RNA–Protein interactions for RNA: ENST00000474344.1

VANGL1-205, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 2

Gene VANGL1, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-205ENST00000474344 PCGF6Q9BYE7 350 aa15.37■□□□□ 0.05
VANGL1-205ENST00000474344 DMRT2Q9Y5R5 561 aa15.37■□□□□ 0.05
VANGL1-205ENST00000474344 NEXMIFQ5QGS0 1516 aa15.37■□□□□ 0.05
VANGL1-205ENST00000474344 TXNDC2Q86VQ3 553 aa15.36■□□□□ 0.05
VANGL1-205ENST00000474344 DHX57Q6P158 1386 aaKnown RBP15.36■□□□□ 0.05
VANGL1-205ENST00000474344 NPHP4O75161 1426 aaPredicted RBP15.35■□□□□ 0.05
VANGL1-205ENST00000474344 CHGAP10645 457 aaKnown RBP15.34■□□□□ 0.05
VANGL1-205ENST00000474344 STRCP1A6NGW2 1772 aa15.34■□□□□ 0.05
VANGL1-205ENST00000474344 EID1Q9Y6B2 187 aa15.33■□□□□ 0.04
VANGL1-205ENST00000474344 NRXN3Q9Y4C0 1643 aa15.32■□□□□ 0.04
VANGL1-205ENST00000474344 CHD2O14647 1828 aaKnown RBP15.31■□□□□ 0.04
VANGL1-205ENST00000474344 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.31■□□□□ 0.04
VANGL1-205ENST00000474344 RPGRIP1LQ68CZ1 1315 aa15.31■□□□□ 0.04
VANGL1-205ENST00000474344 PLEKHG1Q9ULL1 1385 aa15.31■□□□□ 0.04
VANGL1-205ENST00000474344 SETD1AO15047 1707 aaKnown RBP15.3■□□□□ 0.04
VANGL1-205ENST00000474344 HDGFP51858 240 aaKnown RBP15.3■□□□□ 0.04
VANGL1-205ENST00000474344 LTBP4Q8N2S1 1624 aa15.29■□□□□ 0.04
VANGL1-205ENST00000474344 SETBP1Q9Y6X0 1596 aa15.29■□□□□ 0.04
VANGL1-205ENST00000474344 ADAMTS13Q76LX8 1427 aa15.28■□□□□ 0.04
VANGL1-205ENST00000474344 ZNF326Q5BKZ1 582 aaKnown RBP15.28■□□□□ 0.04
VANGL1-205ENST00000474344 NUTM2DQ5VT03 806 aaPredicted RBP15.27■□□□□ 0.04
VANGL1-205ENST00000474344 RGL3Q3MIN7 710 aa15.26■□□□□ 0.03
VANGL1-205ENST00000474344 DIP2AQ14689 1571 aa15.26■□□□□ 0.03
VANGL1-205ENST00000474344 XIRP1Q702N8 1843 aaKnown RBP15.25■□□□□ 0.03
VANGL1-205ENST00000474344 VGFO15240 615 aaPredicted RBP15.24■□□□□ 0.03
VANGL1-205ENST00000474344 TBX22Q9Y458 520 aa15.24■□□□□ 0.03
VANGL1-205ENST00000474344 NRXN1Q9ULB1 1477 aa15.24■□□□□ 0.03
VANGL1-205ENST00000474344 ZNF335Q9H4Z2 1342 aaPredicted RBP15.23■□□□□ 0.03
VANGL1-205ENST00000474344 PPP1R15AO75807 674 aaPredicted RBP15.23■□□□□ 0.03
VANGL1-205ENST00000474344 SLC26A8Q96RN1 970 aa15.23■□□□□ 0.03
VANGL1-205ENST00000474344 SIN3AQ96ST3 1273 aa15.23■□□□□ 0.03
VANGL1-205ENST00000474344 ADGRF5Q8IZF2 1346 aa15.22■□□□□ 0.03
VANGL1-205ENST00000474344 MYOM2P54296 1465 aa15.22■□□□□ 0.03
VANGL1-205ENST00000474344 ALKQ9UM73 1620 aa15.22■□□□□ 0.03
VANGL1-205ENST00000474344 NWD1Q149M9 1564 aa15.22■□□□□ 0.03
VANGL1-205ENST00000474344 PIK3R4Q99570 1358 aa15.2■□□□□ 0.02
VANGL1-205ENST00000474344 PIK3C2GO75747 1445 aa15.19■□□□□ 0.02
VANGL1-205ENST00000474344 STAC3Q96MF2 364 aa15.19■□□□□ 0.02
VANGL1-205ENST00000474344 XRN1Q8IZH2 1706 aaKnown RBP15.19■□□□□ 0.02
VANGL1-205ENST00000474344 PTPRUQ92729 1446 aa15.18■□□□□ 0.02
VANGL1-205ENST00000474344 CPS1P31327 1500 aa15.18■□□□□ 0.02
VANGL1-205ENST00000474344 SENP3Q9H4L4 574 aaPredicted RBP15.18■□□□□ 0.02
VANGL1-205ENST00000474344 METP08581 1390 aa15.17■□□□□ 0.02
VANGL1-205ENST00000474344 KCNA6P17658 529 aa15.17■□□□□ 0.02
VANGL1-205ENST00000474344 LAMC1P11047 1609 aa15.17■□□□□ 0.02
VANGL1-205ENST00000474344 KIAA1210Q9ULL0 1709 aa15.16■□□□□ 0.02
VANGL1-205ENST00000474344 ASXL1Q8IXJ9 1541 aa15.16■□□□□ 0.02
VANGL1-205ENST00000474344 LRRC7Q96NW7 1537 aa15.16■□□□□ 0.02
VANGL1-205ENST00000474344 CERKQ8TCT0 537 aa15.15■□□□□ 0.02
VANGL1-205ENST00000474344 DCAF11Q8TEB1 546 aa15.15■□□□□ 0.02
VANGL1-205ENST00000474344 BCANQ96GW7 911 aa15.15■□□□□ 0.02
VANGL1-205ENST00000474344 CLSPNQ9HAW4 1339 aa15.15■□□□□ 0.02
VANGL1-205ENST00000474344 IQSEC2Q5JU85 1478 aa15.14■□□□□ 0.01
VANGL1-205ENST00000474344 L3MBTL2Q969R5 705 aa15.14■□□□□ 0.01
VANGL1-205ENST00000474344 C14orf93Q9H972 538 aaKnown RBP15.14■□□□□ 0.01
VANGL1-205ENST00000474344 PRAG1Q86YV5 1406 aa15.14■□□□□ 0.01
VANGL1-205ENST00000474344 NKTRP30414 1462 aaKnown RBP15.14■□□□□ 0.01
VANGL1-205ENST00000474344 NEUROD1Q13562 356 aa15.13■□□□□ 0.01
VANGL1-205ENST00000474344 KNDC1Q76NI1 1749 aa15.12■□□□□ 0.01
VANGL1-205ENST00000474344 ADGRB1O14514 1584 aa15.11■□□□□ 0.01
VANGL1-205ENST00000474344 KDM2AQ9Y2K7 1162 aa15.11■□□□□ 0.01
VANGL1-205ENST00000474344 CFAP70Q5T0N1 1121 aa15.1■□□□□ 0.01
VANGL1-205ENST00000474344 AMOTL2Q9Y2J4 779 aa15.1■□□□□ 0.01
VANGL1-205ENST00000474344 TRPM1Q7Z4N2 1603 aa15.08■□□□□ 0
VANGL1-205ENST00000474344 TECPR2O15040 1411 aa15.08■□□□□ 0
VANGL1-205ENST00000474344 TMEM132EQ6IEE7 984 aa15.07■□□□□ 0
VANGL1-205ENST00000474344 LRPPRCP42704 1394 aaKnown RBP15.07■□□□□ 0
VANGL1-205ENST00000474344 ABCC11Q96J66 1382 aa15.07■□□□□ 0
VANGL1-205ENST00000474344 NCOA3Q9Y6Q9 1424 aa15.07■□□□□ 0
VANGL1-205ENST00000474344 PROSER2Q86WR7 435 aaPredicted RBP15.06■□□□□ 0
VANGL1-205ENST00000474344 TMEM94Q12767 1356 aa15.06■□□□□ 0
VANGL1-205ENST00000474344 PTCH1Q13635 1447 aa15.06■□□□□ 0
VANGL1-205ENST00000474344 YTHDC2Q9H6S0 1430 aaKnown RBP15.06■□□□□ 0
VANGL1-205ENST00000474344 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.06■□□□□ 0
VANGL1-205ENST00000474344 NALCNQ8IZF0 1738 aa15.05■□□□□ -0
VANGL1-205ENST00000474344 ROBO2Q9HCK4 1378 aa15.04■□□□□ -0
VANGL1-205ENST00000474344 ARHGEF28Q8N1W1 1705 aaKnown RBP15.03■□□□□ -0
VANGL1-205ENST00000474344 DLC1Q96QB1 1528 aa15.03■□□□□ -0
VANGL1-205ENST00000474344 TONSLQ96HA7 1378 aa15.03■□□□□ -0
VANGL1-205ENST00000474344 NBPF8Q3BBV2 869 aa15.03■□□□□ -0
VANGL1-205ENST00000474344 CCER1Q8TC90 406 aaPredicted RBP15.03■□□□□ -0
VANGL1-205ENST00000474344 SIRT1Q96EB6 747 aa15.03■□□□□ -0
VANGL1-205ENST00000474344 RBM33Q96EV2 1170 aaKnown RBP15.03■□□□□ -0
VANGL1-205ENST00000474344 NBPF1Q3BBV0 1214 aa15.02■□□□□ -0
VANGL1-205ENST00000474344 TIMELESSQ9UNS1 1208 aa15.02■□□□□ -0
VANGL1-205ENST00000474344 FAM135BQ49AJ0 1406 aa15□□□□□ -0.01
VANGL1-205ENST00000474344 ILDR1Q86SU0 546 aaPredicted RBP15□□□□□ -0.01
VANGL1-205ENST00000474344 STK26Q9P289 416 aa14.99□□□□□ -0.01
VANGL1-205ENST00000474344 FBXO41Q8TF61 875 aa14.98□□□□□ -0.01
VANGL1-205ENST00000474344 ADGRL3Q9HAR2 1447 aa14.98□□□□□ -0.01
VANGL1-205ENST00000474344 GPRASP1Q5JY77 1395 aa14.98□□□□□ -0.01
VANGL1-205ENST00000474344 PLEKHH1Q9ULM0 1364 aa14.98□□□□□ -0.01
VANGL1-205ENST00000474344 WAPLQ7Z5K2 1190 aa14.97□□□□□ -0.01
VANGL1-205ENST00000474344 C19orf44Q9H6X5 657 aa14.97□□□□□ -0.01
VANGL1-205ENST00000474344 DCCP43146 1447 aa14.97□□□□□ -0.01
VANGL1-205ENST00000474344 RALGAPBQ86X10 1494 aa14.96□□□□□ -0.01
VANGL1-205ENST00000474344 RGPD8O14715 1765 aaPredicted RBP14.96□□□□□ -0.01
VANGL1-205ENST00000474344 MSH6P52701 1360 aa14.96□□□□□ -0.02
VANGL1-205ENST00000474344 UBAP1LF5GYI3 381 aa14.94□□□□□ -0.02
VANGL1-205ENST00000474344 TRAK1Q9UPV9 953 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms