RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 ZNF326Q5BKZ1 582 aaKnown RBP12.01□□□□□ -0.49
CNN3-205ENST00000474409 RGL3Q3MIN7 710 aa12□□□□□ -0.49
CNN3-205ENST00000474409 SLIT1O75093 1534 aa12□□□□□ -0.49
CNN3-205ENST00000474409 NRXN3Q9Y4C0 1643 aa12□□□□□ -0.49
CNN3-205ENST00000474409 TIMELESSQ9UNS1 1208 aa11.99□□□□□ -0.49
CNN3-205ENST00000474409 RIMS2Q9UQ26 1411 aa11.98□□□□□ -0.49
CNN3-205ENST00000474409 L3MBTL2Q969R5 705 aa11.98□□□□□ -0.49
CNN3-205ENST00000474409 ARHGAP23Q9P227 1491 aa11.97□□□□□ -0.49
CNN3-205ENST00000474409 ZFYVE9O95405 1425 aa11.97□□□□□ -0.49
CNN3-205ENST00000474409 PRAG1Q86YV5 1406 aa11.96□□□□□ -0.49
CNN3-205ENST00000474409 DCAF11Q8TEB1 546 aa11.96□□□□□ -0.49
CNN3-205ENST00000474409 STRCQ7RTU9 1775 aa11.96□□□□□ -0.49
CNN3-205ENST00000474409 KNDC1Q76NI1 1749 aa11.96□□□□□ -0.49
CNN3-205ENST00000474409 SETBP1Q9Y6X0 1596 aa11.96□□□□□ -0.5
CNN3-205ENST00000474409 RALGAPBQ86X10 1494 aa11.95□□□□□ -0.5
CNN3-205ENST00000474409 LMTK3Q96Q04 1460 aa11.95□□□□□ -0.5
CNN3-205ENST00000474409 NRXN1Q9ULB1 1477 aa11.95□□□□□ -0.5
CNN3-205ENST00000474409 ARHGEF28Q8N1W1 1705 aaKnown RBP11.95□□□□□ -0.5
CNN3-205ENST00000474409 RPGRIP1LQ68CZ1 1315 aa11.95□□□□□ -0.5
CNN3-205ENST00000474409 KDM2AQ9Y2K7 1162 aa11.95□□□□□ -0.5
CNN3-205ENST00000474409 DIP2AQ14689 1571 aa11.95□□□□□ -0.5
CNN3-205ENST00000474409 PIK3C2GO75747 1445 aa11.94□□□□□ -0.5
CNN3-205ENST00000474409 TMEM2Q9UHN6 1383 aa11.94□□□□□ -0.5
CNN3-205ENST00000474409 SCAF11Q99590 1463 aaKnown RBP11.94□□□□□ -0.5
CNN3-205ENST00000474409 PPP1R15AO75807 674 aaPredicted RBP11.93□□□□□ -0.5
CNN3-205ENST00000474409 ALKQ9UM73 1620 aa11.93□□□□□ -0.5
CNN3-205ENST00000474409 CHD2O14647 1828 aaKnown RBP11.93□□□□□ -0.5
CNN3-205ENST00000474409 QRICH2Q9H0J4 1663 aa11.92□□□□□ -0.5
CNN3-205ENST00000474409 THEMISQ8N1K5 641 aaPredicted RBP11.92□□□□□ -0.5
CNN3-205ENST00000474409 NUTM2DQ5VT03 806 aaPredicted RBP11.91□□□□□ -0.5
CNN3-205ENST00000474409 STAC3Q96MF2 364 aa11.91□□□□□ -0.5
CNN3-205ENST00000474409 VGFO15240 615 aaPredicted RBP11.9□□□□□ -0.5
CNN3-205ENST00000474409 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.9□□□□□ -0.5
CNN3-205ENST00000474409 ASXL1Q8IXJ9 1541 aa11.9□□□□□ -0.5
CNN3-205ENST00000474409 ADGRF5Q8IZF2 1346 aa11.89□□□□□ -0.51
CNN3-205ENST00000474409 HDGFP51858 240 aaKnown RBP11.89□□□□□ -0.51
CNN3-205ENST00000474409 EID1Q9Y6B2 187 aa11.89□□□□□ -0.51
CNN3-205ENST00000474409 ROCK2O75116 1388 aaKnown RBP11.89□□□□□ -0.51
CNN3-205ENST00000474409 PLEKHG1Q9ULL1 1385 aa11.89□□□□□ -0.51
CNN3-205ENST00000474409 XRN1Q8IZH2 1706 aaKnown RBP11.88□□□□□ -0.51
CNN3-205ENST00000474409 ADGRB1O14514 1584 aa11.88□□□□□ -0.51
CNN3-205ENST00000474409 NBPF8Q3BBV2 869 aa11.87□□□□□ -0.51
CNN3-205ENST00000474409 TXNDC2Q86VQ3 553 aa11.86□□□□□ -0.51
CNN3-205ENST00000474409 BCANQ96GW7 911 aa11.86□□□□□ -0.51
CNN3-205ENST00000474409 SENP3Q9H4L4 574 aaPredicted RBP11.86□□□□□ -0.51
CNN3-205ENST00000474409 MED14O60244 1454 aa11.86□□□□□ -0.51
CNN3-205ENST00000474409 NPHP4O75161 1426 aaPredicted RBP11.86□□□□□ -0.51
CNN3-205ENST00000474409 STRCP1A6NGW2 1772 aa11.85□□□□□ -0.51
CNN3-205ENST00000474409 CPS1P31327 1500 aa11.85□□□□□ -0.51
CNN3-205ENST00000474409 LTKP29376 864 aa11.84□□□□□ -0.51
CNN3-205ENST00000474409 ANKLE2Q86XL3 938 aa11.84□□□□□ -0.51
CNN3-205ENST00000474409 ADAMTS13Q76LX8 1427 aa11.84□□□□□ -0.51
CNN3-205ENST00000474409 NWD1Q149M9 1564 aa11.84□□□□□ -0.51
CNN3-205ENST00000474409 GPRASP1Q5JY77 1395 aa11.83□□□□□ -0.52
CNN3-205ENST00000474409 HSPA2P54652 639 aa11.83□□□□□ -0.52
CNN3-205ENST00000474409 CFAP70Q5T0N1 1121 aa11.82□□□□□ -0.52
CNN3-205ENST00000474409 EIF3AQ14152 1382 aaKnown RBP11.81□□□□□ -0.52
CNN3-205ENST00000474409 NALCNQ8IZF0 1738 aa11.81□□□□□ -0.52
CNN3-205ENST00000474409 CARD11Q9BXL7 1154 aa11.81□□□□□ -0.52
CNN3-205ENST00000474409 XIRP1Q702N8 1843 aaKnown RBP11.81□□□□□ -0.52
CNN3-205ENST00000474409 DLC1Q96QB1 1528 aa11.81□□□□□ -0.52
CNN3-205ENST00000474409 USP47Q96K76 1375 aa11.8□□□□□ -0.52
CNN3-205ENST00000474409 YTHDC2Q9H6S0 1430 aaKnown RBP11.8□□□□□ -0.52
CNN3-205ENST00000474409 C14orf93Q9H972 538 aaKnown RBP11.8□□□□□ -0.52
CNN3-205ENST00000474409 NCKAP5LQ9HCH0 1330 aa11.8□□□□□ -0.52
CNN3-205ENST00000474409 NBPF1Q3BBV0 1214 aa11.79□□□□□ -0.52
CNN3-205ENST00000474409 AEBP2Q6ZN18 517 aaPredicted RBP11.79□□□□□ -0.52
CNN3-205ENST00000474409 ITSN1Q15811 1721 aa11.79□□□□□ -0.52
CNN3-205ENST00000474409 RGPD8O14715 1765 aaPredicted RBP11.78□□□□□ -0.52
CNN3-205ENST00000474409 METP08581 1390 aa11.78□□□□□ -0.52
CNN3-205ENST00000474409 SLC26A8Q96RN1 970 aa11.77□□□□□ -0.53
CNN3-205ENST00000474409 PIK3R4Q99570 1358 aa11.77□□□□□ -0.53
CNN3-205ENST00000474409 EIF4G2P78344 907 aaKnown RBP eCLIP11.76□□□□□ -0.53
CNN3-205ENST00000474409 TMEM132EQ6IEE7 984 aa11.76□□□□□ -0.53
CNN3-205ENST00000474409 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.76□□□□□ -0.53
CNN3-205ENST00000474409 LRPPRCP42704 1394 aaKnown RBP11.76□□□□□ -0.53
CNN3-205ENST00000474409 TECPR2O15040 1411 aa11.76□□□□□ -0.53
CNN3-205ENST00000474409 PTCH1Q13635 1447 aa11.76□□□□□ -0.53
CNN3-205ENST00000474409 ADGRB2O60241 1585 aa11.75□□□□□ -0.53
CNN3-205ENST00000474409 MYOM1P52179 1685 aa11.75□□□□□ -0.53
CNN3-205ENST00000474409 PTPRUQ92729 1446 aa11.75□□□□□ -0.53
CNN3-205ENST00000474409 NKTRP30414 1462 aaKnown RBP11.75□□□□□ -0.53
CNN3-205ENST00000474409 TBX22Q9Y458 520 aa11.74□□□□□ -0.53
CNN3-205ENST00000474409 FMN2Q9NZ56 1722 aa11.74□□□□□ -0.53
CNN3-205ENST00000474409 HSPA5P11021 654 aaKnown RBP11.73□□□□□ -0.53
CNN3-205ENST00000474409 STK26Q9P289 416 aa11.73□□□□□ -0.53
CNN3-205ENST00000474409 TRAK1Q9UPV9 953 aa11.73□□□□□ -0.53
CNN3-205ENST00000474409 TOPAZ1Q8N9V7 1692 aa11.72□□□□□ -0.53
CNN3-205ENST00000474409 FAM135BQ49AJ0 1406 aa11.71□□□□□ -0.53
CNN3-205ENST00000474409 ABCC11Q96J66 1382 aa11.71□□□□□ -0.53
CNN3-205ENST00000474409 CENPJQ9HC77 1338 aaPredicted RBP11.71□□□□□ -0.53
CNN3-205ENST00000474409 CDC42BPGQ6DT37 1551 aa11.71□□□□□ -0.54
CNN3-205ENST00000474409 TULP4Q9NRJ4 1543 aa11.7□□□□□ -0.54
CNN3-205ENST00000474409 AKAP12Q02952 1782 aa11.7□□□□□ -0.54
CNN3-205ENST00000474409 HIRIP3Q9BW71 556 aaPredicted RBP11.7□□□□□ -0.54
CNN3-205ENST00000474409 ROBO2Q9HCK4 1378 aa11.69□□□□□ -0.54
CNN3-205ENST00000474409 ST20-MTHFSA0A0A6YYL1 179 aa11.69□□□□□ -0.54
CNN3-205ENST00000474409 POGKQ9P215 609 aa11.69□□□□□ -0.54
CNN3-205ENST00000474409 AMOTL2Q9Y2J4 779 aa11.69□□□□□ -0.54
CNN3-205ENST00000474409 DMRT2Q9Y5R5 561 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms