RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 ZFYVE9O95405 1425 aa13.35□□□□□ -0.27
SMG5-203ENST00000473643 E9PCH4 1651 aa13.34□□□□□ -0.27
SMG5-203ENST00000473643 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMG5-203ENST00000473643 SLC26A8Q96RN1 970 aa13.34□□□□□ -0.27
SMG5-203ENST00000473643 CLSPNQ9HAW4 1339 aa13.34□□□□□ -0.27
SMG5-203ENST00000473643 TOM1O60784 492 aa13.33□□□□□ -0.28
SMG5-203ENST00000473643 CHGAP10645 457 aaKnown RBP13.33□□□□□ -0.28
SMG5-203ENST00000473643 KCNA6P17658 529 aa13.33□□□□□ -0.28
SMG5-203ENST00000473643 LRRC7Q96NW7 1537 aa13.33□□□□□ -0.28
SMG5-203ENST00000473643 RIMS2Q9UQ26 1411 aa13.32□□□□□ -0.28
SMG5-203ENST00000473643 PLEKHG1Q9ULL1 1385 aa13.32□□□□□ -0.28
SMG5-203ENST00000473643 TMEM131LA2VDJ0 1609 aa13.31□□□□□ -0.28
SMG5-203ENST00000473643 TBX22Q9Y458 520 aa13.31□□□□□ -0.28
SMG5-203ENST00000473643 ANKRD30BQ9BXX2 1392 aa13.31□□□□□ -0.28
SMG5-203ENST00000473643 PPP1R15AO75807 674 aaPredicted RBP13.3□□□□□ -0.28
SMG5-203ENST00000473643 FOXD1Q16676 465 aa13.3□□□□□ -0.28
SMG5-203ENST00000473643 CCER1Q8TC90 406 aaPredicted RBP13.3□□□□□ -0.28
SMG5-203ENST00000473643 BCANQ96GW7 911 aa13.3□□□□□ -0.28
SMG5-203ENST00000473643 STRCP1A6NGW2 1772 aa13.28□□□□□ -0.28
SMG5-203ENST00000473643 NUTM2DQ5VT03 806 aaPredicted RBP13.28□□□□□ -0.28
SMG5-203ENST00000473643 PIP4K2BP78356 416 aa13.27□□□□□ -0.29
SMG5-203ENST00000473643 PROSER2Q86WR7 435 aaPredicted RBP13.26□□□□□ -0.29
SMG5-203ENST00000473643 SENP3Q9H4L4 574 aaPredicted RBP13.26□□□□□ -0.29
SMG5-203ENST00000473643 ADAMTS13Q76LX8 1427 aa13.25□□□□□ -0.29
SMG5-203ENST00000473643 TMEM94Q12767 1356 aa13.25□□□□□ -0.29
SMG5-203ENST00000473643 ALKQ9UM73 1620 aa13.24□□□□□ -0.29
SMG5-203ENST00000473643 HSPA1LP34931 641 aa13.24□□□□□ -0.29
SMG5-203ENST00000473643 ZNF326Q5BKZ1 582 aaKnown RBP13.24□□□□□ -0.29
SMG5-203ENST00000473643 TRPM2O94759 1503 aa13.23□□□□□ -0.29
SMG5-203ENST00000473643 PIK3R4Q99570 1358 aa13.23□□□□□ -0.29
SMG5-203ENST00000473643 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
SMG5-203ENST00000473643 RBM33Q96EV2 1170 aaKnown RBP13.23□□□□□ -0.29
SMG5-203ENST00000473643 MYO5BQ9ULV0 1848 aa13.23□□□□□ -0.29
SMG5-203ENST00000473643 SIN3AQ96ST3 1273 aa13.22□□□□□ -0.29
SMG5-203ENST00000473643 SPHKAPQ2M3C7 1700 aa13.22□□□□□ -0.29
SMG5-203ENST00000473643 CCDC144AA2RUR9 1427 aa13.22□□□□□ -0.29
SMG5-203ENST00000473643 NKTRP30414 1462 aaKnown RBP13.21□□□□□ -0.3
SMG5-203ENST00000473643 RPGRIP1LQ68CZ1 1315 aa13.2□□□□□ -0.3
SMG5-203ENST00000473643 TIMELESSQ9UNS1 1208 aa13.2□□□□□ -0.3
SMG5-203ENST00000473643 AMOTL2Q9Y2J4 779 aa13.2□□□□□ -0.3
SMG5-203ENST00000473643 NWD1Q149M9 1564 aa13.2□□□□□ -0.3
SMG5-203ENST00000473643 VGFO15240 615 aaPredicted RBP13.19□□□□□ -0.3
SMG5-203ENST00000473643 CLTCL1P53675 1640 aa13.19□□□□□ -0.3
SMG5-203ENST00000473643 NCOA3Q9Y6Q9 1424 aa13.19□□□□□ -0.3
SMG5-203ENST00000473643 ILDR2Q71H61 639 aa13.18□□□□□ -0.3
SMG5-203ENST00000473643 FAM135BQ49AJ0 1406 aa13.17□□□□□ -0.3
SMG5-203ENST00000473643 DIP2AQ14689 1571 aa13.16□□□□□ -0.3
SMG5-203ENST00000473643 SPATA31E1Q6ZUB1 1445 aa13.16□□□□□ -0.3
SMG5-203ENST00000473643 PTPRUQ92729 1446 aa13.16□□□□□ -0.3
SMG5-203ENST00000473643 NEUROD1Q13562 356 aa13.16□□□□□ -0.3
SMG5-203ENST00000473643 C19orf44Q9H6X5 657 aa13.16□□□□□ -0.3
SMG5-203ENST00000473643 SLAIN2Q9P270 581 aa13.16□□□□□ -0.3
SMG5-203ENST00000473643 NEXMIFQ5QGS0 1516 aa13.16□□□□□ -0.3
SMG5-203ENST00000473643 METP08581 1390 aa13.16□□□□□ -0.3
SMG5-203ENST00000473643 MSH6P52701 1360 aa13.16□□□□□ -0.3
SMG5-203ENST00000473643 CHD2O14647 1828 aaKnown RBP13.16□□□□□ -0.3
SMG5-203ENST00000473643 XIRP1Q702N8 1843 aaKnown RBP13.16□□□□□ -0.3
SMG5-203ENST00000473643 SETBP1Q9Y6X0 1596 aa13.15□□□□□ -0.3
SMG5-203ENST00000473643 DISP3Q9P2K9 1392 aa13.15□□□□□ -0.3
SMG5-203ENST00000473643 NRXN3Q9Y4C0 1643 aa13.13□□□□□ -0.31
SMG5-203ENST00000473643 RGL3Q3MIN7 710 aa13.12□□□□□ -0.31
SMG5-203ENST00000473643 CADPS2Q86UW7 1296 aa13.12□□□□□ -0.31
SMG5-203ENST00000473643 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
SMG5-203ENST00000473643 ZEB1P37275 1124 aaPredicted RBP13.11□□□□□ -0.31
SMG5-203ENST00000473643 C14orf37Q86TY3 774 aa13.11□□□□□ -0.31
SMG5-203ENST00000473643 L3MBTL2Q969R5 705 aa13.11□□□□□ -0.31
SMG5-203ENST00000473643 KIF1BO60333 1816 aa13.11□□□□□ -0.31
SMG5-203ENST00000473643 TONSLQ96HA7 1378 aa13.1□□□□□ -0.31
SMG5-203ENST00000473643 ATF3P18847 181 aa13.1□□□□□ -0.31
SMG5-203ENST00000473643 ADGRF5Q8IZF2 1346 aa13.1□□□□□ -0.31
SMG5-203ENST00000473643 XRN1Q8IZH2 1706 aaKnown RBP13.06□□□□□ -0.32
SMG5-203ENST00000473643 SOCS7O14512 581 aa13.06□□□□□ -0.32
SMG5-203ENST00000473643 DCAF11Q8TEB1 546 aa13.06□□□□□ -0.32
SMG5-203ENST00000473643 ROBO2Q9HCK4 1378 aa13.06□□□□□ -0.32
SMG5-203ENST00000473643 PRAG1Q86YV5 1406 aa13.05□□□□□ -0.32
SMG5-203ENST00000473643 DCCP43146 1447 aa13.05□□□□□ -0.32
SMG5-203ENST00000473643 C14orf93Q9H972 538 aaKnown RBP13.04□□□□□ -0.32
SMG5-203ENST00000473643 PTCH1Q13635 1447 aa13.04□□□□□ -0.32
SMG5-203ENST00000473643 ROBO1Q9Y6N7 1651 aa13.03□□□□□ -0.32
SMG5-203ENST00000473643 BRINP3Q76B58 766 aa13.03□□□□□ -0.32
SMG5-203ENST00000473643 MYOM2P54296 1465 aa13.03□□□□□ -0.32
SMG5-203ENST00000473643 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.02□□□□□ -0.32
SMG5-203ENST00000473643 PPLO60437 1756 aa13.02□□□□□ -0.32
SMG5-203ENST00000473643 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
SMG5-203ENST00000473643 PIK3C2GO75747 1445 aa13.02□□□□□ -0.33
SMG5-203ENST00000473643 ADGRL3Q9HAR2 1447 aa13.02□□□□□ -0.33
SMG5-203ENST00000473643 NRXN1Q9ULB1 1477 aa13.02□□□□□ -0.33
SMG5-203ENST00000473643 TMEM132EQ6IEE7 984 aa13.01□□□□□ -0.33
SMG5-203ENST00000473643 ABCC11Q96J66 1382 aa13.01□□□□□ -0.33
SMG5-203ENST00000473643 SETD1AO15047 1707 aaKnown RBP13□□□□□ -0.33
SMG5-203ENST00000473643 MED1Q15648 1581 aaPredicted RBP13□□□□□ -0.33
SMG5-203ENST00000473643 MST1RQ04912 1400 aa13□□□□□ -0.33
SMG5-203ENST00000473643 LRPPRCP42704 1394 aaKnown RBP13□□□□□ -0.33
SMG5-203ENST00000473643 NBPF8Q3BBV2 869 aa13□□□□□ -0.33
SMG5-203ENST00000473643 SIRT1Q96EB6 747 aa13□□□□□ -0.33
SMG5-203ENST00000473643 CFAP70Q5T0N1 1121 aa12.99□□□□□ -0.33
SMG5-203ENST00000473643 STK26Q9P289 416 aa12.99□□□□□ -0.33
SMG5-203ENST00000473643 TECPR2O15040 1411 aa12.98□□□□□ -0.33
SMG5-203ENST00000473643 JCADQ9P266 1359 aa12.98□□□□□ -0.33
SMG5-203ENST00000473643 WAPLQ7Z5K2 1190 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms