RNA–Protein interactions for RNA: ENST00000473777.5

RAPGEF3-207, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 726 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-207ENST00000473777 MYO5BQ9ULV0 1848 aa24.48■■□□□ 1.51
RAPGEF3-207ENST00000473777 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.47■■□□□ 1.51
RAPGEF3-207ENST00000473777 RIMS2Q9UQ26 1411 aa24.46■■□□□ 1.51
RAPGEF3-207ENST00000473777 PROSER2Q86WR7 435 aaPredicted RBP24.45■■□□□ 1.5
RAPGEF3-207ENST00000473777 TMEM131LA2VDJ0 1609 aa24.45■■□□□ 1.5
RAPGEF3-207ENST00000473777 RRBP1Q9P2E9 1410 aaKnown RBP24.44■■□□□ 1.5
RAPGEF3-207ENST00000473777 PLEKHG1Q9ULL1 1385 aa24.43■■□□□ 1.5
RAPGEF3-207ENST00000473777 ZFYVE9O95405 1425 aa24.43■■□□□ 1.5
RAPGEF3-207ENST00000473777 ALKQ9UM73 1620 aa24.43■■□□□ 1.5
RAPGEF3-207ENST00000473777 SENP3Q9H4L4 574 aaPredicted RBP24.42■■□□□ 1.5
RAPGEF3-207ENST00000473777 XIRP1Q702N8 1843 aaKnown RBP24.41■■□□□ 1.5
RAPGEF3-207ENST00000473777 ILDR2Q71H61 639 aa24.41■■□□□ 1.5
RAPGEF3-207ENST00000473777 TMEM94Q12767 1356 aa24.41■■□□□ 1.5
RAPGEF3-207ENST00000473777 NKTRP30414 1462 aaKnown RBP24.38■■□□□ 1.49
RAPGEF3-207ENST00000473777 TBX22Q9Y458 520 aa24.36■■□□□ 1.49
RAPGEF3-207ENST00000473777 NWD1Q149M9 1564 aa24.35■■□□□ 1.49
RAPGEF3-207ENST00000473777 SPHKAPQ2M3C7 1700 aa24.35■■□□□ 1.49
RAPGEF3-207ENST00000473777 NUTM2DQ5VT03 806 aaPredicted RBP24.34■■□□□ 1.49
RAPGEF3-207ENST00000473777 NAIPQ13075 1403 aa24.33■■□□□ 1.49
RAPGEF3-207ENST00000473777 CHD2O14647 1828 aaKnown RBP24.33■■□□□ 1.48
RAPGEF3-207ENST00000473777 MSH6P52701 1360 aa24.32■■□□□ 1.48
RAPGEF3-207ENST00000473777 ZNF326Q5BKZ1 582 aaKnown RBP24.32■■□□□ 1.48
RAPGEF3-207ENST00000473777 RBM33Q96EV2 1170 aaKnown RBP24.32■■□□□ 1.48
RAPGEF3-207ENST00000473777 SOCS7O14512 581 aa24.31■■□□□ 1.48
RAPGEF3-207ENST00000473777 MED1Q15648 1581 aaPredicted RBP24.31■■□□□ 1.48
RAPGEF3-207ENST00000473777 TRIM52Q96A61 297 aa24.31■■□□□ 1.48
RAPGEF3-207ENST00000473777 DIP2AQ14689 1571 aa24.29■■□□□ 1.48
RAPGEF3-207ENST00000473777 PHF23Q9BUL5 403 aaPredicted RBP24.29■■□□□ 1.48
RAPGEF3-207ENST00000473777 FAM135BQ49AJ0 1406 aa24.28■■□□□ 1.48
RAPGEF3-207ENST00000473777 C14orf37Q86TY3 774 aa24.27■■□□□ 1.48
RAPGEF3-207ENST00000473777 PIK3R4Q99570 1358 aa24.27■■□□□ 1.48
RAPGEF3-207ENST00000473777 HFM1A2PYH4 1435 aa24.26■■□□□ 1.47
RAPGEF3-207ENST00000473777 ADAMTS13Q76LX8 1427 aa24.25■■□□□ 1.47
RAPGEF3-207ENST00000473777 TRPM2O94759 1503 aa24.24■■□□□ 1.47
RAPGEF3-207ENST00000473777 NCOA3Q9Y6Q9 1424 aa24.23■■□□□ 1.47
RAPGEF3-207ENST00000473777 SLAIN2Q9P270 581 aa24.22■■□□□ 1.47
RAPGEF3-207ENST00000473777 KIF1BO60333 1816 aa24.21■■□□□ 1.47
RAPGEF3-207ENST00000473777 ROBO1Q9Y6N7 1651 aa24.21■■□□□ 1.47
RAPGEF3-207ENST00000473777 SLC4A1APQ9BWU0 796 aaKnown RBP24.21■■□□□ 1.47
RAPGEF3-207ENST00000473777 AMOTL2Q9Y2J4 779 aa24.19■■□□□ 1.46
RAPGEF3-207ENST00000473777 CLTCL1P53675 1640 aa24.19■■□□□ 1.46
RAPGEF3-207ENST00000473777 ATF3P18847 181 aa24.16■■□□□ 1.46
RAPGEF3-207ENST00000473777 CADPS2Q86UW7 1296 aa24.16■■□□□ 1.46
RAPGEF3-207ENST00000473777 C19orf44Q9H6X5 657 aa24.16■■□□□ 1.46
RAPGEF3-207ENST00000473777 SETBP1Q9Y6X0 1596 aa24.15■■□□□ 1.46
RAPGEF3-207ENST00000473777 VGFO15240 615 aaPredicted RBP24.11■■□□□ 1.45
RAPGEF3-207ENST00000473777 PTPRUQ92729 1446 aa24.1■■□□□ 1.45
RAPGEF3-207ENST00000473777 NEXMIFQ5QGS0 1516 aa24.1■■□□□ 1.45
RAPGEF3-207ENST00000473777 NRXN3Q9Y4C0 1643 aa24.1■■□□□ 1.45
RAPGEF3-207ENST00000473777 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.1■■□□□ 1.45
RAPGEF3-207ENST00000473777 PHLPP1O60346 1717 aa24.1■■□□□ 1.45
RAPGEF3-207ENST00000473777 RPGRIP1LQ68CZ1 1315 aa24.09■■□□□ 1.45
RAPGEF3-207ENST00000473777 ACIN1Q9UKV3 1341 aaKnown RBP24.07■■□□□ 1.44
RAPGEF3-207ENST00000473777 XRN1Q8IZH2 1706 aaKnown RBP24.06■■□□□ 1.44
RAPGEF3-207ENST00000473777 METP08581 1390 aa24.05■■□□□ 1.44
RAPGEF3-207ENST00000473777 JCADQ9P266 1359 aa24.03■■□□□ 1.44
RAPGEF3-207ENST00000473777 DCCP43146 1447 aa24.03■■□□□ 1.44
RAPGEF3-207ENST00000473777 FOXD1Q16676 465 aa24.02■■□□□ 1.44
RAPGEF3-207ENST00000473777 MPHOSPH9Q99550 1183 aa24.01■■□□□ 1.43
RAPGEF3-207ENST00000473777 CCDC144AA2RUR9 1427 aa24.01■■□□□ 1.43
RAPGEF3-207ENST00000473777 PPLO60437 1756 aa23.97■■□□□ 1.43
RAPGEF3-207ENST00000473777 COL16A1Q07092 1604 aaPredicted RBP23.96■■□□□ 1.43
RAPGEF3-207ENST00000473777 AHDC1Q5TGY3 1603 aaPredicted RBP23.95■■□□□ 1.43
RAPGEF3-207ENST00000473777 ADGRL3Q9HAR2 1447 aa23.95■■□□□ 1.42
RAPGEF3-207ENST00000473777 RGL3Q3MIN7 710 aa23.95■■□□□ 1.42
RAPGEF3-207ENST00000473777 BRINP3Q76B58 766 aa23.95■■□□□ 1.42
RAPGEF3-207ENST00000473777 SETD5Q9C0A6 1442 aa23.94■■□□□ 1.42
RAPGEF3-207ENST00000473777 SPATA31A6Q5VVP1 1343 aa23.93■■□□□ 1.42
RAPGEF3-207ENST00000473777 RGS17Q9UGC6 210 aaPredicted RBP23.93■■□□□ 1.42
RAPGEF3-207ENST00000473777 MEX3CQ5U5Q3 659 aaKnown RBP23.91■■□□□ 1.42
RAPGEF3-207ENST00000473777 MST1RQ04912 1400 aa23.91■■□□□ 1.42
RAPGEF3-207ENST00000473777 PTCH1Q13635 1447 aa23.91■■□□□ 1.42
RAPGEF3-207ENST00000473777 SETD1AO15047 1707 aaKnown RBP23.9■■□□□ 1.42
RAPGEF3-207ENST00000473777 NALCNQ8IZF0 1738 aa23.9■■□□□ 1.42
RAPGEF3-207ENST00000473777 ANKRD30BQ9BXX2 1392 aa23.9■■□□□ 1.42
RAPGEF3-207ENST00000473777 ASXL1Q8IXJ9 1541 aa23.89■■□□□ 1.41
RAPGEF3-207ENST00000473777 SHPRHQ149N8 1683 aa23.86■■□□□ 1.41
RAPGEF3-207ENST00000473777 ROBO2Q9HCK4 1378 aa23.86■■□□□ 1.41
RAPGEF3-207ENST00000473777 ADGRF5Q8IZF2 1346 aa23.85■■□□□ 1.41
RAPGEF3-207ENST00000473777 SPATA31E1Q6ZUB1 1445 aa23.85■■□□□ 1.41
RAPGEF3-207ENST00000473777 POTEAQ6S8J7 498 aa23.85■■□□□ 1.41
RAPGEF3-207ENST00000473777 LRRC59Q96AG4 307 aaKnown RBP23.85■■□□□ 1.41
RAPGEF3-207ENST00000473777 PRAG1Q86YV5 1406 aa23.84■■□□□ 1.41
RAPGEF3-207ENST00000473777 RAB3GAP2Q9H2M9 1393 aa23.82■■□□□ 1.4
RAPGEF3-207ENST00000473777 NHSL1Q5SYE7 1610 aa23.82■■□□□ 1.4
RAPGEF3-207ENST00000473777 IFT172Q9UG01 1749 aa23.81■■□□□ 1.4
RAPGEF3-207ENST00000473777 NUTM2BA6NNL0 878 aaPredicted RBP23.81■■□□□ 1.4
RAPGEF3-207ENST00000473777 NUTM2EB1AL46 878 aaPredicted RBP23.81■■□□□ 1.4
RAPGEF3-207ENST00000473777 NUTM2AQ8IVF1 878 aaPredicted RBP23.81■■□□□ 1.4
RAPGEF3-207ENST00000473777 C1orf167Q5SNV9 1468 aa23.81■■□□□ 1.4
RAPGEF3-207ENST00000473777 ZNF772Q68DY9 489 aaPredicted RBP23.8■■□□□ 1.4
RAPGEF3-207ENST00000473777 STK26Q9P289 416 aa23.8■■□□□ 1.4
RAPGEF3-207ENST00000473777 LRP6O75581 1613 aa23.78■■□□□ 1.4
RAPGEF3-207ENST00000473777 DDX17Q92841 729 aaKnown RBP23.76■■□□□ 1.39
RAPGEF3-207ENST00000473777 LRPPRCP42704 1394 aaKnown RBP23.76■■□□□ 1.39
RAPGEF3-207ENST00000473777 TMEM132EQ6IEE7 984 aa23.75■■□□□ 1.39
RAPGEF3-207ENST00000473777 ORAI2Q96SN7 254 aa23.75■■□□□ 1.39
RAPGEF3-207ENST00000473777 PIK3C2GO75747 1445 aa23.75■■□□□ 1.39
RAPGEF3-207ENST00000473777 ABCC11Q96J66 1382 aa23.73■■□□□ 1.39
RAPGEF3-207ENST00000473777 TECPR2O15040 1411 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms