RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 JPH4Q96JJ6 628 aa23.92■■□□□ 1.42
ECHDC1-214ENST00000474289 NAP1L5Q96NT1 182 aaPredicted RBP23.92■■□□□ 1.42
ECHDC1-214ENST00000474289 CARMIL2Q6F5E8 1435 aa23.92■■□□□ 1.42
ECHDC1-214ENST00000474289 ATP10BO94823 1461 aa23.91■■□□□ 1.42
ECHDC1-214ENST00000474289 MAPK8IP3Q9UPT6 1336 aa23.91■■□□□ 1.42
ECHDC1-214ENST00000474289 TMF1P82094 1093 aa23.91■■□□□ 1.42
ECHDC1-214ENST00000474289 PNNQ9H307 717 aaKnown RBP23.91■■□□□ 1.42
ECHDC1-214ENST00000474289 CCDC144AA2RUR9 1427 aa23.9■■□□□ 1.42
ECHDC1-214ENST00000474289 SPINK5Q9NQ38 1064 aaPredicted RBP23.9■■□□□ 1.42
ECHDC1-214ENST00000474289 NKTRP30414 1462 aaKnown RBP23.9■■□□□ 1.42
ECHDC1-214ENST00000474289 ABCA8O94911 1581 aa23.9■■□□□ 1.42
ECHDC1-214ENST00000474289 FSD2A1L4K1 749 aa23.9■■□□□ 1.42
ECHDC1-214ENST00000474289 CLCN1P35523 988 aa23.9■■□□□ 1.42
ECHDC1-214ENST00000474289 GOLGA6L3A6NEY3 463 aa23.89■■□□□ 1.42
ECHDC1-214ENST00000474289 A2MP01023 1474 aa23.88■■□□□ 1.41
ECHDC1-214ENST00000474289 PANK2Q9BZ23 570 aa23.88■■□□□ 1.41
ECHDC1-214ENST00000474289 MAGI2Q86UL8 1455 aa23.87■■□□□ 1.41
ECHDC1-214ENST00000474289 SYNJ2O15056 1496 aa23.86■■□□□ 1.41
ECHDC1-214ENST00000474289 ARHGEF5Q12774 1597 aa23.85■■□□□ 1.41
ECHDC1-214ENST00000474289 VSIG10Q8N0Z9 540 aa23.85■■□□□ 1.41
ECHDC1-214ENST00000474289 TBC1D2Q9BYX2 928 aa23.85■■□□□ 1.41
ECHDC1-214ENST00000474289 PLA2R1Q13018 1463 aa23.85■■□□□ 1.41
ECHDC1-214ENST00000474289 CGNL1Q0VF96 1302 aa23.84■■□□□ 1.41
ECHDC1-214ENST00000474289 CCDC146Q8IYE0 955 aa23.84■■□□□ 1.41
ECHDC1-214ENST00000474289 KNSTRNQ9Y448 316 aa23.84■■□□□ 1.41
ECHDC1-214ENST00000474289 WDR7Q9Y4E6 1490 aa23.84■■□□□ 1.41
ECHDC1-214ENST00000474289 HSP90AA2PQ14568 343 aaPredicted RBP23.83■■□□□ 1.41
ECHDC1-214ENST00000474289 CLUAP1Q96AJ1 413 aa23.83■■□□□ 1.41
ECHDC1-214ENST00000474289 ZMYND15Q9H091 742 aa23.83■■□□□ 1.41
ECHDC1-214ENST00000474289 TBC1D32Q96NH3 1257 aa23.83■■□□□ 1.41
ECHDC1-214ENST00000474289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.82■■□□□ 1.48e-8■■■□□ 16.3
ECHDC1-214ENST00000474289 AMER1Q5JTC6 1135 aaPredicted RBP23.82■■□□□ 1.4
ECHDC1-214ENST00000474289 GZF1Q9H116 711 aaPredicted RBP23.82■■□□□ 1.4
ECHDC1-214ENST00000474289 SAMD9LQ8IVG5 1584 aa23.81■■□□□ 1.4
ECHDC1-214ENST00000474289 RRP9O43818 475 aaKnown RBP23.81■■□□□ 1.4
ECHDC1-214ENST00000474289 HSP90AA1P07900 732 aaKnown RBP23.81■■□□□ 1.4
ECHDC1-214ENST00000474289 CCDC141Q6ZP82 1450 aa23.81■■□□□ 1.4
ECHDC1-214ENST00000474289 MCM4P33991 863 aa23.8■■□□□ 1.4
ECHDC1-214ENST00000474289 PDE3AQ14432 1141 aa23.8■■□□□ 1.4
ECHDC1-214ENST00000474289 UPF2Q9HAU5 1272 aaKnown RBP23.8■■□□□ 1.4
ECHDC1-214ENST00000474289 MYO5CQ9NQX4 1742 aa23.79■■□□□ 1.4
ECHDC1-214ENST00000474289 EIF2AK4Q9P2K8 1649 aaKnown RBP23.79■■□□□ 1.4
ECHDC1-214ENST00000474289 APAF1O14727 1248 aa23.79■■□□□ 1.4
ECHDC1-214ENST00000474289 NUP160Q12769 1436 aa23.79■■□□□ 1.4
ECHDC1-214ENST00000474289 E9PSI1 815 aa23.78■■□□□ 1.4
ECHDC1-214ENST00000474289 COG6Q9Y2V7 657 aa23.78■■□□□ 1.4
ECHDC1-214ENST00000474289 PIK3C2GO75747 1445 aa23.78■■□□□ 1.4
ECHDC1-214ENST00000474289 PANK1Q8TE04 598 aa23.78■■□□□ 1.4
ECHDC1-214ENST00000474289 DMRT2Q9Y5R5 561 aa23.76■■□□□ 1.39
ECHDC1-214ENST00000474289 ABCC2Q92887 1545 aa23.76■■□□□ 1.39
ECHDC1-214ENST00000474289 CDC42BPBQ9Y5S2 1711 aa23.76■■□□□ 1.39
ECHDC1-214ENST00000474289 SPRYD3Q8NCJ5 442 aa23.75■■□□□ 1.39
ECHDC1-214ENST00000474289 NINLQ9Y2I6 1382 aa23.75■■□□□ 1.39
ECHDC1-214ENST00000474289 CANXP27824 592 aaKnown RBP23.72■■□□□ 1.39
ECHDC1-214ENST00000474289 MRE11P49959 708 aa23.72■■□□□ 1.39
ECHDC1-214ENST00000474289 RNF17Q9BXT8 1623 aaKnown RBP23.72■■□□□ 1.39
ECHDC1-214ENST00000474289 ASXL1Q8IXJ9 1541 aa23.72■■□□□ 1.39
ECHDC1-214ENST00000474289 CENPJQ9HC77 1338 aaPredicted RBP23.72■■□□□ 1.39
ECHDC1-214ENST00000474289 TRAK2O60296 914 aa23.72■■□□□ 1.39
ECHDC1-214ENST00000474289 UNC13BO14795 1591 aa23.71■■□□□ 1.39
ECHDC1-214ENST00000474289 ZMYM3Q14202 1370 aa23.71■■□□□ 1.39
ECHDC1-214ENST00000474289 SYCP2Q9BX26 1530 aa23.71■■□□□ 1.39
ECHDC1-214ENST00000474289 PREX2Q70Z35 1606 aa23.7■■□□□ 1.39
ECHDC1-214ENST00000474289 PLXNC1O60486 1568 aa23.7■■□□□ 1.39
ECHDC1-214ENST00000474289 SYNMO15061 1565 aa23.69■■□□□ 1.38
ECHDC1-214ENST00000474289 PMFBP1Q8TBY8 1022 aa23.68■■□□□ 1.38
ECHDC1-214ENST00000474289 CHMP5Q9NZZ3 219 aa23.68■■□□□ 1.38
ECHDC1-214ENST00000474289 ERBB4Q15303 1308 aa23.67■■□□□ 1.38
ECHDC1-214ENST00000474289 ESPNB1AK53 854 aa23.67■■□□□ 1.38
ECHDC1-214ENST00000474289 MYH16Q9H6N6 1097 aa23.67■■□□□ 1.38
ECHDC1-214ENST00000474289 GRPEL1Q9HAV7 217 aa23.67■■□□□ 1.38
ECHDC1-214ENST00000474289 PDZRN3Q9UPQ7 1066 aa23.67■■□□□ 1.38
ECHDC1-214ENST00000474289 PCDHB15Q9Y5E8 787 aa23.67■■□□□ 1.38
ECHDC1-214ENST00000474289 RSPH4AQ5TD94 716 aa23.66■■□□□ 1.38
ECHDC1-214ENST00000474289 IQGAP3Q86VI3 1631 aa23.64■■□□□ 1.37
ECHDC1-214ENST00000474289 NPC1L1Q9UHC9 1359 aa23.63■■□□□ 1.37
ECHDC1-214ENST00000474289 RTEL1-TNFRSF6BF6WH68 1400 aa23.63■■□□□ 1.37
ECHDC1-214ENST00000474289 IQGAP1P46940 1657 aa23.61■■□□□ 1.37
ECHDC1-214ENST00000474289 ARHGAP5Q13017 1502 aa23.61■■□□□ 1.37
ECHDC1-214ENST00000474289 MYOM1P52179 1685 aa23.61■■□□□ 1.37
ECHDC1-214ENST00000474289 NGEFQ8N5V2 710 aa23.61■■□□□ 1.37
ECHDC1-214ENST00000474289 RLBP1P12271 317 aa23.6■■□□□ 1.37
ECHDC1-214ENST00000474289 ERCC6Q03468 1493 aa23.6■■□□□ 1.37
ECHDC1-214ENST00000474289 AAMPQ13685 434 aa23.6■■□□□ 1.37
ECHDC1-214ENST00000474289 TTC37Q6PGP7 1564 aa23.6■■□□□ 1.37
ECHDC1-214ENST00000474289 WWC1Q8IX03 1113 aa23.6■■□□□ 1.37
ECHDC1-214ENST00000474289 MAST1Q9Y2H9 1570 aa23.6■■□□□ 1.37
ECHDC1-214ENST00000474289 CDCA8Q53HL2 280 aa23.59■■□□□ 1.37
ECHDC1-214ENST00000474289 C22orf23Q9BZE7 217 aa23.59■■□□□ 1.37
ECHDC1-214ENST00000474289 ISY1Q9ULR0 285 aaKnown RBP23.59■■□□□ 1.37
ECHDC1-214ENST00000474289 DDX11L8A8MPP1 907 aa23.59■■□□□ 1.37
ECHDC1-214ENST00000474289 TNNQ9UQP3 1299 aa23.59■■□□□ 1.37
ECHDC1-214ENST00000474289 RARSP54136 660 aaKnown RBP23.58■■□□□ 1.36
ECHDC1-214ENST00000474289 ZNF692Q9BU19 519 aaPredicted RBP23.57■■□□□ 1.36
ECHDC1-214ENST00000474289 ATP10AO60312 1499 aa23.56■■□□□ 1.36
ECHDC1-214ENST00000474289 MFAP1P55081 439 aaKnown RBP23.55■■□□□ 1.36
ECHDC1-214ENST00000474289 TRIM44Q96DX7 344 aaPredicted RBP23.54■■□□□ 1.36
ECHDC1-214ENST00000474289 RWDD1Q9H446 243 aaPredicted RBP23.54■■□□□ 1.36
ECHDC1-214ENST00000474289 MADDQ8WXG6 1647 aa23.53■■□□□ 1.36
ECHDC1-214ENST00000474289 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms