RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 PXYLP1Q8TE99 480 aa14.22□□□□□ -0.13
A1CF-209ENST00000473480 MINK1Q8N4C8 1332 aaPredicted RBP14.21□□□□□ -0.13
A1CF-209ENST00000473480 DNAJB2P25686 324 aa14.21□□□□□ -0.13
A1CF-209ENST00000473480 BCAMP50895 628 aa14.21□□□□□ -0.13
A1CF-209ENST00000473480 METTL3Q86U44 580 aaKnown RBP14.21□□□□□ -0.13
A1CF-209ENST00000473480 ZMYND10O75800 440 aa14.2□□□□□ -0.14
A1CF-209ENST00000473480 THOC2Q8NI27 1593 aaKnown RBP14.2□□□□□ -0.14
A1CF-209ENST00000473480 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.19□□□□□ -0.14
A1CF-209ENST00000473480 RCCD1A6NED2 376 aa14.19□□□□□ -0.14
A1CF-209ENST00000473480 PTPN5P54829 565 aa14.19□□□□□ -0.14
A1CF-209ENST00000473480 IRF6O14896 467 aa14.18□□□□□ -0.14
A1CF-209ENST00000473480 BARGINQ6ZT62 677 aa14.18□□□□□ -0.14
A1CF-209ENST00000473480 SLC4A3P48751 1232 aa14.16□□□□□ -0.14
A1CF-209ENST00000473480 SWT1Q5T5J6 900 aaKnown RBP14.16□□□□□ -0.14
A1CF-209ENST00000473480 KRI1Q8N9T8 703 aaKnown RBP14.16□□□□□ -0.14
A1CF-209ENST00000473480 TMEM134Q9H6X4 195 aa14.16□□□□□ -0.14
A1CF-209ENST00000473480 NESP48681 1621 aa14.15□□□□□ -0.14
A1CF-209ENST00000473480 TSR3Q9UJK0 312 aaKnown RBP14.15□□□□□ -0.14
A1CF-209ENST00000473480 HPS5Q9UPZ3 1129 aa14.15□□□□□ -0.14
A1CF-209ENST00000473480 SLF2Q8IX21 1173 aa14.13□□□□□ -0.15
A1CF-209ENST00000473480 CCDC102AQ96A19 550 aa14.13□□□□□ -0.15
A1CF-209ENST00000473480 RNF40O75150 1001 aa14.12□□□□□ -0.15
A1CF-209ENST00000473480 PPP4CP60510 307 aa14.11□□□□□ -0.15
A1CF-209ENST00000473480 NYAP1Q6ZVC0 841 aa14.11□□□□□ -0.15
A1CF-209ENST00000473480 NECTIN2Q92692 538 aa14.11□□□□□ -0.15
A1CF-209ENST00000473480 WBP1LQ9NX94 342 aa14.11□□□□□ -0.15
A1CF-209ENST00000473480 PHOX2BQ99453 314 aa14.1□□□□□ -0.15
A1CF-209ENST00000473480 BAZ1AQ9NRL2 1556 aaPredicted RBP14.07□□□□□ -0.16
A1CF-209ENST00000473480 DAXXQ9UER7 740 aaPredicted RBP14.06□□□□□ -0.16
A1CF-209ENST00000473480 NCAPD3P42695 1498 aa14.06□□□□□ -0.16
A1CF-209ENST00000473480 DCAF1Q9Y4B6 1507 aa14.05□□□□□ -0.16
A1CF-209ENST00000473480 NLRP7Q8WX94 980 aa14.04□□□□□ -0.16
A1CF-209ENST00000473480 SMARCA2P51531 1590 aa14.03□□□□□ -0.16
A1CF-209ENST00000473480 RIMBP3CA6NJZ7 1639 aa14.03□□□□□ -0.16
A1CF-209ENST00000473480 RIMBP3BA6NNM3 1639 aa14.03□□□□□ -0.16
A1CF-209ENST00000473480 RIMBP3Q9UFD9 1639 aa14.03□□□□□ -0.16
A1CF-209ENST00000473480 RSPH4AQ5TD94 716 aa14.02□□□□□ -0.17
A1CF-209ENST00000473480 AK7Q96M32 723 aa14□□□□□ -0.17
A1CF-209ENST00000473480 MDM2Q00987 491 aaPredicted RBP13.99□□□□□ -0.17
A1CF-209ENST00000473480 SULF1Q8IWU6 871 aa13.99□□□□□ -0.17
A1CF-209ENST00000473480 PRR14Q9BWN1 585 aa13.98□□□□□ -0.17
A1CF-209ENST00000473480 CLCN1P35523 988 aa13.97□□□□□ -0.17
A1CF-209ENST00000473480 SLC24A3Q9HC58 644 aa13.97□□□□□ -0.17
A1CF-209ENST00000473480 DDX11L8A8MPP1 907 aa13.96□□□□□ -0.17
A1CF-209ENST00000473480 SLC10A3P09131 477 aa13.96□□□□□ -0.17
A1CF-209ENST00000473480 GPCPD1Q9NPB8 672 aa13.96□□□□□ -0.17
A1CF-209ENST00000473480 APLP1P51693 650 aa13.95□□□□□ -0.18
A1CF-209ENST00000473480 AMHR2Q16671 573 aa13.95□□□□□ -0.18
A1CF-209ENST00000473480 TRIM66O15016 1216 aa13.94□□□□□ -0.18
A1CF-209ENST00000473480 CFHP08603 1231 aa13.94□□□□□ -0.18
A1CF-209ENST00000473480 KMT5BQ4FZB7 885 aa13.94□□□□□ -0.18
A1CF-209ENST00000473480 RDH13Q8NBN7 331 aa13.94□□□□□ -0.18
A1CF-209ENST00000473480 KIF21AQ7Z4S6 1674 aa13.92□□□□□ -0.18
A1CF-209ENST00000473480 CYB5RLQ6IPT4 315 aa13.92□□□□□ -0.18
A1CF-209ENST00000473480 TTLL12Q14166 644 aaPredicted RBP13.91□□□□□ -0.18
A1CF-209ENST00000473480 TMUB1Q9BVT8 246 aa13.91□□□□□ -0.18
A1CF-209ENST00000473480 PLA2G2EQ9NZK7 142 aa13.91□□□□□ -0.18
A1CF-209ENST00000473480 LAMC3Q9Y6N6 1575 aa13.91□□□□□ -0.18
A1CF-209ENST00000473480 PDS5BQ9NTI5 1447 aa13.9□□□□□ -0.18
A1CF-209ENST00000473480 ZCCHC6Q5VYS8 1495 aaKnown RBP13.9□□□□□ -0.18
A1CF-209ENST00000473480 ARHGEF11O15085 1522 aa13.89□□□□□ -0.19
A1CF-209ENST00000473480 ACTN4O43707 911 aaKnown RBP13.88□□□□□ -0.19
A1CF-209ENST00000473480 ITGBL1O95965 494 aaPredicted RBP13.88□□□□□ -0.19
A1CF-209ENST00000473480 FAM217BQ9NTX9 383 aaPredicted RBP13.87□□□□□ -0.19
A1CF-209ENST00000473480 CD46P15529 392 aa13.86□□□□□ -0.19
A1CF-209ENST00000473480 REPIN1Q9BWE0 567 aaKnown RBP13.86□□□□□ -0.19
A1CF-209ENST00000473480 PCDHB3Q9Y5E6 796 aa13.86□□□□□ -0.19
A1CF-209ENST00000473480 GCGRP47871 477 aa13.85□□□□□ -0.19
A1CF-209ENST00000473480 MTRQ99707 1265 aa13.85□□□□□ -0.19
A1CF-209ENST00000473480 ATAD2BQ9ULI0 1458 aa13.85□□□□□ -0.19
A1CF-209ENST00000473480 KCNC4Q03721 635 aa13.84□□□□□ -0.19
A1CF-209ENST00000473480 PDE4DQ08499 809 aa13.84□□□□□ -0.19
A1CF-209ENST00000473480 TPRNQ4KMQ1 711 aa13.84□□□□□ -0.19
A1CF-209ENST00000473480 TJAP1Q5JTD0 557 aa13.84□□□□□ -0.19
A1CF-209ENST00000473480 IFFO2Q5TF58 517 aa13.83□□□□□ -0.2
A1CF-209ENST00000473480 GIGYF2Q6Y7W6 1299 aaKnown RBP13.83□□□□□ -0.2
A1CF-209ENST00000473480 PARP9Q8IXQ6 854 aa13.83□□□□□ -0.2
A1CF-209ENST00000473480 IL21Q9HBE4 155 aa13.83□□□□□ -0.2
A1CF-209ENST00000473480 HMGXB3Q12766 1538 aa13.83□□□□□ -0.2
A1CF-209ENST00000473480 SSTR3P32745 418 aaPredicted RBP13.81□□□□□ -0.2
A1CF-209ENST00000473480 MRC2Q9UBG0 1479 aa13.8□□□□□ -0.2
A1CF-209ENST00000473480 COPS2P61201 443 aa13.8□□□□□ -0.2
A1CF-209ENST00000473480 BLOC1S3Q6QNY0 202 aa13.78□□□□□ -0.2
A1CF-209ENST00000473480 WDR62O43379 1518 aa13.78□□□□□ -0.2
A1CF-209ENST00000473480 FUT2Q10981 343 aa13.77□□□□□ -0.21
A1CF-209ENST00000473480 ATP6V1AP38606 617 aa13.76□□□□□ -0.21
A1CF-209ENST00000473480 GRIPAP1Q4V328 841 aa13.76□□□□□ -0.21
A1CF-209ENST00000473480 KDM4AO75164 1064 aa13.75□□□□□ -0.21
A1CF-209ENST00000473480 NR1I2O75469 434 aa13.75□□□□□ -0.21
A1CF-209ENST00000473480 ZPR1O75312 459 aa13.74□□□□□ -0.21
A1CF-209ENST00000473480 PUS10Q3MIT2 529 aaKnown RBP13.74□□□□□ -0.21
A1CF-209ENST00000473480 ZNF516Q92618 1163 aa13.74□□□□□ -0.21
A1CF-209ENST00000473480 USP46P62068 366 aa13.73□□□□□ -0.21
A1CF-209ENST00000473480 MORN1Q5T089 497 aa13.72□□□□□ -0.21
A1CF-209ENST00000473480 NUTM1Q86Y26 1132 aa13.72□□□□□ -0.21
A1CF-209ENST00000473480 MS4A1P11836 297 aa13.71□□□□□ -0.21
A1CF-209ENST00000473480 BEGAINQ9BUH8 593 aa13.71□□□□□ -0.21
A1CF-209ENST00000473480 SCUBE3Q8IX30 993 aa13.7□□□□□ -0.22
A1CF-209ENST00000473480 A0A0G2JS52 829 aa13.67□□□□□ -0.22
A1CF-209ENST00000473480 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms