RNA–Protein interactions for RNA: ENST00000473140.1

AGAP3-210, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 4

Gene AGAP3, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-210ENST00000473140 ROBO1Q9Y6N7 1651 aa22.5■■□□□ 1.19
AGAP3-210ENST00000473140 JCADQ9P266 1359 aa22.48■■□□□ 1.19
AGAP3-210ENST00000473140 FGD6Q6ZV73 1430 aa22.48■■□□□ 1.19
AGAP3-210ENST00000473140 PPP1R15AO75807 674 aaPredicted RBP22.47■■□□□ 1.19
AGAP3-210ENST00000473140 ADGRB3O60242 1522 aa22.46■■□□□ 1.19
AGAP3-210ENST00000473140 NWD1Q149M9 1564 aa22.43■■□□□ 1.18
AGAP3-210ENST00000473140 RPRD2Q5VT52 1461 aaKnown RBP22.43■■□□□ 1.18
AGAP3-210ENST00000473140 PLEKHG1Q9ULL1 1385 aa22.43■■□□□ 1.18
AGAP3-210ENST00000473140 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.43■■□□□ 1.18
AGAP3-210ENST00000473140 TBX22Q9Y458 520 aa22.43■■□□□ 1.18
AGAP3-210ENST00000473140 NCOA3Q9Y6Q9 1424 aa22.42■■□□□ 1.18
AGAP3-210ENST00000473140 C14orf37Q86TY3 774 aa22.4■■□□□ 1.18
AGAP3-210ENST00000473140 SPATA31A6Q5VVP1 1343 aa22.39■■□□□ 1.18
AGAP3-210ENST00000473140 PHLPP1O60346 1717 aa22.39■■□□□ 1.17
AGAP3-210ENST00000473140 RIMS2Q9UQ26 1411 aa22.39■■□□□ 1.17
AGAP3-210ENST00000473140 ZNF772Q68DY9 489 aaPredicted RBP22.38■■□□□ 1.17
AGAP3-210ENST00000473140 CADPS2Q86UW7 1296 aa22.38■■□□□ 1.17
AGAP3-210ENST00000473140 ZFYVE9O95405 1425 aa22.38■■□□□ 1.17
AGAP3-210ENST00000473140 ADGRL2O95490 1459 aa22.37■■□□□ 1.17
AGAP3-210ENST00000473140 MEX3CQ5U5Q3 659 aaKnown RBP22.37■■□□□ 1.17
AGAP3-210ENST00000473140 C19orf44Q9H6X5 657 aa22.37■■□□□ 1.17
AGAP3-210ENST00000473140 ATF3P18847 181 aa22.36■■□□□ 1.17
AGAP3-210ENST00000473140 ANKRD50Q9ULJ7 1429 aa22.36■■□□□ 1.17
AGAP3-210ENST00000473140 CHD2O14647 1828 aaKnown RBP22.36■■□□□ 1.17
AGAP3-210ENST00000473140 CHGAP10645 457 aaKnown RBP22.35■■□□□ 1.17
AGAP3-210ENST00000473140 FAM50AQ14320 339 aaKnown RBP22.35■■□□□ 1.17
AGAP3-210ENST00000473140 PIK3R4Q99570 1358 aa22.33■■□□□ 1.17
AGAP3-210ENST00000473140 TMEM131LA2VDJ0 1609 aa22.28■■□□□ 1.16
AGAP3-210ENST00000473140 COL16A1Q07092 1604 aaPredicted RBP22.28■■□□□ 1.16
AGAP3-210ENST00000473140 UPF1Q92900 1129 aaKnown RBP eCLIP22.26■■□□□ 1.15
AGAP3-210ENST00000473140 GCC2Q8IWJ2 1684 aa22.26■■□□□ 1.15
AGAP3-210ENST00000473140 MYO5BQ9ULV0 1848 aa22.25■■□□□ 1.15
AGAP3-210ENST00000473140 RXRBP28702 533 aa22.25■■□□□ 1.15
AGAP3-210ENST00000473140 NUTM2DQ5VT03 806 aaPredicted RBP22.25■■□□□ 1.15
AGAP3-210ENST00000473140 AMOTL2Q9Y2J4 779 aa22.25■■□□□ 1.15
AGAP3-210ENST00000473140 DIP2AQ14689 1571 aa22.25■■□□□ 1.15
AGAP3-210ENST00000473140 ADAMTS13Q76LX8 1427 aa22.24■■□□□ 1.15
AGAP3-210ENST00000473140 TRIM52Q96A61 297 aa22.24■■□□□ 1.15
AGAP3-210ENST00000473140 AHDC1Q5TGY3 1603 aaPredicted RBP22.23■■□□□ 1.15
AGAP3-210ENST00000473140 SETD1AO15047 1707 aaKnown RBP22.22■■□□□ 1.15
AGAP3-210ENST00000473140 LRP6O75581 1613 aa22.21■■□□□ 1.15
AGAP3-210ENST00000473140 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.21■■□□□ 1.15
AGAP3-210ENST00000473140 BRINP3Q76B58 766 aa22.21■■□□□ 1.15
AGAP3-210ENST00000473140 NUTM2BA6NNL0 878 aaPredicted RBP22.19■■□□□ 1.14
AGAP3-210ENST00000473140 NUTM2EB1AL46 878 aaPredicted RBP22.19■■□□□ 1.14
AGAP3-210ENST00000473140 NUTM2AQ8IVF1 878 aaPredicted RBP22.19■■□□□ 1.14
AGAP3-210ENST00000473140 TRPM2O94759 1503 aa22.19■■□□□ 1.14
AGAP3-210ENST00000473140 SHPRHQ149N8 1683 aa22.19■■□□□ 1.14
AGAP3-210ENST00000473140 DCCP43146 1447 aa22.17■■□□□ 1.14
AGAP3-210ENST00000473140 LRRC59Q96AG4 307 aaKnown RBP22.17■■□□□ 1.14
AGAP3-210ENST00000473140 UNC13BO14795 1591 aa22.16■■□□□ 1.14
AGAP3-210ENST00000473140 ROCK1Q13464 1354 aa22.16■■□□□ 1.14
AGAP3-210ENST00000473140 CDK12Q9NYV4 1490 aaPredicted RBP22.15■■□□□ 1.14
AGAP3-210ENST00000473140 NUP155O75694 1391 aa22.14■■□□□ 1.14
AGAP3-210ENST00000473140 E9PCH4 1651 aa22.14■■□□□ 1.13
AGAP3-210ENST00000473140 AFF2P51816 1311 aa22.12■■□□□ 1.13
AGAP3-210ENST00000473140 PTPRUQ92729 1446 aa22.12■■□□□ 1.13
AGAP3-210ENST00000473140 SETD5Q9C0A6 1442 aa22.12■■□□□ 1.13
AGAP3-210ENST00000473140 ZNF326Q5BKZ1 582 aaKnown RBP22.11■■□□□ 1.13
AGAP3-210ENST00000473140 IQGAP3Q86VI3 1631 aa22.09■■□□□ 1.13
AGAP3-210ENST00000473140 RBM6P78332 1123 aaKnown RBP22.08■■□□□ 1.13
AGAP3-210ENST00000473140 QTRT2Q9H974 415 aaKnown RBP22.08■■□□□ 1.13
AGAP3-210ENST00000473140 ASXL1Q8IXJ9 1541 aa22.07■■□□□ 1.12
AGAP3-210ENST00000473140 MST1RQ04912 1400 aa22.06■■□□□ 1.12
AGAP3-210ENST00000473140 C8orf37Q96NL8 207 aa22.05■■□□□ 1.12
AGAP3-210ENST00000473140 NGLY1Q96IV0 654 aa22.04■■□□□ 1.12
AGAP3-210ENST00000473140 SETBP1Q9Y6X0 1596 aa22.04■■□□□ 1.12
AGAP3-210ENST00000473140 METP08581 1390 aa22.01■■□□□ 1.11
AGAP3-210ENST00000473140 XRN1Q8IZH2 1706 aaKnown RBP22.01■■□□□ 1.11
AGAP3-210ENST00000473140 ITGAEP38570 1179 aa22.01■■□□□ 1.11
AGAP3-210ENST00000473140 ADGRL3Q9HAR2 1447 aa22■■□□□ 1.11
AGAP3-210ENST00000473140 NHSL1Q5SYE7 1610 aa22■■□□□ 1.11
AGAP3-210ENST00000473140 FOXD1Q16676 465 aa22■■□□□ 1.11
AGAP3-210ENST00000473140 PNPLA6Q8IY17 1366 aa21.99■■□□□ 1.11
AGAP3-210ENST00000473140 DDX17Q92841 729 aaKnown RBP21.98■■□□□ 1.11
AGAP3-210ENST00000473140 NRXN3Q9Y4C0 1643 aa21.97■■□□□ 1.11
AGAP3-210ENST00000473140 ADAMTS2O95450 1211 aa21.96■■□□□ 1.11
AGAP3-210ENST00000473140 VGFO15240 615 aaPredicted RBP21.95■■□□□ 1.1
AGAP3-210ENST00000473140 RGS12O14924 1447 aa21.94■■□□□ 1.1
AGAP3-210ENST00000473140 SPHKAPQ2M3C7 1700 aa21.94■■□□□ 1.1
AGAP3-210ENST00000473140 C1orf167Q5SNV9 1468 aa21.93■■□□□ 1.1
AGAP3-210ENST00000473140 USP21Q9UK80 565 aa21.93■■□□□ 1.1
AGAP3-210ENST00000473140 TRPC5Q9UL62 973 aaPredicted RBP21.93■■□□□ 1.1
AGAP3-210ENST00000473140 ATAD2Q6PL18 1390 aa21.92■■□□□ 1.1
AGAP3-210ENST00000473140 SOS2Q07890 1332 aaPredicted RBP21.92■■□□□ 1.1
AGAP3-210ENST00000473140 FNBP4Q8N3X1 1017 aaPredicted RBP21.89■■□□□ 1.09
AGAP3-210ENST00000473140 ORAI2Q96SN7 254 aa21.89■■□□□ 1.09
AGAP3-210ENST00000473140 PTCH1Q13635 1447 aa21.88■■□□□ 1.09
AGAP3-210ENST00000473140 RPGRIP1LQ68CZ1 1315 aa21.87■■□□□ 1.09
AGAP3-210ENST00000473140 NEXMIFQ5QGS0 1516 aa21.87■■□□□ 1.09
AGAP3-210ENST00000473140 CCDC125Q86Z20 511 aa21.86■■□□□ 1.09
AGAP3-210ENST00000473140 NALCNQ8IZF0 1738 aa21.86■■□□□ 1.09
AGAP3-210ENST00000473140 ZRANB1Q9UGI0 708 aa21.85■■□□□ 1.09
AGAP3-210ENST00000473140 LAMC1P11047 1609 aa21.84■■□□□ 1.09
AGAP3-210ENST00000473140 KIF1BO60333 1816 aa21.83■■□□□ 1.09
AGAP3-210ENST00000473140 ROBO2Q9HCK4 1378 aa21.83■■□□□ 1.08
AGAP3-210ENST00000473140 NPHP3Q7Z494 1330 aa21.82■■□□□ 1.08
AGAP3-210ENST00000473140 HFM1A2PYH4 1435 aa21.82■■□□□ 1.08
AGAP3-210ENST00000473140 CLTCL1P53675 1640 aa21.82■■□□□ 1.08
AGAP3-210ENST00000473140 ESCO1Q5FWF5 840 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms