RNA–Protein interactions for RNA: ENST00000474586.5

TRA2A-204, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 868 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-204ENST00000474586 CHGAP10645 457 aaKnown RBP32.28■■■□□ 2.76
TRA2A-204ENST00000474586 TMEM131LA2VDJ0 1609 aa32.28■■■□□ 2.76
TRA2A-204ENST00000474586 KCNA6P17658 529 aa32.27■■■□□ 2.76
TRA2A-204ENST00000474586 XIRP1Q702N8 1843 aaKnown RBP32.27■■■□□ 2.76
TRA2A-204ENST00000474586 ZFYVE9O95405 1425 aa32.26■■■□□ 2.76
TRA2A-204ENST00000474586 RIMS2Q9UQ26 1411 aa32.26■■■□□ 2.75
TRA2A-204ENST00000474586 RRBP1Q9P2E9 1410 aaKnown RBP32.25■■■□□ 2.75
TRA2A-204ENST00000474586 PPP1R15AO75807 674 aaPredicted RBP32.23■■■□□ 2.75
TRA2A-204ENST00000474586 HDGFP51858 240 aaKnown RBP32.23■■■□□ 2.75
TRA2A-204ENST00000474586 TMEM94Q12767 1356 aa32.2■■■□□ 2.75
TRA2A-204ENST00000474586 PLEKHG1Q9ULL1 1385 aa32.2■■■□□ 2.75
TRA2A-204ENST00000474586 PROSER2Q86WR7 435 aaPredicted RBP32.2■■■□□ 2.75
TRA2A-204ENST00000474586 RBM33Q96EV2 1170 aaKnown RBP32.18■■■□□ 2.74
TRA2A-204ENST00000474586 NUTM2DQ5VT03 806 aaPredicted RBP32.17■■■□□ 2.74
TRA2A-204ENST00000474586 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.16■■■□□ 2.74
TRA2A-204ENST00000474586 NWD1Q149M9 1564 aa32.13■■■□□ 2.73
TRA2A-204ENST00000474586 MED1Q15648 1581 aaPredicted RBP32.11■■■□□ 2.73
TRA2A-204ENST00000474586 NKTRP30414 1462 aaKnown RBP32.1■■■□□ 2.73
TRA2A-204ENST00000474586 NAIPQ13075 1403 aa32.1■■■□□ 2.73
TRA2A-204ENST00000474586 TBX22Q9Y458 520 aa32.1■■■□□ 2.73
TRA2A-204ENST00000474586 SOCS7O14512 581 aa32.07■■■□□ 2.72
TRA2A-204ENST00000474586 CHD2O14647 1828 aaKnown RBP32.07■■■□□ 2.72
TRA2A-204ENST00000474586 SPHKAPQ2M3C7 1700 aa32.06■■■□□ 2.72
TRA2A-204ENST00000474586 ADAMTS13Q76LX8 1427 aa32.05■■■□□ 2.72
TRA2A-204ENST00000474586 FAM135BQ49AJ0 1406 aa32.02■■■□□ 2.72
TRA2A-204ENST00000474586 MSH6P52701 1360 aa32■■■□□ 2.71
TRA2A-204ENST00000474586 ZNF326Q5BKZ1 582 aaKnown RBP31.98■■■□□ 2.71
TRA2A-204ENST00000474586 TRIM52Q96A61 297 aa31.98■■■□□ 2.71
TRA2A-204ENST00000474586 HFM1A2PYH4 1435 aa31.97■■■□□ 2.71
TRA2A-204ENST00000474586 DIP2AQ14689 1571 aa31.97■■■□□ 2.71
TRA2A-204ENST00000474586 ROBO1Q9Y6N7 1651 aa31.94■■■□□ 2.7
TRA2A-204ENST00000474586 PIK3R4Q99570 1358 aa31.94■■■□□ 2.7
TRA2A-204ENST00000474586 CLTCL1P53675 1640 aa31.93■■■□□ 2.7
TRA2A-204ENST00000474586 TRPM2O94759 1503 aa31.92■■■□□ 2.7
TRA2A-204ENST00000474586 PHF23Q9BUL5 403 aaPredicted RBP31.92■■■□□ 2.7
TRA2A-204ENST00000474586 SLAIN2Q9P270 581 aa31.92■■■□□ 2.7
TRA2A-204ENST00000474586 C14orf37Q86TY3 774 aa31.9■■■□□ 2.7
TRA2A-204ENST00000474586 AMOTL2Q9Y2J4 779 aa31.9■■■□□ 2.7
TRA2A-204ENST00000474586 PTPRUQ92729 1446 aa31.89■■■□□ 2.7
TRA2A-204ENST00000474586 NCOA3Q9Y6Q9 1424 aa31.89■■■□□ 2.7
TRA2A-204ENST00000474586 NRXN3Q9Y4C0 1643 aa31.87■■■□□ 2.69
TRA2A-204ENST00000474586 SLC4A1APQ9BWU0 796 aaKnown RBP31.86■■■□□ 2.69
TRA2A-204ENST00000474586 SETBP1Q9Y6X0 1596 aa31.85■■■□□ 2.69
TRA2A-204ENST00000474586 KIF1BO60333 1816 aa31.84■■■□□ 2.69
TRA2A-204ENST00000474586 NEXMIFQ5QGS0 1516 aa31.83■■■□□ 2.69
TRA2A-204ENST00000474586 C19orf44Q9H6X5 657 aa31.82■■■□□ 2.68
TRA2A-204ENST00000474586 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.8■■■□□ 2.68
TRA2A-204ENST00000474586 METP08581 1390 aa31.8■■■□□ 2.68
TRA2A-204ENST00000474586 ATF3P18847 181 aa31.78■■■□□ 2.68
TRA2A-204ENST00000474586 CADPS2Q86UW7 1296 aa31.77■■■□□ 2.68
TRA2A-204ENST00000474586 XRN1Q8IZH2 1706 aaKnown RBP31.76■■■□□ 2.67
TRA2A-204ENST00000474586 FOXD1Q16676 465 aa31.75■■■□□ 2.67
TRA2A-204ENST00000474586 PHLPP1O60346 1717 aa31.75■■■□□ 2.67
TRA2A-204ENST00000474586 RGS17Q9UGC6 210 aaPredicted RBP31.72■■■□□ 2.67
TRA2A-204ENST00000474586 VGFO15240 615 aaPredicted RBP31.7■■■□□ 2.67
TRA2A-204ENST00000474586 RPGRIP1LQ68CZ1 1315 aa31.68■■■□□ 2.66
TRA2A-204ENST00000474586 JCADQ9P266 1359 aa31.66■■■□□ 2.66
TRA2A-204ENST00000474586 MPHOSPH9Q99550 1183 aa31.65■■■□□ 2.66
TRA2A-204ENST00000474586 COL16A1Q07092 1604 aaPredicted RBP31.64■■■□□ 2.66
TRA2A-204ENST00000474586 DCCP43146 1447 aa31.63■■■□□ 2.65
TRA2A-204ENST00000474586 BRINP3Q76B58 766 aa31.62■■■□□ 2.65
TRA2A-204ENST00000474586 PPLO60437 1756 aa31.61■■■□□ 2.65
TRA2A-204ENST00000474586 AHDC1Q5TGY3 1603 aaPredicted RBP31.6■■■□□ 2.65
TRA2A-204ENST00000474586 SETD1AO15047 1707 aaKnown RBP31.59■■■□□ 2.65
TRA2A-204ENST00000474586 CCDC144AA2RUR9 1427 aa31.58■■■□□ 2.65
TRA2A-204ENST00000474586 MST1RQ04912 1400 aa31.58■■■□□ 2.65
TRA2A-204ENST00000474586 ADGRL3Q9HAR2 1447 aa31.58■■■□□ 2.65
TRA2A-204ENST00000474586 RGL3Q3MIN7 710 aa31.56■■■□□ 2.64
TRA2A-204ENST00000474586 POTEAQ6S8J7 498 aa31.54■■■□□ 2.64
TRA2A-204ENST00000474586 NALCNQ8IZF0 1738 aa31.54■■■□□ 2.64
TRA2A-204ENST00000474586 SETD5Q9C0A6 1442 aa31.53■■■□□ 2.64
TRA2A-204ENST00000474586 ROBO2Q9HCK4 1378 aa31.53■■■□□ 2.64
TRA2A-204ENST00000474586 ASXL1Q8IXJ9 1541 aa31.52■■■□□ 2.64
TRA2A-204ENST00000474586 ADGRF5Q8IZF2 1346 aa31.51■■■□□ 2.64
TRA2A-204ENST00000474586 PTCH1Q13635 1447 aa31.51■■■□□ 2.64
TRA2A-204ENST00000474586 SPATA31E1Q6ZUB1 1445 aa31.51■■■□□ 2.64
TRA2A-204ENST00000474586 SPATA31A6Q5VVP1 1343 aa31.49■■■□□ 2.63
TRA2A-204ENST00000474586 LRP6O75581 1613 aa31.47■■■□□ 2.63
TRA2A-204ENST00000474586 ACIN1Q9UKV3 1341 aaKnown RBP31.47■■■□□ 2.63
TRA2A-204ENST00000474586 SHPRHQ149N8 1683 aa31.46■■■□□ 2.63
TRA2A-204ENST00000474586 PRAG1Q86YV5 1406 aa31.45■■■□□ 2.63
TRA2A-204ENST00000474586 DDX17Q92841 729 aaKnown RBP31.44■■■□□ 2.62
TRA2A-204ENST00000474586 ANKRD30BQ9BXX2 1392 aa31.43■■■□□ 2.62
TRA2A-204ENST00000474586 NHSL1Q5SYE7 1610 aa31.43■■■□□ 2.62
TRA2A-204ENST00000474586 MEX3CQ5U5Q3 659 aaKnown RBP31.43■■■□□ 2.62
TRA2A-204ENST00000474586 C1orf167Q5SNV9 1468 aa31.42■■■□□ 2.62
TRA2A-204ENST00000474586 IFT172Q9UG01 1749 aa31.42■■■□□ 2.62
TRA2A-204ENST00000474586 RAB3GAP2Q9H2M9 1393 aa31.42■■■□□ 2.62
TRA2A-204ENST00000474586 NUTM2BA6NNL0 878 aaPredicted RBP31.39■■■□□ 2.62
TRA2A-204ENST00000474586 NUTM2EB1AL46 878 aaPredicted RBP31.39■■■□□ 2.62
TRA2A-204ENST00000474586 NUTM2AQ8IVF1 878 aaPredicted RBP31.39■■■□□ 2.62
TRA2A-204ENST00000474586 STK26Q9P289 416 aa31.39■■■□□ 2.62
TRA2A-204ENST00000474586 LRRC59Q96AG4 307 aaKnown RBP31.38■■■□□ 2.61
TRA2A-204ENST00000474586 TMEM132EQ6IEE7 984 aa31.36■■■□□ 2.61
TRA2A-204ENST00000474586 ORAI2Q96SN7 254 aa31.36■■■□□ 2.61
TRA2A-204ENST00000474586 PIK3C2GO75747 1445 aa31.33■■■□□ 2.61
TRA2A-204ENST00000474586 LRPPRCP42704 1394 aaKnown RBP31.32■■■□□ 2.6
TRA2A-204ENST00000474586 WAPLQ7Z5K2 1190 aa31.32■■■□□ 2.6
TRA2A-204ENST00000474586 ZNF772Q68DY9 489 aaPredicted RBP31.29■■■□□ 2.6
TRA2A-204ENST00000474586 TECPR2O15040 1411 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms