RNA–Protein interactions for RNA: ENST00000473222.1

NR1H3-218, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-218ENST00000473222 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.82■■□□□ 1.72
NR1H3-218ENST00000473222 NCKAP5LQ9HCH0 1330 aa25.82■■□□□ 1.72
NR1H3-218ENST00000473222 STRCQ7RTU9 1775 aa25.82■■□□□ 1.72
NR1H3-218ENST00000473222 CLSPNQ9HAW4 1339 aa25.81■■□□□ 1.72
NR1H3-218ENST00000473222 ZFYVE9O95405 1425 aa25.8■■□□□ 1.72
NR1H3-218ENST00000473222 RIMS2Q9UQ26 1411 aa25.8■■□□□ 1.72
NR1H3-218ENST00000473222 CCER1Q8TC90 406 aaPredicted RBP25.77■■□□□ 1.72
NR1H3-218ENST00000473222 NEUROD1Q13562 356 aa25.76■■□□□ 1.71
NR1H3-218ENST00000473222 DMRT2Q9Y5R5 561 aa25.76■■□□□ 1.71
NR1H3-218ENST00000473222 MED14O60244 1454 aa25.75■■□□□ 1.71
NR1H3-218ENST00000473222 SCAF11Q99590 1463 aaKnown RBP25.75■■□□□ 1.71
NR1H3-218ENST00000473222 VGFO15240 615 aaPredicted RBP25.74■■□□□ 1.71
NR1H3-218ENST00000473222 NUTM2DQ5VT03 806 aaPredicted RBP25.73■■□□□ 1.71
NR1H3-218ENST00000473222 POLR1AO95602 1720 aaPredicted RBP25.73■■□□□ 1.71
NR1H3-218ENST00000473222 NEXMIFQ5QGS0 1516 aa25.73■■□□□ 1.71
NR1H3-218ENST00000473222 STAC3Q96MF2 364 aa25.72■■□□□ 1.71
NR1H3-218ENST00000473222 PPP1R15AO75807 674 aaPredicted RBP25.71■■□□□ 1.71
NR1H3-218ENST00000473222 PPLO60437 1756 aa25.7■■□□□ 1.7
NR1H3-218ENST00000473222 NPHP4O75161 1426 aaPredicted RBP25.69■■□□□ 1.7
NR1H3-218ENST00000473222 PLEKHG1Q9ULL1 1385 aa25.69■■□□□ 1.7
NR1H3-218ENST00000473222 DCAF11Q8TEB1 546 aa25.67■■□□□ 1.7
NR1H3-218ENST00000473222 IFT172Q9UG01 1749 aa25.67■■□□□ 1.7
NR1H3-218ENST00000473222 L3MBTL2Q969R5 705 aa25.66■■□□□ 1.7
NR1H3-218ENST00000473222 ADGRF5Q8IZF2 1346 aa25.64■■□□□ 1.7
NR1H3-218ENST00000473222 KDM2AQ9Y2K7 1162 aa25.64■■□□□ 1.7
NR1H3-218ENST00000473222 BCANQ96GW7 911 aa25.63■■□□□ 1.69
NR1H3-218ENST00000473222 TBX22Q9Y458 520 aa25.63■■□□□ 1.69
NR1H3-218ENST00000473222 IQGAP1P46940 1657 aa25.62■■□□□ 1.69
NR1H3-218ENST00000473222 SLC26A8Q96RN1 970 aa25.6■■□□□ 1.69
NR1H3-218ENST00000473222 TIMELESSQ9UNS1 1208 aa25.6■■□□□ 1.69
NR1H3-218ENST00000473222 MYOM2P54296 1465 aa25.59■■□□□ 1.69
NR1H3-218ENST00000473222 NRXN1Q9ULB1 1477 aa25.58■■□□□ 1.69
NR1H3-218ENST00000473222 ADAMTS13Q76LX8 1427 aa25.57■■□□□ 1.68
NR1H3-218ENST00000473222 SENP3Q9H4L4 574 aaPredicted RBP25.57■■□□□ 1.68
NR1H3-218ENST00000473222 TONSLQ96HA7 1378 aa25.56■■□□□ 1.68
NR1H3-218ENST00000473222 SETBP1Q9Y6X0 1596 aa25.56■■□□□ 1.68
NR1H3-218ENST00000473222 C14orf93Q9H972 538 aaKnown RBP25.54■■□□□ 1.68
NR1H3-218ENST00000473222 NRXN3Q9Y4C0 1643 aa25.54■■□□□ 1.68
NR1H3-218ENST00000473222 PIK3C2GO75747 1445 aa25.53■■□□□ 1.68
NR1H3-218ENST00000473222 DIP2AQ14689 1571 aa25.5■■□□□ 1.67
NR1H3-218ENST00000473222 ALKQ9UM73 1620 aa25.5■■□□□ 1.67
NR1H3-218ENST00000473222 PIK3R4Q99570 1358 aa25.49■■□□□ 1.67
NR1H3-218ENST00000473222 CFAP70Q5T0N1 1121 aa25.49■■□□□ 1.67
NR1H3-218ENST00000473222 KCNA6P17658 529 aa25.48■■□□□ 1.67
NR1H3-218ENST00000473222 PRAG1Q86YV5 1406 aa25.46■■□□□ 1.67
NR1H3-218ENST00000473222 METP08581 1390 aa25.46■■□□□ 1.67
NR1H3-218ENST00000473222 CHD2O14647 1828 aaKnown RBP25.46■■□□□ 1.67
NR1H3-218ENST00000473222 ZNF335Q9H4Z2 1342 aaPredicted RBP25.45■■□□□ 1.66
NR1H3-218ENST00000473222 SETD1AO15047 1707 aaKnown RBP25.45■■□□□ 1.66
NR1H3-218ENST00000473222 NBPF8Q3BBV2 869 aa25.43■■□□□ 1.66
NR1H3-218ENST00000473222 TMEM132EQ6IEE7 984 aa25.42■■□□□ 1.66
NR1H3-218ENST00000473222 AMOTL2Q9Y2J4 779 aa25.42■■□□□ 1.66
NR1H3-218ENST00000473222 PTPRUQ92729 1446 aa25.4■■□□□ 1.66
NR1H3-218ENST00000473222 LAMC1P11047 1609 aa25.4■■□□□ 1.66
NR1H3-218ENST00000473222 KIAA1210Q9ULL0 1709 aa25.4■■□□□ 1.66
NR1H3-218ENST00000473222 STRCP1A6NGW2 1772 aa25.39■■□□□ 1.65
NR1H3-218ENST00000473222 NBPF1Q3BBV0 1214 aa25.38■■□□□ 1.65
NR1H3-218ENST00000473222 LTBP4Q8N2S1 1624 aa25.37■■□□□ 1.65
NR1H3-218ENST00000473222 LRPPRCP42704 1394 aaKnown RBP25.34■■□□□ 1.65
NR1H3-218ENST00000473222 ABCC11Q96J66 1382 aa25.34■■□□□ 1.65
NR1H3-218ENST00000473222 NWD1Q149M9 1564 aa25.34■■□□□ 1.65
NR1H3-218ENST00000473222 ASXL1Q8IXJ9 1541 aa25.33■■□□□ 1.65
NR1H3-218ENST00000473222 ADGRB1O14514 1584 aa25.33■■□□□ 1.65
NR1H3-218ENST00000473222 SIRT1Q96EB6 747 aa25.33■■□□□ 1.65
NR1H3-218ENST00000473222 YTHDC2Q9H6S0 1430 aaKnown RBP25.32■■□□□ 1.64
NR1H3-218ENST00000473222 PROSER2Q86WR7 435 aaPredicted RBP25.32■■□□□ 1.64
NR1H3-218ENST00000473222 STK26Q9P289 416 aa25.32■■□□□ 1.64
NR1H3-218ENST00000473222 CPS1P31327 1500 aa25.32■■□□□ 1.64
NR1H3-218ENST00000473222 TRPM1Q7Z4N2 1603 aa25.31■■□□□ 1.64
NR1H3-218ENST00000473222 XRN1Q8IZH2 1706 aaKnown RBP25.3■■□□□ 1.64
NR1H3-218ENST00000473222 NKTRP30414 1462 aaKnown RBP25.29■■□□□ 1.64
NR1H3-218ENST00000473222 TECPR2O15040 1411 aa25.28■■□□□ 1.64
NR1H3-218ENST00000473222 GPRASP1Q5JY77 1395 aa25.27■■□□□ 1.64
NR1H3-218ENST00000473222 LRRC7Q96NW7 1537 aa25.27■■□□□ 1.64
NR1H3-218ENST00000473222 CERKQ8TCT0 537 aa25.25■■□□□ 1.63
NR1H3-218ENST00000473222 TRAK1Q9UPV9 953 aa25.25■■□□□ 1.63
NR1H3-218ENST00000473222 ROCK2O75116 1388 aaKnown RBP25.25■■□□□ 1.63
NR1H3-218ENST00000473222 ROBO2Q9HCK4 1378 aa25.25■■□□□ 1.63
NR1H3-218ENST00000473222 RALGAPBQ86X10 1494 aa25.25■■□□□ 1.63
NR1H3-218ENST00000473222 PTCH1Q13635 1447 aa25.24■■□□□ 1.63
NR1H3-218ENST00000473222 NCOA3Q9Y6Q9 1424 aa25.24■■□□□ 1.63
NR1H3-218ENST00000473222 KNDC1Q76NI1 1749 aa25.23■■□□□ 1.63
NR1H3-218ENST00000473222 FAM135BQ49AJ0 1406 aa25.22■■□□□ 1.63
NR1H3-218ENST00000473222 TMEM94Q12767 1356 aa25.22■■□□□ 1.63
NR1H3-218ENST00000473222 WAPLQ7Z5K2 1190 aa25.22■■□□□ 1.63
NR1H3-218ENST00000473222 RBM33Q96EV2 1170 aaKnown RBP25.22■■□□□ 1.63
NR1H3-218ENST00000473222 CARD11Q9BXL7 1154 aa25.21■■□□□ 1.63
NR1H3-218ENST00000473222 DLC1Q96QB1 1528 aa25.21■■□□□ 1.63
NR1H3-218ENST00000473222 XIRP1Q702N8 1843 aaKnown RBP25.21■■□□□ 1.63
NR1H3-218ENST00000473222 PRAM1Q96QH2 718 aa25.18■■□□□ 1.62
NR1H3-218ENST00000473222 POGKQ9P215 609 aa25.17■■□□□ 1.62
NR1H3-218ENST00000473222 IQSEC2Q5JU85 1478 aa25.16■■□□□ 1.62
NR1H3-218ENST00000473222 C19orf44Q9H6X5 657 aa25.16■■□□□ 1.62
NR1H3-218ENST00000473222 PLEKHH1Q9ULM0 1364 aa25.15■■□□□ 1.62
NR1H3-218ENST00000473222 ARHGEF28Q8N1W1 1705 aaKnown RBP25.13■■□□□ 1.61
NR1H3-218ENST00000473222 ZEB1P37275 1124 aaPredicted RBP25.12■■□□□ 1.61
NR1H3-218ENST00000473222 C14orf37Q86TY3 774 aa25.12■■□□□ 1.61
NR1H3-218ENST00000473222 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.1■■□□□ 1.61
NR1H3-218ENST00000473222 SAFB2Q14151 953 aaKnown RBP eCLIP25.1■■□□□ 1.61
NR1H3-218ENST00000473222 MSH6P52701 1360 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms