RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 SPHKAPQ2M3C7 1700 aa30.7■■■□□ 2.5
SNX13-206ENST00000474067 PLEKHG1Q9ULL1 1385 aa30.67■■■□□ 2.5
SNX13-206ENST00000474067 ZFYVE9O95405 1425 aa30.66■■■□□ 2.5
SNX13-206ENST00000474067 MYO5BQ9ULV0 1848 aa30.63■■■□□ 2.49
SNX13-206ENST00000474067 LRRC7Q96NW7 1537 aa30.63■■■□□ 2.49
SNX13-206ENST00000474067 KCNA6P17658 529 aa30.62■■■□□ 2.49
SNX13-206ENST00000474067 TRPM2O94759 1503 aa30.6■■■□□ 2.49
SNX13-206ENST00000474067 SLC4A1APQ9BWU0 796 aaKnown RBP30.6■■■□□ 2.49
SNX13-206ENST00000474067 SLC26A8Q96RN1 970 aa30.59■■■□□ 2.49
SNX13-206ENST00000474067 STRCP1A6NGW2 1772 aa30.59■■■□□ 2.49
SNX13-206ENST00000474067 SCAF1Q9H7N4 1312 aaKnown RBP30.58■■■□□ 2.49
SNX13-206ENST00000474067 DIP2AQ14689 1571 aa30.57■■■□□ 2.48
SNX13-206ENST00000474067 NKTRP30414 1462 aaKnown RBP30.57■■■□□ 2.48
SNX13-206ENST00000474067 TBX22Q9Y458 520 aa30.55■■■□□ 2.48
SNX13-206ENST00000474067 ZNF326Q5BKZ1 582 aaKnown RBP30.54■■■□□ 2.48
SNX13-206ENST00000474067 PIP4K2BP78356 416 aa30.52■■■□□ 2.48
SNX13-206ENST00000474067 NWD1Q149M9 1564 aa30.52■■■□□ 2.48
SNX13-206ENST00000474067 PIK3R4Q99570 1358 aa30.52■■■□□ 2.48
SNX13-206ENST00000474067 KIF1BO60333 1816 aa30.5■■■□□ 2.47
SNX13-206ENST00000474067 PROSER2Q86WR7 435 aaPredicted RBP30.49■■■□□ 2.47
SNX13-206ENST00000474067 CLTCL1P53675 1640 aa30.47■■■□□ 2.47
SNX13-206ENST00000474067 TMEM94Q12767 1356 aa30.45■■■□□ 2.47
SNX13-206ENST00000474067 SETD5Q9C0A6 1442 aa30.44■■■□□ 2.46
SNX13-206ENST00000474067 CHD2O14647 1828 aaKnown RBP30.43■■■□□ 2.46
SNX13-206ENST00000474067 NCOA3Q9Y6Q9 1424 aa30.42■■■□□ 2.46
SNX13-206ENST00000474067 RPGRIP1LQ68CZ1 1315 aa30.42■■■□□ 2.46
SNX13-206ENST00000474067 MSH6P52701 1360 aa30.41■■■□□ 2.46
SNX13-206ENST00000474067 ADAMTS13Q76LX8 1427 aa30.41■■■□□ 2.46
SNX13-206ENST00000474067 NUTM2DQ5VT03 806 aaPredicted RBP30.41■■■□□ 2.46
SNX13-206ENST00000474067 VGFO15240 615 aaPredicted RBP30.39■■■□□ 2.46
SNX13-206ENST00000474067 SETBP1Q9Y6X0 1596 aa30.39■■■□□ 2.46
SNX13-206ENST00000474067 MPHOSPH9Q99550 1183 aa30.38■■■□□ 2.45
SNX13-206ENST00000474067 XIRP1Q702N8 1843 aaKnown RBP30.38■■■□□ 2.45
SNX13-206ENST00000474067 CCDC144AA2RUR9 1427 aa30.38■■■□□ 2.45
SNX13-206ENST00000474067 NEXMIFQ5QGS0 1516 aa30.36■■■□□ 2.45
SNX13-206ENST00000474067 SENP3Q9H4L4 574 aaPredicted RBP30.35■■■□□ 2.45
SNX13-206ENST00000474067 ALKQ9UM73 1620 aa30.33■■■□□ 2.45
SNX13-206ENST00000474067 HSPA1LP34931 641 aa30.33■■■□□ 2.45
SNX13-206ENST00000474067 DISP3Q9P2K9 1392 aa30.31■■■□□ 2.44
SNX13-206ENST00000474067 C14orf37Q86TY3 774 aa30.31■■■□□ 2.44
SNX13-206ENST00000474067 FAM135BQ49AJ0 1406 aa30.3■■■□□ 2.44
SNX13-206ENST00000474067 AMOTL2Q9Y2J4 779 aa30.28■■■□□ 2.44
SNX13-206ENST00000474067 RAB3GAP2Q9H2M9 1393 aa30.27■■■□□ 2.44
SNX13-206ENST00000474067 NRXN3Q9Y4C0 1643 aa30.26■■■□□ 2.44
SNX13-206ENST00000474067 HRCP23327 699 aa30.25■■■□□ 2.43
SNX13-206ENST00000474067 CADPS2Q86UW7 1296 aa30.24■■■□□ 2.43
SNX13-206ENST00000474067 FOXD1Q16676 465 aa30.23■■■□□ 2.43
SNX13-206ENST00000474067 C19orf44Q9H6X5 657 aa30.23■■■□□ 2.43
SNX13-206ENST00000474067 ANKRD30BQ9BXX2 1392 aa30.21■■■□□ 2.43
SNX13-206ENST00000474067 ATF3P18847 181 aa30.21■■■□□ 2.43
SNX13-206ENST00000474067 RBM33Q96EV2 1170 aaKnown RBP30.21■■■□□ 2.43
SNX13-206ENST00000474067 PPLO60437 1756 aa30.2■■■□□ 2.42
SNX13-206ENST00000474067 XRN1Q8IZH2 1706 aaKnown RBP30.19■■■□□ 2.42
SNX13-206ENST00000474067 SLAIN2Q9P270 581 aa30.19■■■□□ 2.42
SNX13-206ENST00000474067 DCCP43146 1447 aa30.18■■■□□ 2.42
SNX13-206ENST00000474067 PTPRUQ92729 1446 aa30.17■■■□□ 2.42
SNX13-206ENST00000474067 METP08581 1390 aa30.16■■■□□ 2.42
SNX13-206ENST00000474067 ROBO1Q9Y6N7 1651 aa30.14■■■□□ 2.42
SNX13-206ENST00000474067 SPATA31E1Q6ZUB1 1445 aa30.13■■■□□ 2.41
SNX13-206ENST00000474067 RGL3Q3MIN7 710 aa30.12■■■□□ 2.41
SNX13-206ENST00000474067 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.11■■■□□ 2.41
SNX13-206ENST00000474067 PTCH1Q13635 1447 aa30.1■■■□□ 2.41
SNX13-206ENST00000474067 MED1Q15648 1581 aaPredicted RBP30.07■■■□□ 2.4
SNX13-206ENST00000474067 PRAG1Q86YV5 1406 aa30.07■■■□□ 2.4
SNX13-206ENST00000474067 IFT172Q9UG01 1749 aa30.05■■■□□ 2.4
SNX13-206ENST00000474067 SETD1AO15047 1707 aaKnown RBP30.05■■■□□ 2.4
SNX13-206ENST00000474067 ADGRL3Q9HAR2 1447 aa30.05■■■□□ 2.4
SNX13-206ENST00000474067 PHF23Q9BUL5 403 aaPredicted RBP30.04■■■□□ 2.4
SNX13-206ENST00000474067 ADGRF5Q8IZF2 1346 aa30■■■□□ 2.39
SNX13-206ENST00000474067 STAC3Q96MF2 364 aa30■■■□□ 2.39
SNX13-206ENST00000474067 PHLPP1O60346 1717 aa29.99■■■□□ 2.39
SNX13-206ENST00000474067 MYOM2P54296 1465 aa29.99■■■□□ 2.39
SNX13-206ENST00000474067 PIK3C2GO75747 1445 aa29.98■■■□□ 2.39
SNX13-206ENST00000474067 LAMC1P11047 1609 aa29.96■■■□□ 2.39
SNX13-206ENST00000474067 JCADQ9P266 1359 aa29.94■■■□□ 2.38
SNX13-206ENST00000474067 AHDC1Q5TGY3 1603 aaPredicted RBP29.93■■■□□ 2.38
SNX13-206ENST00000474067 ROBO2Q9HCK4 1378 aa29.92■■■□□ 2.38
SNX13-206ENST00000474067 MST1RQ04912 1400 aa29.92■■■□□ 2.38
SNX13-206ENST00000474067 NALCNQ8IZF0 1738 aa29.92■■■□□ 2.38
SNX13-206ENST00000474067 LRPPRCP42704 1394 aaKnown RBP29.91■■■□□ 2.38
SNX13-206ENST00000474067 TECPR2O15040 1411 aa29.91■■■□□ 2.38
SNX13-206ENST00000474067 BRINP3Q76B58 766 aa29.9■■■□□ 2.38
SNX13-206ENST00000474067 ABCC11Q96J66 1382 aa29.9■■■□□ 2.38
SNX13-206ENST00000474067 NRXN1Q9ULB1 1477 aa29.89■■■□□ 2.38
SNX13-206ENST00000474067 DHX57Q6P158 1386 aaKnown RBP29.89■■■□□ 2.37
SNX13-206ENST00000474067 KNDC1Q76NI1 1749 aa29.88■■■□□ 2.37
SNX13-206ENST00000474067 ASXL1Q8IXJ9 1541 aa29.87■■■□□ 2.37
SNX13-206ENST00000474067 C14orf93Q9H972 538 aaKnown RBP29.87■■■□□ 2.37
SNX13-206ENST00000474067 COL16A1Q07092 1604 aaPredicted RBP29.86■■■□□ 2.37
SNX13-206ENST00000474067 SPATA31A6Q5VVP1 1343 aa29.85■■■□□ 2.37
SNX13-206ENST00000474067 SIRT1Q96EB6 747 aa29.84■■■□□ 2.37
SNX13-206ENST00000474067 STK26Q9P289 416 aa29.84■■■□□ 2.37
SNX13-206ENST00000474067 YTHDC2Q9H6S0 1430 aaKnown RBP29.84■■■□□ 2.37
SNX13-206ENST00000474067 ILDR2Q71H61 639 aa29.83■■■□□ 2.37
SNX13-206ENST00000474067 CDC42BPGQ6DT37 1551 aa29.82■■■□□ 2.36
SNX13-206ENST00000474067 C1orf167Q5SNV9 1468 aa29.81■■■□□ 2.36
SNX13-206ENST00000474067 DCAF11Q8TEB1 546 aa29.8■■■□□ 2.36
SNX13-206ENST00000474067 SOCS7O14512 581 aa29.79■■■□□ 2.36
SNX13-206ENST00000474067 TMEM132EQ6IEE7 984 aa29.79■■■□□ 2.36
SNX13-206ENST00000474067 LRRC59Q96AG4 307 aaKnown RBP29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms