RNA–Protein interactions for RNA: ENST00000473996.1

PLXNB1-213, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 1,034 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-213ENST00000473996 SLC4A1APQ9BWU0 796 aaKnown RBP22.4■■□□□ 1.18
PLXNB1-213ENST00000473996 MYO5BQ9ULV0 1848 aa22.4■■□□□ 1.18
PLXNB1-213ENST00000473996 HSPA1LP34931 641 aa22.37■■□□□ 1.17
PLXNB1-213ENST00000473996 TMEM131LA2VDJ0 1609 aa22.36■■□□□ 1.17
PLXNB1-213ENST00000473996 XIRP1Q702N8 1843 aaKnown RBP22.36■■□□□ 1.17
PLXNB1-213ENST00000473996 ZFYVE9O95405 1425 aa22.35■■□□□ 1.17
PLXNB1-213ENST00000473996 SLC26A8Q96RN1 970 aa22.34■■□□□ 1.17
PLXNB1-213ENST00000473996 KCNA6P17658 529 aa22.33■■□□□ 1.17
PLXNB1-213ENST00000473996 HRCP23327 699 aa22.33■■□□□ 1.17
PLXNB1-213ENST00000473996 MPHOSPH9Q99550 1183 aa22.33■■□□□ 1.17
PLXNB1-213ENST00000473996 RIMS2Q9UQ26 1411 aa22.32■■□□□ 1.16
PLXNB1-213ENST00000473996 HDGFP51858 240 aaKnown RBP22.32■■□□□ 1.16
PLXNB1-213ENST00000473996 PLEKHG1Q9ULL1 1385 aa22.31■■□□□ 1.16
PLXNB1-213ENST00000473996 CHGAP10645 457 aaKnown RBP22.31■■□□□ 1.16
PLXNB1-213ENST00000473996 ILDR2Q71H61 639 aa22.31■■□□□ 1.16
PLXNB1-213ENST00000473996 RAB3GAP2Q9H2M9 1393 aa22.3■■□□□ 1.16
PLXNB1-213ENST00000473996 BCANQ96GW7 911 aa22.29■■□□□ 1.16
PLXNB1-213ENST00000473996 NWD1Q149M9 1564 aa22.29■■□□□ 1.16
PLXNB1-213ENST00000473996 PPP1R15AO75807 674 aaPredicted RBP22.28■■□□□ 1.16
PLXNB1-213ENST00000473996 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.28■■□□□ 1.16
PLXNB1-213ENST00000473996 NKTRP30414 1462 aaKnown RBP22.28■■□□□ 1.16
PLXNB1-213ENST00000473996 TMEM94Q12767 1356 aa22.27■■□□□ 1.16
PLXNB1-213ENST00000473996 TRIM26Q12899 539 aaPredicted RBP22.25■■□□□ 1.15
PLXNB1-213ENST00000473996 SPHKAPQ2M3C7 1700 aa22.24■■□□□ 1.15
PLXNB1-213ENST00000473996 FOXD1Q16676 465 aa22.24■■□□□ 1.15
PLXNB1-213ENST00000473996 PROSER2Q86WR7 435 aaPredicted RBP22.24■■□□□ 1.15
PLXNB1-213ENST00000473996 CHD2O14647 1828 aaKnown RBP22.24■■□□□ 1.15
PLXNB1-213ENST00000473996 MED1Q15648 1581 aaPredicted RBP22.22■■□□□ 1.15
PLXNB1-213ENST00000473996 SENP3Q9H4L4 574 aaPredicted RBP22.22■■□□□ 1.15
PLXNB1-213ENST00000473996 TBX22Q9Y458 520 aa22.22■■□□□ 1.15
PLXNB1-213ENST00000473996 DIP2AQ14689 1571 aa22.2■■□□□ 1.14
PLXNB1-213ENST00000473996 FAM135BQ49AJ0 1406 aa22.18■■□□□ 1.14
PLXNB1-213ENST00000473996 ADAMTS13Q76LX8 1427 aa22.18■■□□□ 1.14
PLXNB1-213ENST00000473996 NUTM2DQ5VT03 806 aaPredicted RBP22.18■■□□□ 1.14
PLXNB1-213ENST00000473996 RBM33Q96EV2 1170 aaKnown RBP22.18■■□□□ 1.14
PLXNB1-213ENST00000473996 SOCS7O14512 581 aa22.17■■□□□ 1.14
PLXNB1-213ENST00000473996 ZNF326Q5BKZ1 582 aaKnown RBP22.17■■□□□ 1.14
PLXNB1-213ENST00000473996 MSH6P52701 1360 aa22.15■■□□□ 1.14
PLXNB1-213ENST00000473996 PIK3R4Q99570 1358 aa22.15■■□□□ 1.14
PLXNB1-213ENST00000473996 TRPM2O94759 1503 aa22.13■■□□□ 1.13
PLXNB1-213ENST00000473996 NCOA3Q9Y6Q9 1424 aa22.13■■□□□ 1.13
PLXNB1-213ENST00000473996 ROBO1Q9Y6N7 1651 aa22.12■■□□□ 1.13
PLXNB1-213ENST00000473996 CLTCL1P53675 1640 aa22.12■■□□□ 1.13
PLXNB1-213ENST00000473996 SETBP1Q9Y6X0 1596 aa22.09■■□□□ 1.13
PLXNB1-213ENST00000473996 KIF1BO60333 1816 aa22.09■■□□□ 1.13
PLXNB1-213ENST00000473996 CCDC144AA2RUR9 1427 aa22.08■■□□□ 1.13
PLXNB1-213ENST00000473996 NRXN3Q9Y4C0 1643 aa22.08■■□□□ 1.13
PLXNB1-213ENST00000473996 RPGRIP1LQ68CZ1 1315 aa22.06■■□□□ 1.12
PLXNB1-213ENST00000473996 PHF23Q9BUL5 403 aaPredicted RBP22.06■■□□□ 1.12
PLXNB1-213ENST00000473996 SLAIN2Q9P270 581 aa22.06■■□□□ 1.12
PLXNB1-213ENST00000473996 PTPRUQ92729 1446 aa22.06■■□□□ 1.12
PLXNB1-213ENST00000473996 AMOTL2Q9Y2J4 779 aa22.05■■□□□ 1.12
PLXNB1-213ENST00000473996 NEXMIFQ5QGS0 1516 aa22.05■■□□□ 1.12
PLXNB1-213ENST00000473996 RGL3Q3MIN7 710 aa22.04■■□□□ 1.12
PLXNB1-213ENST00000473996 C14orf37Q86TY3 774 aa22.04■■□□□ 1.12
PLXNB1-213ENST00000473996 VGFO15240 615 aaPredicted RBP22.03■■□□□ 1.12
PLXNB1-213ENST00000473996 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.03■■□□□ 1.12
PLXNB1-213ENST00000473996 C19orf44Q9H6X5 657 aa22.02■■□□□ 1.12
PLXNB1-213ENST00000473996 XRN1Q8IZH2 1706 aaKnown RBP22.02■■□□□ 1.12
PLXNB1-213ENST00000473996 ANKRD30BQ9BXX2 1392 aa22.01■■□□□ 1.11
PLXNB1-213ENST00000473996 CADPS2Q86UW7 1296 aa22■■□□□ 1.11
PLXNB1-213ENST00000473996 PHLPP1O60346 1717 aa21.99■■□□□ 1.11
PLXNB1-213ENST00000473996 METP08581 1390 aa21.99■■□□□ 1.11
PLXNB1-213ENST00000473996 ATF3P18847 181 aa21.98■■□□□ 1.11
PLXNB1-213ENST00000473996 DCCP43146 1447 aa21.96■■□□□ 1.11
PLXNB1-213ENST00000473996 SPATA31E1Q6ZUB1 1445 aa21.93■■□□□ 1.1
PLXNB1-213ENST00000473996 COL16A1Q07092 1604 aaPredicted RBP21.92■■□□□ 1.1
PLXNB1-213ENST00000473996 JCADQ9P266 1359 aa21.92■■□□□ 1.1
PLXNB1-213ENST00000473996 PCGF6Q9BYE7 350 aa21.92■■□□□ 1.1
PLXNB1-213ENST00000473996 PPLO60437 1756 aa21.92■■□□□ 1.1
PLXNB1-213ENST00000473996 SETD1AO15047 1707 aaKnown RBP21.91■■□□□ 1.1
PLXNB1-213ENST00000473996 AHDC1Q5TGY3 1603 aaPredicted RBP21.91■■□□□ 1.1
PLXNB1-213ENST00000473996 RGS17Q9UGC6 210 aaPredicted RBP21.9■■□□□ 1.1
PLXNB1-213ENST00000473996 ADGRL3Q9HAR2 1447 aa21.89■■□□□ 1.09
PLXNB1-213ENST00000473996 ADGRF5Q8IZF2 1346 aa21.87■■□□□ 1.09
PLXNB1-213ENST00000473996 BRINP3Q76B58 766 aa21.87■■□□□ 1.09
PLXNB1-213ENST00000473996 MST1RQ04912 1400 aa21.86■■□□□ 1.09
PLXNB1-213ENST00000473996 PTCH1Q13635 1447 aa21.86■■□□□ 1.09
PLXNB1-213ENST00000473996 NALCNQ8IZF0 1738 aa21.86■■□□□ 1.09
PLXNB1-213ENST00000473996 DCAF11Q8TEB1 546 aa21.85■■□□□ 1.09
PLXNB1-213ENST00000473996 STAC3Q96MF2 364 aa21.85■■□□□ 1.09
PLXNB1-213ENST00000473996 PRAG1Q86YV5 1406 aa21.84■■□□□ 1.09
PLXNB1-213ENST00000473996 KDM2AQ9Y2K7 1162 aa21.84■■□□□ 1.09
PLXNB1-213ENST00000473996 DHX57Q6P158 1386 aaKnown RBP21.84■■□□□ 1.09
PLXNB1-213ENST00000473996 ASXL1Q8IXJ9 1541 aa21.83■■□□□ 1.09
PLXNB1-213ENST00000473996 SHPRHQ149N8 1683 aa21.82■■□□□ 1.08
PLXNB1-213ENST00000473996 SPATA31A6Q5VVP1 1343 aa21.81■■□□□ 1.08
PLXNB1-213ENST00000473996 ROBO2Q9HCK4 1378 aa21.81■■□□□ 1.08
PLXNB1-213ENST00000473996 NEUROD1Q13562 356 aa21.8■■□□□ 1.08
PLXNB1-213ENST00000473996 SIN3AQ96ST3 1273 aa21.8■■□□□ 1.08
PLXNB1-213ENST00000473996 IFT172Q9UG01 1749 aa21.79■■□□□ 1.08
PLXNB1-213ENST00000473996 NHSL1Q5SYE7 1610 aa21.79■■□□□ 1.08
PLXNB1-213ENST00000473996 POTEAQ6S8J7 498 aa21.78■■□□□ 1.08
PLXNB1-213ENST00000473996 C14orf93Q9H972 538 aaKnown RBP21.78■■□□□ 1.08
PLXNB1-213ENST00000473996 LRP6O75581 1613 aa21.76■■□□□ 1.07
PLXNB1-213ENST00000473996 CFAP70Q5T0N1 1121 aa21.75■■□□□ 1.07
PLXNB1-213ENST00000473996 C1orf167Q5SNV9 1468 aa21.74■■□□□ 1.07
PLXNB1-213ENST00000473996 TMEM132EQ6IEE7 984 aa21.73■■□□□ 1.07
PLXNB1-213ENST00000473996 STK26Q9P289 416 aa21.72■■□□□ 1.07
PLXNB1-213ENST00000473996 PIK3C2GO75747 1445 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms