RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 ARHGAP23Q9P227 1491 aa6.07□□□□□ -1.44
GAPVD1-216ENST00000474637 EID1Q9Y6B2 187 aa6.06□□□□□ -1.44
GAPVD1-216ENST00000474637 TMEM131LA2VDJ0 1609 aa6.06□□□□□ -1.44
GAPVD1-216ENST00000474637 TMEM2Q9UHN6 1383 aa6.06□□□□□ -1.44
GAPVD1-216ENST00000474637 MED14O60244 1454 aa6.06□□□□□ -1.44
GAPVD1-216ENST00000474637 KIF1BO60333 1816 aa6.06□□□□□ -1.44
GAPVD1-216ENST00000474637 ZNF316A6NFI3 1004 aaPredicted RBP6.05□□□□□ -1.44
GAPVD1-216ENST00000474637 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.05□□□□□ -1.44
GAPVD1-216ENST00000474637 NCKAP5LQ9HCH0 1330 aa6.05□□□□□ -1.44
GAPVD1-216ENST00000474637 CLTCL1P53675 1640 aa6.05□□□□□ -1.44
GAPVD1-216ENST00000474637 SCAF11Q99590 1463 aaKnown RBP6.05□□□□□ -1.44
GAPVD1-216ENST00000474637 NEURL4Q96JN8 1562 aa6.05□□□□□ -1.44
GAPVD1-216ENST00000474637 NPHP4O75161 1426 aaPredicted RBP6.05□□□□□ -1.44
GAPVD1-216ENST00000474637 MAPK8IP2Q13387 824 aaPredicted RBP6.04□□□□□ -1.44
GAPVD1-216ENST00000474637 MYO5BQ9ULV0 1848 aa6.04□□□□□ -1.44
GAPVD1-216ENST00000474637 IQGAP1P46940 1657 aa6.04□□□□□ -1.44
GAPVD1-216ENST00000474637 CCDC144AA2RUR9 1427 aa6.04□□□□□ -1.44
GAPVD1-216ENST00000474637 RIMS2Q9UQ26 1411 aa6.04□□□□□ -1.44
GAPVD1-216ENST00000474637 CHGAP10645 457 aaKnown RBP6.04□□□□□ -1.44
GAPVD1-216ENST00000474637 TXNDC2Q86VQ3 553 aa6.04□□□□□ -1.44
GAPVD1-216ENST00000474637 RPGRIP1LQ68CZ1 1315 aa6.03□□□□□ -1.44
GAPVD1-216ENST00000474637 ZFYVE9O95405 1425 aa6.03□□□□□ -1.44
GAPVD1-216ENST00000474637 PPP1R15AO75807 674 aaPredicted RBP6.02□□□□□ -1.45
GAPVD1-216ENST00000474637 ZNF326Q5BKZ1 582 aaKnown RBP6.02□□□□□ -1.45
GAPVD1-216ENST00000474637 PLEKHG1Q9ULL1 1385 aa6.02□□□□□ -1.45
GAPVD1-216ENST00000474637 NCBP3Q53F19 620 aaKnown RBP6.02□□□□□ -1.45
GAPVD1-216ENST00000474637 DIP2AQ14689 1571 aa6.02□□□□□ -1.45
GAPVD1-216ENST00000474637 ANKRD30BQ9BXX2 1392 aa6.02□□□□□ -1.45
GAPVD1-216ENST00000474637 NPM3O75607 178 aaKnown RBP6.01□□□□□ -1.45
GAPVD1-216ENST00000474637 LTKP29376 864 aa6.01□□□□□ -1.45
GAPVD1-216ENST00000474637 NEXMIFQ5QGS0 1516 aa6.01□□□□□ -1.45
GAPVD1-216ENST00000474637 CPS1P31327 1500 aa6□□□□□ -1.45
GAPVD1-216ENST00000474637 PPLO60437 1756 aa6□□□□□ -1.45
GAPVD1-216ENST00000474637 SPATA31E1Q6ZUB1 1445 aa6□□□□□ -1.45
GAPVD1-216ENST00000474637 VGFO15240 615 aaPredicted RBP6□□□□□ -1.45
GAPVD1-216ENST00000474637 BCANQ96GW7 911 aa6□□□□□ -1.45
GAPVD1-216ENST00000474637 IQSEC2Q5JU85 1478 aa6□□□□□ -1.45
GAPVD1-216ENST00000474637 SETBP1Q9Y6X0 1596 aa6□□□□□ -1.45
GAPVD1-216ENST00000474637 IFT172Q9UG01 1749 aa5.99□□□□□ -1.45
GAPVD1-216ENST00000474637 STAC3Q96MF2 364 aa5.99□□□□□ -1.45
GAPVD1-216ENST00000474637 TBX22Q9Y458 520 aa5.99□□□□□ -1.45
GAPVD1-216ENST00000474637 LTBP4Q8N2S1 1624 aa5.99□□□□□ -1.45
GAPVD1-216ENST00000474637 PIK3R4Q99570 1358 aa5.98□□□□□ -1.45
GAPVD1-216ENST00000474637 CNKSR2Q8WXI2 1034 aa5.98□□□□□ -1.45
GAPVD1-216ENST00000474637 CENPBP07199 599 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-216ENST00000474637 ZNF335Q9H4Z2 1342 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-216ENST00000474637 NWD1Q149M9 1564 aa5.98□□□□□ -1.45
GAPVD1-216ENST00000474637 MYOM2P54296 1465 aa5.98□□□□□ -1.45
GAPVD1-216ENST00000474637 DHX57Q6P158 1386 aaKnown RBP5.97□□□□□ -1.45
GAPVD1-216ENST00000474637 KCNA6P17658 529 aa5.97□□□□□ -1.45
GAPVD1-216ENST00000474637 MIER1Q8N108 512 aa5.97□□□□□ -1.45
GAPVD1-216ENST00000474637 CERKQ8TCT0 537 aa5.97□□□□□ -1.45
GAPVD1-216ENST00000474637 ADAMTS13Q76LX8 1427 aa5.97□□□□□ -1.45
GAPVD1-216ENST00000474637 NRXN3Q9Y4C0 1643 aa5.97□□□□□ -1.45
GAPVD1-216ENST00000474637 NUTM2DQ5VT03 806 aaPredicted RBP5.97□□□□□ -1.45
GAPVD1-216ENST00000474637 NKTRP30414 1462 aaKnown RBP5.97□□□□□ -1.45
GAPVD1-216ENST00000474637 CHD2O14647 1828 aaKnown RBP5.97□□□□□ -1.45
GAPVD1-216ENST00000474637 RGL3Q3MIN7 710 aa5.96□□□□□ -1.45
GAPVD1-216ENST00000474637 SLC26A8Q96RN1 970 aa5.96□□□□□ -1.45
GAPVD1-216ENST00000474637 YTHDC1Q96MU7 727 aaKnown RBP5.96□□□□□ -1.46
GAPVD1-216ENST00000474637 NRXN1Q9ULB1 1477 aa5.96□□□□□ -1.46
GAPVD1-216ENST00000474637 LAMC1P11047 1609 aa5.95□□□□□ -1.46
GAPVD1-216ENST00000474637 ALKQ9UM73 1620 aa5.95□□□□□ -1.46
GAPVD1-216ENST00000474637 STRCP1A6NGW2 1772 aa5.95□□□□□ -1.46
GAPVD1-216ENST00000474637 NCOA3Q9Y6Q9 1424 aa5.95□□□□□ -1.46
GAPVD1-216ENST00000474637 PIK3C2GO75747 1445 aa5.95□□□□□ -1.46
GAPVD1-216ENST00000474637 SETD1AO15047 1707 aaKnown RBP5.95□□□□□ -1.46
GAPVD1-216ENST00000474637 LRRC7Q96NW7 1537 aa5.94□□□□□ -1.46
GAPVD1-216ENST00000474637 ADGRF5Q8IZF2 1346 aa5.94□□□□□ -1.46
GAPVD1-216ENST00000474637 XRN1Q8IZH2 1706 aaKnown RBP5.94□□□□□ -1.46
GAPVD1-216ENST00000474637 CLSPNQ9HAW4 1339 aa5.94□□□□□ -1.46
GAPVD1-216ENST00000474637 PRAG1Q86YV5 1406 aa5.94□□□□□ -1.46
GAPVD1-216ENST00000474637 PROSER2Q86WR7 435 aaPredicted RBP5.93□□□□□ -1.46
GAPVD1-216ENST00000474637 DCAF11Q8TEB1 546 aa5.93□□□□□ -1.46
GAPVD1-216ENST00000474637 FBXO41Q8TF61 875 aa5.93□□□□□ -1.46
GAPVD1-216ENST00000474637 C14orf93Q9H972 538 aaKnown RBP5.93□□□□□ -1.46
GAPVD1-216ENST00000474637 AMOTL2Q9Y2J4 779 aa5.93□□□□□ -1.46
GAPVD1-216ENST00000474637 METP08581 1390 aa5.93□□□□□ -1.46
GAPVD1-216ENST00000474637 PTCH1Q13635 1447 aa5.92□□□□□ -1.46
GAPVD1-216ENST00000474637 KNDC1Q76NI1 1749 aa5.92□□□□□ -1.46
GAPVD1-216ENST00000474637 PTPRUQ92729 1446 aa5.92□□□□□ -1.46
GAPVD1-216ENST00000474637 KIAA1210Q9ULL0 1709 aa5.92□□□□□ -1.46
GAPVD1-216ENST00000474637 KDM2AQ9Y2K7 1162 aa5.92□□□□□ -1.46
GAPVD1-216ENST00000474637 XIRP1Q702N8 1843 aaKnown RBP5.92□□□□□ -1.46
GAPVD1-216ENST00000474637 LRPPRCP42704 1394 aaKnown RBP5.91□□□□□ -1.46
GAPVD1-216ENST00000474637 TMEM94Q12767 1356 aa5.91□□□□□ -1.46
GAPVD1-216ENST00000474637 TOM1O60784 492 aa5.91□□□□□ -1.46
GAPVD1-216ENST00000474637 SIN3AQ96ST3 1273 aa5.91□□□□□ -1.46
GAPVD1-216ENST00000474637 TECPR2O15040 1411 aa5.91□□□□□ -1.46
GAPVD1-216ENST00000474637 MSH6P52701 1360 aa5.91□□□□□ -1.46
GAPVD1-216ENST00000474637 TONSLQ96HA7 1378 aa5.91□□□□□ -1.46
GAPVD1-216ENST00000474637 SIRT1Q96EB6 747 aa5.91□□□□□ -1.46
GAPVD1-216ENST00000474637 ABCC11Q96J66 1382 aa5.9□□□□□ -1.46
GAPVD1-216ENST00000474637 L3MBTL2Q969R5 705 aa5.9□□□□□ -1.46
GAPVD1-216ENST00000474637 DLC1Q96QB1 1528 aa5.9□□□□□ -1.46
GAPVD1-216ENST00000474637 DCCP43146 1447 aa5.9□□□□□ -1.46
GAPVD1-216ENST00000474637 YTHDC2Q9H6S0 1430 aaKnown RBP5.9□□□□□ -1.46
GAPVD1-216ENST00000474637 UBAP1LF5GYI3 381 aa5.9□□□□□ -1.47
GAPVD1-216ENST00000474637 CFAP70Q5T0N1 1121 aa5.9□□□□□ -1.47
GAPVD1-216ENST00000474637 TIMELESSQ9UNS1 1208 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms