RNA–Protein interactions for RNA: ENST00000473578.5

CAMTA1-208, Transcript of calmodulin binding transcription activator 1, human

TSL 1 (best) BASIC

Gene CAMTA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAMTA1-208	ENST00000473578	LRRC7	Q96NW7	1537 aa		33.44	■■■□□ 2.94
CAMTA1-208	ENST00000473578	STRCP1	A6NGW2	1772 aa		33.43	■■■□□ 2.94
CAMTA1-208	ENST00000473578	RIMS2	Q9UQ26	1411 aa		33.42	■■■□□ 2.94
CAMTA1-208	ENST00000473578	TMEM131L	A2VDJ0	1609 aa		33.4	■■■□□ 2.94
CAMTA1-208	ENST00000473578	ZFYVE9	O95405	1425 aa		33.39	■■■□□ 2.94
CAMTA1-208	ENST00000473578	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.39	■■■□□ 2.94
CAMTA1-208	ENST00000473578	TRIM52	Q96A61	297 aa		33.39	■■■□□ 2.94
CAMTA1-208	ENST00000473578	HFM1	A2PYH4	1435 aa		33.38	■■■□□ 2.93
CAMTA1-208	ENST00000473578	KCNA6	P17658	529 aa		33.36	■■■□□ 2.93
CAMTA1-208	ENST00000473578	MYO5B	Q9ULV0	1848 aa		33.35	■■■□□ 2.93
CAMTA1-208	ENST00000473578	PLEKHG1	Q9ULL1	1385 aa		33.34	■■■□□ 2.93
CAMTA1-208	ENST00000473578	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.34	■■■□□ 2.93
CAMTA1-208	ENST00000473578	PROSER2	Q86WR7	435 aa	Predicted RBP	33.28	■■■□□ 2.92
CAMTA1-208	ENST00000473578	HSPA1L	P34931	641 aa		33.27	■■■□□ 2.92
CAMTA1-208	ENST00000473578	SPHKAP	Q2M3C7	1700 aa		33.26	■■■□□ 2.92
CAMTA1-208	ENST00000473578	ZNF326	Q5BKZ1	582 aa	Known RBP	33.25	■■■□□ 2.91
CAMTA1-208	ENST00000473578	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.25	■■■□□ 2.91
CAMTA1-208	ENST00000473578	TMEM94	Q12767	1356 aa		33.24	■■■□□ 2.91
CAMTA1-208	ENST00000473578	DISP3	Q9P2K9	1392 aa		33.24	■■■□□ 2.91
CAMTA1-208	ENST00000473578	TBX22	Q9Y458	520 aa		33.24	■■■□□ 2.91
CAMTA1-208	ENST00000473578	ALK	Q9UM73	1620 aa		33.22	■■■□□ 2.91
CAMTA1-208	ENST00000473578	RBM33	Q96EV2	1170 aa	Known RBP	33.22	■■■□□ 2.91
CAMTA1-208	ENST00000473578	NKTR	P30414	1462 aa	Known RBP	33.18	■■■□□ 2.9
CAMTA1-208	ENST00000473578	TRPM2	O94759	1503 aa		33.17	■■■□□ 2.9
CAMTA1-208	ENST00000473578	NWD1	Q149M9	1564 aa		33.16	■■■□□ 2.9
CAMTA1-208	ENST00000473578	ADAMTS13	Q76LX8	1427 aa		33.15	■■■□□ 2.9
CAMTA1-208	ENST00000473578	XIRP1	Q702N8	1843 aa	Known RBP	33.14	■■■□□ 2.9
CAMTA1-208	ENST00000473578	CLTCL1	P53675	1640 aa		33.13	■■■□□ 2.89
CAMTA1-208	ENST00000473578	DIP2A	Q14689	1571 aa		33.09	■■■□□ 2.89
CAMTA1-208	ENST00000473578	PIK3R4	Q99570	1358 aa		33.09	■■■□□ 2.89
CAMTA1-208	ENST00000473578	MSH6	P52701	1360 aa		33.08	■■■□□ 2.89
CAMTA1-208	ENST00000473578	CHD2	O14647	1828 aa	Known RBP	33.07	■■■□□ 2.89
CAMTA1-208	ENST00000473578	C14orf37	Q86TY3	774 aa		33.04	■■■□□ 2.88
CAMTA1-208	ENST00000473578	AMOTL2	Q9Y2J4	779 aa		33.04	■■■□□ 2.88
CAMTA1-208	ENST00000473578	MPHOSPH9	Q99550	1183 aa		33.03	■■■□□ 2.88
CAMTA1-208	ENST00000473578	KIF1B	O60333	1816 aa		33.01	■■■□□ 2.87
CAMTA1-208	ENST00000473578	FAM135B	Q49AJ0	1406 aa		33	■■■□□ 2.87
CAMTA1-208	ENST00000473578	NEXMIF	Q5QGS0	1516 aa		32.99	■■■□□ 2.87
CAMTA1-208	ENST00000473578	SETD5	Q9C0A6	1442 aa		32.99	■■■□□ 2.87
CAMTA1-208	ENST00000473578	SETBP1	Q9Y6X0	1596 aa		32.99	■■■□□ 2.87
CAMTA1-208	ENST00000473578	ACIN1	Q9UKV3	1341 aa	Known RBP	32.99	■■■□□ 2.87
CAMTA1-208	ENST00000473578	VGF	O15240	615 aa	Predicted RBP	32.97	■■■□□ 2.87
CAMTA1-208	ENST00000473578	PTPRU	Q92729	1446 aa		32.96	■■■□□ 2.87
CAMTA1-208	ENST00000473578	NCOA3	Q9Y6Q9	1424 aa		32.96	■■■□□ 2.87
CAMTA1-208	ENST00000473578	SLAIN2	Q9P270	581 aa		32.95	■■■□□ 2.87
CAMTA1-208	ENST00000473578	RPGRIP1L	Q68CZ1	1315 aa		32.95	■■■□□ 2.86
CAMTA1-208	ENST00000473578	NRXN3	Q9Y4C0	1643 aa		32.95	■■■□□ 2.86
CAMTA1-208	ENST00000473578	ILDR2	Q71H61	639 aa		32.94	■■■□□ 2.86
CAMTA1-208	ENST00000473578	MET	P08581	1390 aa		32.93	■■■□□ 2.86
CAMTA1-208	ENST00000473578	CCDC144A	A2RUR9	1427 aa		32.93	■■■□□ 2.86
CAMTA1-208	ENST00000473578	C19orf44	Q9H6X5	657 aa		32.91	■■■□□ 2.86
CAMTA1-208	ENST00000473578	ATF3	P18847	181 aa		32.89	■■■□□ 2.86
CAMTA1-208	ENST00000473578	CADPS2	Q86UW7	1296 aa		32.88	■■■□□ 2.85
CAMTA1-208	ENST00000473578	MED1	Q15648	1581 aa	Predicted RBP	32.87	■■■□□ 2.85
CAMTA1-208	ENST00000473578	RAB3GAP2	Q9H2M9	1393 aa		32.86	■■■□□ 2.85
CAMTA1-208	ENST00000473578	ROBO1	Q9Y6N7	1651 aa		32.86	■■■□□ 2.85
CAMTA1-208	ENST00000473578	RGL3	Q3MIN7	710 aa		32.86	■■■□□ 2.85
CAMTA1-208	ENST00000473578	XRN1	Q8IZH2	1706 aa	Known RBP	32.82	■■■□□ 2.84
CAMTA1-208	ENST00000473578	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.78	■■■□□ 2.84
CAMTA1-208	ENST00000473578	SPATA31E1	Q6ZUB1	1445 aa		32.77	■■■□□ 2.84
CAMTA1-208	ENST00000473578	PPL	O60437	1756 aa		32.75	■■■□□ 2.83
CAMTA1-208	ENST00000473578	ADGRF5	Q8IZF2	1346 aa		32.74	■■■□□ 2.83
CAMTA1-208	ENST00000473578	ANKRD30B	Q9BXX2	1392 aa		32.72	■■■□□ 2.83
CAMTA1-208	ENST00000473578	DCC	P43146	1447 aa		32.72	■■■□□ 2.83
CAMTA1-208	ENST00000473578	ADGRL3	Q9HAR2	1447 aa		32.68	■■■□□ 2.82
CAMTA1-208	ENST00000473578	PHLPP1	O60346	1717 aa		32.66	■■■□□ 2.82
CAMTA1-208	ENST00000473578	SOCS7	O14512	581 aa		32.66	■■■□□ 2.82
CAMTA1-208	ENST00000473578	ROBO2	Q9HCK4	1378 aa		32.66	■■■□□ 2.82
CAMTA1-208	ENST00000473578	PTCH1	Q13635	1447 aa		32.66	■■■□□ 2.82
CAMTA1-208	ENST00000473578	SETD1A	O15047	1707 aa	Known RBP	32.65	■■■□□ 2.82
CAMTA1-208	ENST00000473578	HRC	P23327	699 aa		32.65	■■■□□ 2.82
CAMTA1-208	ENST00000473578	BRINP3	Q76B58	766 aa		32.65	■■■□□ 2.82
CAMTA1-208	ENST00000473578	JCAD	Q9P266	1359 aa		32.62	■■■□□ 2.81
CAMTA1-208	ENST00000473578	MST1R	Q04912	1400 aa		32.61	■■■□□ 2.81
CAMTA1-208	ENST00000473578	STK26	Q9P289	416 aa		32.6	■■■□□ 2.81
CAMTA1-208	ENST00000473578	PRAG1	Q86YV5	1406 aa		32.58	■■■□□ 2.81
CAMTA1-208	ENST00000473578	IFT172	Q9UG01	1749 aa		32.57	■■■□□ 2.81
CAMTA1-208	ENST00000473578	NALCN	Q8IZF0	1738 aa		32.57	■■■□□ 2.8
CAMTA1-208	ENST00000473578	TMEM132E	Q6IEE7	984 aa		32.56	■■■□□ 2.8
CAMTA1-208	ENST00000473578	PIK3C2G	O75747	1445 aa		32.56	■■■□□ 2.8
CAMTA1-208	ENST00000473578	COL16A1	Q07092	1604 aa	Predicted RBP	32.55	■■■□□ 2.8
CAMTA1-208	ENST00000473578	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.55	■■■□□ 2.8
CAMTA1-208	ENST00000473578	ASXL1	Q8IXJ9	1541 aa		32.54	■■■□□ 2.8
CAMTA1-208	ENST00000473578	LRPPRC	P42704	1394 aa	Known RBP	32.52	■■■□□ 2.8
CAMTA1-208	ENST00000473578	RGS17	Q9UGC6	210 aa	Predicted RBP	32.5	■■■□□ 2.79
CAMTA1-208	ENST00000473578	C14orf93	Q9H972	538 aa	Known RBP	32.49	■■■□□ 2.79
CAMTA1-208	ENST00000473578	C1orf167	Q5SNV9	1468 aa		32.48	■■■□□ 2.79
CAMTA1-208	ENST00000473578	WAPL	Q7Z5K2	1190 aa		32.48	■■■□□ 2.79
CAMTA1-208	ENST00000473578	SPATA31A6	Q5VVP1	1343 aa		32.48	■■■□□ 2.79
CAMTA1-208	ENST00000473578	MYOM2	P54296	1465 aa		32.48	■■■□□ 2.79
CAMTA1-208	ENST00000473578	ABCC11	Q96J66	1382 aa		32.47	■■■□□ 2.79
CAMTA1-208	ENST00000473578	CFAP70	Q5T0N1	1121 aa		32.47	■■■□□ 2.79
CAMTA1-208	ENST00000473578	DDX17	Q92841	729 aa	Known RBP	32.46	■■■□□ 2.79
CAMTA1-208	ENST00000473578	TECPR2	O15040	1411 aa		32.45	■■■□□ 2.79
CAMTA1-208	ENST00000473578	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.44	■■■□□ 2.78
CAMTA1-208	ENST00000473578	NRXN1	Q9ULB1	1477 aa		32.44	■■■□□ 2.78
CAMTA1-208	ENST00000473578	LRRC59	Q96AG4	307 aa	Known RBP	32.43	■■■□□ 2.78
CAMTA1-208	ENST00000473578	ORAI2	Q96SN7	254 aa		32.43	■■■□□ 2.78
CAMTA1-208	ENST00000473578	MEX3C	Q5U5Q3	659 aa	Known RBP	32.42	■■■□□ 2.78
CAMTA1-208	ENST00000473578	KDM2A	Q9Y2K7	1162 aa		32.42	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms