9P1Z9 1646 aa10.44□□□□□ -0.74
SRRM1-210ENST00000474843 CLK2P49760 499 aaKnown RBP10.43□□□□□ -0.74
SRRM1-210ENST00000474843 DIXDC1Q155Q3 683 aa10.43□□□□□ -0.74
SRRM1-210ENST00000474843 RSPH6AQ9H0K4 717 aa10.43□□□□□ -0.74
SRRM1-210ENST00000474843 RSBN1LQ6PCB5 846 aaPredicted RBP10.42□□□□□ -0.74
SRRM1-210ENST00000474843 NYAP1Q6ZVC0 841 aa10.42□□□□□ -0.74
SRRM1-210ENST00000474843 RIC3Q7Z5B4 369 aa10.42□□□□□ -0.74
SRRM1-210ENST00000474843 FDX1P10109 184 aa10.41□□□□□ -0.74
SRRM1-210ENST00000474843 GRIPAP1Q4V328 841 aa10.41□□□□□ -0.74
SRRM1-210ENST00000474843 MORN1Q5T089 497 aa10.41□□□□□ -0.74
SRRM1-210ENST00000474843 PROCA1Q8NCQ7 364 aaPredicted RBP10.4□□□□□ -0.74
SRRM1-210ENST00000474843 MTRQ99707 1265 aa10.4□□□□□ -0.74
SRRM1-210ENST00000474843 SLC27A5Q9Y2P5 690 aa10.4□□□□□ -0.74
SRRM1-210ENST00000474843 SPTLC1O15269 473 aa10.39□□□□□ -0.75
SRRM1-210ENST00000474843 SKIV2LQ15477 1246 aaKnown RBP10.39□□□□□ -0.75
SRRM1-210ENST00000474843 IFFO2Q5TF58 517 aa10.39□□□□□ -0.75
SRRM1-210ENST00000474843 PCDHGC3Q9UN70 934 aa10.39□□□□□ -0.75
SRRM1-210ENST00000474843 PCDHB15Q9Y5E8 787 aa10.39□□□□□ -0.75
SRRM1-210ENST00000474843 PCMTD1Q96MG8 357 aaPredicted RBP10.38□□□□□ -0.75
SRRM1-210ENST00000474843 TLL1O43897 1013 aa10.37□□□□□ -0.75
SRRM1-210ENST00000474843 CABLES1Q8TDN4 633 aa10.37□□□□□ -0.75
SRRM1-210ENST00000474843 SYMPKQ92797 1274 aaKnown RBP10.37□□□□□ -0.75
SRRM1-210ENST00000474843 RGS20O76081 388 aa10.36□□□□□ -0.75
SRRM1-210ENST00000474843 RNF19BQ6ZMZ0 732 aa10.36□□□□□ -0.75
SRRM1-210ENST00000474843 NR1I2O75469 434 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms