RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 ARHGAP23Q9P227 1491 aa16.07■□□□□ 0.16
RNF220-210ENST00000474394 SLIT1O75093 1534 aa16.07■□□□□ 0.16
RNF220-210ENST00000474394 SETD1AO15047 1707 aaKnown RBP16.07■□□□□ 0.16
RNF220-210ENST00000474394 ADGRB3O60242 1522 aa16.06■□□□□ 0.16
RNF220-210ENST00000474394 SETD5Q9C0A6 1442 aa16.06■□□□□ 0.16
RNF220-210ENST00000474394 TMEM2Q9UHN6 1383 aa16.06■□□□□ 0.16
RNF220-210ENST00000474394 TXNDC2Q86VQ3 553 aa16.06■□□□□ 0.16
RNF220-210ENST00000474394 SLC4A1APQ9BWU0 796 aaKnown RBP16.06■□□□□ 0.16
RNF220-210ENST00000474394 SCAF11Q99590 1463 aaKnown RBP16.05■□□□□ 0.16
RNF220-210ENST00000474394 SRCAPQ6ZRS2 3230 aa16.04■□□□□ 0.16
RNF220-210ENST00000474394 CHGAP10645 457 aaKnown RBP16.04■□□□□ 0.16
RNF220-210ENST00000474394 LTKP29376 864 aa16.04■□□□□ 0.16
RNF220-210ENST00000474394 FAM135BQ49AJ0 1406 aa16.02■□□□□ 0.16
RNF220-210ENST00000474394 SPHKAPQ2M3C7 1700 aa16.02■□□□□ 0.16
RNF220-210ENST00000474394 XIRP1Q702N8 1843 aaKnown RBP16.01■□□□□ 0.15
RNF220-210ENST00000474394 HDGFP51858 240 aaKnown RBP16.01■□□□□ 0.15
RNF220-210ENST00000474394 UPF1Q92900 1129 aaKnown RBP eCLIP16.01■□□□□ 0.158e-15■■□□□ 13.1
RNF220-210ENST00000474394 TMEM131LA2VDJ0 1609 aa16.01■□□□□ 0.15
RNF220-210ENST00000474394 RAB3GAP2Q9H2M9 1393 aa15.99■□□□□ 0.15
RNF220-210ENST00000474394 MPHOSPH9Q99550 1183 aa15.98■□□□□ 0.15
RNF220-210ENST00000474394 RIMS2Q9UQ26 1411 aa15.98■□□□□ 0.15
RNF220-210ENST00000474394 MYO5BQ9ULV0 1848 aa15.98■□□□□ 0.15
RNF220-210ENST00000474394 TRPM2O94759 1503 aa15.98■□□□□ 0.15
RNF220-210ENST00000474394 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.97■□□□□ 0.15
RNF220-210ENST00000474394 ZFYVE9O95405 1425 aa15.96■□□□□ 0.15
RNF220-210ENST00000474394 PPP1R15AO75807 674 aaPredicted RBP15.96■□□□□ 0.15
RNF220-210ENST00000474394 BCANQ96GW7 911 aa15.95■□□□□ 0.14
RNF220-210ENST00000474394 CLTCL1P53675 1640 aa15.94■□□□□ 0.14
RNF220-210ENST00000474394 HRCP23327 699 aa15.94■□□□□ 0.14
RNF220-210ENST00000474394 FOXD1Q16676 465 aa15.94■□□□□ 0.14
RNF220-210ENST00000474394 ROBO1Q9Y6N7 1651 aa15.94■□□□□ 0.14
RNF220-210ENST00000474394 PLEKHG1Q9ULL1 1385 aa15.93■□□□□ 0.14
RNF220-210ENST00000474394 ZNF326Q5BKZ1 582 aaKnown RBP15.93■□□□□ 0.14
RNF220-210ENST00000474394 NUTM2DQ5VT03 806 aaPredicted RBP15.91■□□□□ 0.14
RNF220-210ENST00000474394 SLC26A8Q96RN1 970 aa15.91■□□□□ 0.14
RNF220-210ENST00000474394 KIF1BO60333 1816 aa15.91■□□□□ 0.14
RNF220-210ENST00000474394 CCDC144AA2RUR9 1427 aa15.89■□□□□ 0.13
RNF220-210ENST00000474394 JCADQ9P266 1359 aa15.87■□□□□ 0.13
RNF220-210ENST00000474394 ZNF772Q68DY9 489 aaPredicted RBP15.87■□□□□ 0.13
RNF220-210ENST00000474394 TMEM94Q12767 1356 aa15.87■□□□□ 0.13
RNF220-210ENST00000474394 PHLPP1O60346 1717 aa15.86■□□□□ 0.13
RNF220-210ENST00000474394 KCNA6P17658 529 aa15.86■□□□□ 0.13
RNF220-210ENST00000474394 TBX22Q9Y458 520 aa15.86■□□□□ 0.13
RNF220-210ENST00000474394 RPGRIP1LQ68CZ1 1315 aa15.86■□□□□ 0.13
RNF220-210ENST00000474394 ADAMTS13Q76LX8 1427 aa15.84■□□□□ 0.13
RNF220-210ENST00000474394 NEXMIFQ5QGS0 1516 aa15.84■□□□□ 0.13
RNF220-210ENST00000474394 VGFO15240 615 aaPredicted RBP15.83■□□□□ 0.12
RNF220-210ENST00000474394 PROSER2Q86WR7 435 aaPredicted RBP15.83■□□□□ 0.12
RNF220-210ENST00000474394 DIP2AQ14689 1571 aa15.83■□□□□ 0.12
RNF220-210ENST00000474394 RXRBP28702 533 aa15.82■□□□□ 0.12
RNF220-210ENST00000474394 MEX3CQ5U5Q3 659 aaKnown RBP15.82■□□□□ 0.12
RNF220-210ENST00000474394 SLAIN2Q9P270 581 aa15.82■□□□□ 0.12
RNF220-210ENST00000474394 RGL3Q3MIN7 710 aa15.81■□□□□ 0.12
RNF220-210ENST00000474394 RBM33Q96EV2 1170 aaKnown RBP15.81■□□□□ 0.12
RNF220-210ENST00000474394 PIK3R4Q99570 1358 aa15.81■□□□□ 0.12
RNF220-210ENST00000474394 NWD1Q149M9 1564 aa15.8■□□□□ 0.12
RNF220-210ENST00000474394 SETBP1Q9Y6X0 1596 aa15.8■□□□□ 0.12
RNF220-210ENST00000474394 SPATA31E1Q6ZUB1 1445 aa15.8■□□□□ 0.12
RNF220-210ENST00000474394 SPATA31A6Q5VVP1 1343 aa15.8■□□□□ 0.12
RNF220-210ENST00000474394 NKTRP30414 1462 aaKnown RBP15.79■□□□□ 0.12
RNF220-210ENST00000474394 ANKRD30BQ9BXX2 1392 aa15.79■□□□□ 0.12
RNF220-210ENST00000474394 TRIM26Q12899 539 aaPredicted RBP15.79■□□□□ 0.12
RNF220-210ENST00000474394 CHD2O14647 1828 aaKnown RBP15.78■□□□□ 0.12
RNF220-210ENST00000474394 LRP6O75581 1613 aa15.78■□□□□ 0.12
RNF220-210ENST00000474394 PPLO60437 1756 aa15.77■□□□□ 0.12
RNF220-210ENST00000474394 MSH6P52701 1360 aa15.77■□□□□ 0.12
RNF220-210ENST00000474394 NRXN3Q9Y4C0 1643 aa15.77■□□□□ 0.12
RNF220-210ENST00000474394 COL16A1Q07092 1604 aaPredicted RBP15.76■□□□□ 0.11
RNF220-210ENST00000474394 CDK12Q9NYV4 1490 aaPredicted RBP15.76■□□□□ 0.11
RNF220-210ENST00000474394 AMOTL2Q9Y2J4 779 aa15.75■□□□□ 0.11
RNF220-210ENST00000474394 METP08581 1390 aa15.74■□□□□ 0.11
RNF220-210ENST00000474394 PTPRUQ92729 1446 aa15.73■□□□□ 0.11
RNF220-210ENST00000474394 ADGRF5Q8IZF2 1346 aa15.72■□□□□ 0.11
RNF220-210ENST00000474394 IFT172Q9UG01 1749 aa15.71■□□□□ 0.11
RNF220-210ENST00000474394 NCOA3Q9Y6Q9 1424 aa15.71■□□□□ 0.11
RNF220-210ENST00000474394 SHPRHQ149N8 1683 aa15.7■□□□□ 0.1
RNF220-210ENST00000474394 C14orf37Q86TY3 774 aa15.7■□□□□ 0.1
RNF220-210ENST00000474394 XRN1Q8IZH2 1706 aaKnown RBP15.69■□□□□ 0.1
RNF220-210ENST00000474394 MYOM2P54296 1465 aa15.67■□□□□ 0.1
RNF220-210ENST00000474394 ZRANB1Q9UGI0 708 aa15.67■□□□□ 0.1
RNF220-210ENST00000474394 PIK3C2GO75747 1445 aa15.67■□□□□ 0.1
RNF220-210ENST00000474394 NUTM2BA6NNL0 878 aaPredicted RBP15.66■□□□□ 0.1
RNF220-210ENST00000474394 NUTM2EB1AL46 878 aaPredicted RBP15.66■□□□□ 0.1
RNF220-210ENST00000474394 NUTM2AQ8IVF1 878 aaPredicted RBP15.66■□□□□ 0.1
RNF220-210ENST00000474394 STAC3Q96MF2 364 aa15.66■□□□□ 0.1
RNF220-210ENST00000474394 AFF2P51816 1311 aa15.66■□□□□ 0.1
RNF220-210ENST00000474394 C19orf44Q9H6X5 657 aa15.65■□□□□ 0.1
RNF220-210ENST00000474394 NRXN1Q9ULB1 1477 aa15.65■□□□□ 0.1
RNF220-210ENST00000474394 AHDC1Q5TGY3 1603 aaPredicted RBP15.65■□□□□ 0.1
RNF220-210ENST00000474394 DCAF11Q8TEB1 546 aa15.64■□□□□ 0.09
RNF220-210ENST00000474394 QTRT2Q9H974 415 aaKnown RBP15.64■□□□□ 0.09
RNF220-210ENST00000474394 KDM2AQ9Y2K7 1162 aa15.64■□□□□ 0.09
RNF220-210ENST00000474394 PTCH1Q13635 1447 aa15.63■□□□□ 0.09
RNF220-210ENST00000474394 ATF3P18847 181 aa15.63■□□□□ 0.09
RNF220-210ENST00000474394 RBM6P78332 1123 aaKnown RBP15.63■□□□□ 0.09
RNF220-210ENST00000474394 CADPS2Q86UW7 1296 aa15.63■□□□□ 0.09
RNF220-210ENST00000474394 C14orf93Q9H972 538 aaKnown RBP15.63■□□□□ 0.09
RNF220-210ENST00000474394 RGS12O14924 1447 aa15.62■□□□□ 0.09
RNF220-210ENST00000474394 PRAG1Q86YV5 1406 aa15.62■□□□□ 0.09
RNF220-210ENST00000474394 DHX57Q6P158 1386 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms