RNA–Protein interactions for RNA: ENST00000474000.5

COL16A1-210, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-210ENST00000474000 RPRD2Q5VT52 1461 aaKnown RBP18.45■□□□□ 0.54
COL16A1-210ENST00000474000 ROCK1Q13464 1354 aa18.44■□□□□ 0.54
COL16A1-210ENST00000474000 HDGFP51858 240 aaKnown RBP18.44■□□□□ 0.54
COL16A1-210ENST00000474000 POTEAQ6S8J7 498 aa18.44■□□□□ 0.54
COL16A1-210ENST00000474000 KDM5AP29375 1690 aaKnown RBP18.43■□□□□ 0.54
COL16A1-210ENST00000474000 PPP1R15AO75807 674 aaPredicted RBP18.41■□□□□ 0.54
COL16A1-210ENST00000474000 CHGAP10645 457 aaKnown RBP18.41■□□□□ 0.54
COL16A1-210ENST00000474000 ADGRB3O60242 1522 aa18.4■□□□□ 0.54
COL16A1-210ENST00000474000 ROBO1Q9Y6N7 1651 aa18.39■□□□□ 0.53
COL16A1-210ENST00000474000 NUP155O75694 1391 aa18.39■□□□□ 0.53
COL16A1-210ENST00000474000 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.38■□□□□ 0.53
COL16A1-210ENST00000474000 SLAIN2Q9P270 581 aa18.38■□□□□ 0.53
COL16A1-210ENST00000474000 ZFYVE9O95405 1425 aa18.38■□□□□ 0.53
COL16A1-210ENST00000474000 RIMS2Q9UQ26 1411 aa18.38■□□□□ 0.53
COL16A1-210ENST00000474000 MSH6P52701 1360 aa18.37■□□□□ 0.53
COL16A1-210ENST00000474000 PLEKHG1Q9ULL1 1385 aa18.37■□□□□ 0.53
COL16A1-210ENST00000474000 NKTRP30414 1462 aaKnown RBP18.36■□□□□ 0.53
COL16A1-210ENST00000474000 NUTM2DQ5VT03 806 aaPredicted RBP18.36■□□□□ 0.53
COL16A1-210ENST00000474000 TBX22Q9Y458 520 aa18.36■□□□□ 0.53
COL16A1-210ENST00000474000 NWD1Q149M9 1564 aa18.35■□□□□ 0.53
COL16A1-210ENST00000474000 UNC13BO14795 1591 aa18.33■□□□□ 0.52
COL16A1-210ENST00000474000 TMEM131LA2VDJ0 1609 aa18.3■□□□□ 0.52
COL16A1-210ENST00000474000 CHD2O14647 1828 aaKnown RBP18.3■□□□□ 0.52
COL16A1-210ENST00000474000 JCADQ9P266 1359 aa18.3■□□□□ 0.52
COL16A1-210ENST00000474000 MYO5BQ9ULV0 1848 aa18.29■□□□□ 0.52
COL16A1-210ENST00000474000 PHLPP1O60346 1717 aa18.28■□□□□ 0.52
COL16A1-210ENST00000474000 ADAMTS13Q76LX8 1427 aa18.27■□□□□ 0.52
COL16A1-210ENST00000474000 C14orf37Q86TY3 774 aa18.27■□□□□ 0.52
COL16A1-210ENST00000474000 GCC2Q8IWJ2 1684 aa18.27■□□□□ 0.52
COL16A1-210ENST00000474000 E9PCH4 1651 aa18.26■□□□□ 0.51
COL16A1-210ENST00000474000 IQGAP3Q86VI3 1631 aa18.26■□□□□ 0.51
COL16A1-210ENST00000474000 NCOA3Q9Y6Q9 1424 aa18.25■□□□□ 0.51
COL16A1-210ENST00000474000 C19orf44Q9H6X5 657 aa18.24■□□□□ 0.51
COL16A1-210ENST00000474000 AMOTL2Q9Y2J4 779 aa18.24■□□□□ 0.51
COL16A1-210ENST00000474000 PIK3R4Q99570 1358 aa18.23■□□□□ 0.51
COL16A1-210ENST00000474000 ZNF326Q5BKZ1 582 aaKnown RBP18.23■□□□□ 0.51
COL16A1-210ENST00000474000 CADPS2Q86UW7 1296 aa18.23■□□□□ 0.51
COL16A1-210ENST00000474000 ATF3P18847 181 aa18.22■□□□□ 0.51
COL16A1-210ENST00000474000 COL16A1Q07092 1604 aaPredicted RBP18.22■□□□□ 0.51
COL16A1-210ENST00000474000 RRBP1Q9P2E9 1410 aaKnown RBP18.21■□□□□ 0.51
COL16A1-210ENST00000474000 SPATA31A6Q5VVP1 1343 aa18.21■□□□□ 0.51
COL16A1-210ENST00000474000 LRP6O75581 1613 aa18.2■□□□□ 0.5
COL16A1-210ENST00000474000 MEX3CQ5U5Q3 659 aaKnown RBP18.2■□□□□ 0.5
COL16A1-210ENST00000474000 SETD1AO15047 1707 aaKnown RBP18.2■□□□□ 0.5
COL16A1-210ENST00000474000 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.18■□□□□ 0.5
COL16A1-210ENST00000474000 PTPRUQ92729 1446 aa18.18■□□□□ 0.5
COL16A1-210ENST00000474000 NAIPQ13075 1403 aa18.17■□□□□ 0.5
COL16A1-210ENST00000474000 ZNF772Q68DY9 489 aaPredicted RBP18.17■□□□□ 0.5
COL16A1-210ENST00000474000 BRINP3Q76B58 766 aa18.17■□□□□ 0.5
COL16A1-210ENST00000474000 TRIM52Q96A61 297 aa18.17■□□□□ 0.5
COL16A1-210ENST00000474000 DIP2AQ14689 1571 aa18.15■□□□□ 0.5
COL16A1-210ENST00000474000 AHDC1Q5TGY3 1603 aaPredicted RBP18.15■□□□□ 0.5
COL16A1-210ENST00000474000 NUTM2BA6NNL0 878 aaPredicted RBP18.14■□□□□ 0.49
COL16A1-210ENST00000474000 NUTM2EB1AL46 878 aaPredicted RBP18.14■□□□□ 0.49
COL16A1-210ENST00000474000 NUTM2AQ8IVF1 878 aaPredicted RBP18.14■□□□□ 0.49
COL16A1-210ENST00000474000 UPF1Q92900 1129 aaKnown RBP eCLIP18.14■□□□□ 0.49
COL16A1-210ENST00000474000 METP08581 1390 aa18.14■□□□□ 0.49
COL16A1-210ENST00000474000 TRPM2O94759 1503 aa18.13■□□□□ 0.49
COL16A1-210ENST00000474000 RXRBP28702 533 aa18.11■□□□□ 0.49
COL16A1-210ENST00000474000 SLC4A1APQ9BWU0 796 aaKnown RBP18.11■□□□□ 0.49
COL16A1-210ENST00000474000 SHPRHQ149N8 1683 aa18.1■□□□□ 0.49
COL16A1-210ENST00000474000 HFM1A2PYH4 1435 aa18.09■□□□□ 0.49
COL16A1-210ENST00000474000 VGFO15240 615 aaPredicted RBP18.09■□□□□ 0.49
COL16A1-210ENST00000474000 SETBP1Q9Y6X0 1596 aa18.08■□□□□ 0.49
COL16A1-210ENST00000474000 DDX17Q92841 729 aaKnown RBP18.08■□□□□ 0.48
COL16A1-210ENST00000474000 DCCP43146 1447 aa18.07■□□□□ 0.48
COL16A1-210ENST00000474000 NRXN3Q9Y4C0 1643 aa18.07■□□□□ 0.48
COL16A1-210ENST00000474000 MST1RQ04912 1400 aa18.06■□□□□ 0.48
COL16A1-210ENST00000474000 SPHKAPQ2M3C7 1700 aa18.06■□□□□ 0.48
COL16A1-210ENST00000474000 AFF2P51816 1311 aa18.06■□□□□ 0.48
COL16A1-210ENST00000474000 ASXL1Q8IXJ9 1541 aa18.06■□□□□ 0.48
COL16A1-210ENST00000474000 SETD5Q9C0A6 1442 aa18.06■□□□□ 0.48
COL16A1-210ENST00000474000 RPGRIP1LQ68CZ1 1315 aa18.05■□□□□ 0.48
COL16A1-210ENST00000474000 LRRC59Q96AG4 307 aaKnown RBP18.05■□□□□ 0.48
COL16A1-210ENST00000474000 CLTCL1P53675 1640 aa18.05■□□□□ 0.48
COL16A1-210ENST00000474000 NEXMIFQ5QGS0 1516 aa18.04■□□□□ 0.48
COL16A1-210ENST00000474000 XRN1Q8IZH2 1706 aaKnown RBP18.04■□□□□ 0.48
COL16A1-210ENST00000474000 FOXD1Q16676 465 aa18.04■□□□□ 0.48
COL16A1-210ENST00000474000 C8orf37Q96NL8 207 aa18.02■□□□□ 0.48
COL16A1-210ENST00000474000 QTRT2Q9H974 415 aaKnown RBP18.01■□□□□ 0.47
COL16A1-210ENST00000474000 NHSL1Q5SYE7 1610 aa18■□□□□ 0.47
COL16A1-210ENST00000474000 ADGRL3Q9HAR2 1447 aa17.99■□□□□ 0.47
COL16A1-210ENST00000474000 PNPLA6Q8IY17 1366 aa17.99■□□□□ 0.47
COL16A1-210ENST00000474000 CDK12Q9NYV4 1490 aaPredicted RBP17.99■□□□□ 0.47
COL16A1-210ENST00000474000 MPHOSPH9Q99550 1183 aa17.98■□□□□ 0.47
COL16A1-210ENST00000474000 ROBO2Q9HCK4 1378 aa17.98■□□□□ 0.47
COL16A1-210ENST00000474000 RBM6P78332 1123 aaKnown RBP17.97■□□□□ 0.47
COL16A1-210ENST00000474000 ADAMTS2O95450 1211 aa17.96■□□□□ 0.47
COL16A1-210ENST00000474000 RGL3Q3MIN7 710 aa17.96■□□□□ 0.47
COL16A1-210ENST00000474000 C1orf167Q5SNV9 1468 aa17.95■□□□□ 0.46
COL16A1-210ENST00000474000 NGLY1Q96IV0 654 aa17.95■□□□□ 0.46
COL16A1-210ENST00000474000 ORAI2Q96SN7 254 aa17.95■□□□□ 0.46
COL16A1-210ENST00000474000 RGS12O14924 1447 aa17.94■□□□□ 0.46
COL16A1-210ENST00000474000 PTCH1Q13635 1447 aa17.94■□□□□ 0.46
COL16A1-210ENST00000474000 ADGRF5Q8IZF2 1346 aa17.94■□□□□ 0.46
COL16A1-210ENST00000474000 NALCNQ8IZF0 1738 aa17.93■□□□□ 0.46
COL16A1-210ENST00000474000 CCDC144AA2RUR9 1427 aa17.92■□□□□ 0.46
COL16A1-210ENST00000474000 SOS2Q07890 1332 aaPredicted RBP17.92■□□□□ 0.46
COL16A1-210ENST00000474000 KIF1BO60333 1816 aa17.91■□□□□ 0.46
COL16A1-210ENST00000474000 PRAG1Q86YV5 1406 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms