RNA–Protein interactions for RNA: ENST00000473689.5

IMP4-213, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 5

Gene IMP4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-213ENST00000473689 RIMS2Q9UQ26 1411 aa31.45■■■□□ 2.63
IMP4-213ENST00000473689 PLEKHG1Q9ULL1 1385 aa31.44■■■□□ 2.62
IMP4-213ENST00000473689 TMEM131LA2VDJ0 1609 aa31.44■■■□□ 2.62
IMP4-213ENST00000473689 E9PCH4 1651 aa31.44■■■□□ 2.62
IMP4-213ENST00000473689 TMEM94Q12767 1356 aa31.43■■■□□ 2.62
IMP4-213ENST00000473689 CHGAP10645 457 aaKnown RBP31.42■■■□□ 2.62
IMP4-213ENST00000473689 BCANQ96GW7 911 aa31.42■■■□□ 2.62
IMP4-213ENST00000473689 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.41■■■□□ 2.62
IMP4-213ENST00000473689 PROSER2Q86WR7 435 aaPredicted RBP31.4■■■□□ 2.62
IMP4-213ENST00000473689 PPP1R15AO75807 674 aaPredicted RBP31.39■■■□□ 2.62
IMP4-213ENST00000473689 TBX22Q9Y458 520 aa31.38■■■□□ 2.61
IMP4-213ENST00000473689 SENP3Q9H4L4 574 aaPredicted RBP31.37■■■□□ 2.61
IMP4-213ENST00000473689 RBM33Q96EV2 1170 aaKnown RBP31.35■■■□□ 2.61
IMP4-213ENST00000473689 XIRP1Q702N8 1843 aaKnown RBP31.34■■■□□ 2.61
IMP4-213ENST00000473689 NAIPQ13075 1403 aa31.33■■■□□ 2.61
IMP4-213ENST00000473689 SOCS7O14512 581 aa31.33■■■□□ 2.61
IMP4-213ENST00000473689 NUTM2DQ5VT03 806 aaPredicted RBP31.33■■■□□ 2.61
IMP4-213ENST00000473689 NKTRP30414 1462 aaKnown RBP31.33■■■□□ 2.61
IMP4-213ENST00000473689 NWD1Q149M9 1564 aa31.32■■■□□ 2.6
IMP4-213ENST00000473689 FAM135BQ49AJ0 1406 aa31.31■■■□□ 2.6
IMP4-213ENST00000473689 MYO5BQ9ULV0 1848 aa31.3■■■□□ 2.6
IMP4-213ENST00000473689 ADAMTS13Q76LX8 1427 aa31.3■■■□□ 2.6
IMP4-213ENST00000473689 MED1Q15648 1581 aaPredicted RBP31.25■■■□□ 2.59
IMP4-213ENST00000473689 PIK3R4Q99570 1358 aa31.22■■■□□ 2.59
IMP4-213ENST00000473689 HFM1A2PYH4 1435 aa31.21■■■□□ 2.59
IMP4-213ENST00000473689 MSH6P52701 1360 aa31.2■■■□□ 2.59
IMP4-213ENST00000473689 NCOA3Q9Y6Q9 1424 aa31.19■■■□□ 2.58
IMP4-213ENST00000473689 CHD2O14647 1828 aaKnown RBP31.19■■■□□ 2.58
IMP4-213ENST00000473689 SLAIN2Q9P270 581 aa31.17■■■□□ 2.58
IMP4-213ENST00000473689 DIP2AQ14689 1571 aa31.16■■■□□ 2.58
IMP4-213ENST00000473689 ZNF326Q5BKZ1 582 aaKnown RBP31.14■■■□□ 2.58
IMP4-213ENST00000473689 TRIM52Q96A61 297 aa31.14■■■□□ 2.58
IMP4-213ENST00000473689 AMOTL2Q9Y2J4 779 aa31.14■■■□□ 2.58
IMP4-213ENST00000473689 SPHKAPQ2M3C7 1700 aa31.14■■■□□ 2.58
IMP4-213ENST00000473689 PTPRUQ92729 1446 aa31.12■■■□□ 2.57
IMP4-213ENST00000473689 TRPM2O94759 1503 aa31.1■■■□□ 2.57
IMP4-213ENST00000473689 C19orf44Q9H6X5 657 aa31.09■■■□□ 2.57
IMP4-213ENST00000473689 PHF23Q9BUL5 403 aaPredicted RBP31.08■■■□□ 2.57
IMP4-213ENST00000473689 SLC4A1APQ9BWU0 796 aaKnown RBP31.08■■■□□ 2.57
IMP4-213ENST00000473689 CLTCL1P53675 1640 aa31.06■■■□□ 2.56
IMP4-213ENST00000473689 SETBP1Q9Y6X0 1596 aa31.06■■■□□ 2.56
IMP4-213ENST00000473689 ROBO1Q9Y6N7 1651 aa31.06■■■□□ 2.56
IMP4-213ENST00000473689 C14orf37Q86TY3 774 aa31.05■■■□□ 2.56
IMP4-213ENST00000473689 METP08581 1390 aa31.04■■■□□ 2.56
IMP4-213ENST00000473689 NRXN3Q9Y4C0 1643 aa31.03■■■□□ 2.56
IMP4-213ENST00000473689 CADPS2Q86UW7 1296 aa31.03■■■□□ 2.56
IMP4-213ENST00000473689 NEXMIFQ5QGS0 1516 aa31.01■■■□□ 2.55
IMP4-213ENST00000473689 RGS17Q9UGC6 210 aaPredicted RBP31■■■□□ 2.55
IMP4-213ENST00000473689 ATF3P18847 181 aa30.99■■■□□ 2.55
IMP4-213ENST00000473689 VGFO15240 615 aaPredicted RBP30.97■■■□□ 2.55
IMP4-213ENST00000473689 RPGRIP1LQ68CZ1 1315 aa30.96■■■□□ 2.55
IMP4-213ENST00000473689 FOXD1Q16676 465 aa30.94■■■□□ 2.54
IMP4-213ENST00000473689 XRN1Q8IZH2 1706 aaKnown RBP30.93■■■□□ 2.54
IMP4-213ENST00000473689 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.92■■■□□ 2.54
IMP4-213ENST00000473689 DCCP43146 1447 aa30.9■■■□□ 2.54
IMP4-213ENST00000473689 MPHOSPH9Q99550 1183 aa30.9■■■□□ 2.54
IMP4-213ENST00000473689 JCADQ9P266 1359 aa30.9■■■□□ 2.54
IMP4-213ENST00000473689 KIF1BO60333 1816 aa30.87■■■□□ 2.53
IMP4-213ENST00000473689 BRINP3Q76B58 766 aa30.87■■■□□ 2.53
IMP4-213ENST00000473689 PHLPP1O60346 1717 aa30.84■■■□□ 2.53
IMP4-213ENST00000473689 COL16A1Q07092 1604 aaPredicted RBP30.82■■■□□ 2.52
IMP4-213ENST00000473689 MST1RQ04912 1400 aa30.81■■■□□ 2.52
IMP4-213ENST00000473689 ADGRL3Q9HAR2 1447 aa30.81■■■□□ 2.52
IMP4-213ENST00000473689 AHDC1Q5TGY3 1603 aaPredicted RBP30.8■■■□□ 2.52
IMP4-213ENST00000473689 ACIN1Q9UKV3 1341 aaKnown RBP30.79■■■□□ 2.52
IMP4-213ENST00000473689 POTEAQ6S8J7 498 aa30.79■■■□□ 2.52
IMP4-213ENST00000473689 CCDC144AA2RUR9 1427 aa30.79■■■□□ 2.52
IMP4-213ENST00000473689 SPATA31E1Q6ZUB1 1445 aa30.77■■■□□ 2.52
IMP4-213ENST00000473689 ROBO2Q9HCK4 1378 aa30.77■■■□□ 2.52
IMP4-213ENST00000473689 SPATA31A6Q5VVP1 1343 aa30.76■■■□□ 2.52
IMP4-213ENST00000473689 PTCH1Q13635 1447 aa30.76■■■□□ 2.51
IMP4-213ENST00000473689 PRAG1Q86YV5 1406 aa30.76■■■□□ 2.51
IMP4-213ENST00000473689 ADGRF5Q8IZF2 1346 aa30.75■■■□□ 2.51
IMP4-213ENST00000473689 SETD5Q9C0A6 1442 aa30.75■■■□□ 2.51
IMP4-213ENST00000473689 RGL3Q3MIN7 710 aa30.75■■■□□ 2.51
IMP4-213ENST00000473689 SETD1AO15047 1707 aaKnown RBP30.72■■■□□ 2.51
IMP4-213ENST00000473689 ASXL1Q8IXJ9 1541 aa30.72■■■□□ 2.51
IMP4-213ENST00000473689 PPLO60437 1756 aa30.7■■■□□ 2.51
IMP4-213ENST00000473689 ANKRD30BQ9BXX2 1392 aa30.69■■■□□ 2.5
IMP4-213ENST00000473689 LRP6O75581 1613 aa30.68■■■□□ 2.5
IMP4-213ENST00000473689 C1orf167Q5SNV9 1468 aa30.65■■■□□ 2.5
IMP4-213ENST00000473689 DDX17Q92841 729 aaKnown RBP30.65■■■□□ 2.5
IMP4-213ENST00000473689 LRRC59Q96AG4 307 aaKnown RBP30.65■■■□□ 2.5
IMP4-213ENST00000473689 NALCNQ8IZF0 1738 aa30.64■■■□□ 2.5
IMP4-213ENST00000473689 RAB3GAP2Q9H2M9 1393 aa30.63■■■□□ 2.49
IMP4-213ENST00000473689 SHPRHQ149N8 1683 aa30.61■■■□□ 2.49
IMP4-213ENST00000473689 ORAI2Q96SN7 254 aa30.6■■■□□ 2.49
IMP4-213ENST00000473689 MEX3CQ5U5Q3 659 aaKnown RBP30.59■■■□□ 2.49
IMP4-213ENST00000473689 PIK3C2GO75747 1445 aa30.58■■■□□ 2.49
IMP4-213ENST00000473689 LRPPRCP42704 1394 aaKnown RBP30.58■■■□□ 2.49
IMP4-213ENST00000473689 NHSL1Q5SYE7 1610 aa30.58■■■□□ 2.49
IMP4-213ENST00000473689 ABCC11Q96J66 1382 aa30.57■■■□□ 2.48
IMP4-213ENST00000473689 TMEM132EQ6IEE7 984 aa30.57■■■□□ 2.48
IMP4-213ENST00000473689 STK26Q9P289 416 aa30.57■■■□□ 2.48
IMP4-213ENST00000473689 TECPR2O15040 1411 aa30.56■■■□□ 2.48
IMP4-213ENST00000473689 NUTM2BA6NNL0 878 aaPredicted RBP30.56■■■□□ 2.48
IMP4-213ENST00000473689 NUTM2EB1AL46 878 aaPredicted RBP30.56■■■□□ 2.48
IMP4-213ENST00000473689 NUTM2AQ8IVF1 878 aaPredicted RBP30.56■■■□□ 2.48
IMP4-213ENST00000473689 ZNF772Q68DY9 489 aaPredicted RBP30.55■■■□□ 2.48
IMP4-213ENST00000473689 WAPLQ7Z5K2 1190 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms