RNA–Protein interactions for RNA: ENST00000472962.1

CCDC142-205, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-205ENST00000472962 MYO5BQ9ULV0 1848 aa24.28■■□□□ 1.48
CCDC142-205ENST00000472962 SLC52A1Q9NWF4 448 aa24.27■■□□□ 1.48
CCDC142-205ENST00000472962 NKTRP30414 1462 aaKnown RBP24.26■■□□□ 1.47
CCDC142-205ENST00000472962 C14orf37Q86TY3 774 aa24.26■■□□□ 1.47
CCDC142-205ENST00000472962 HDGFP51858 240 aaKnown RBP24.24■■□□□ 1.47
CCDC142-205ENST00000472962 FAM50AQ14320 339 aaKnown RBP24.24■■□□□ 1.47
CCDC142-205ENST00000472962 SLAIN2Q9P270 581 aa24.24■■□□□ 1.47
CCDC142-205ENST00000472962 CHGAP10645 457 aaKnown RBP24.23■■□□□ 1.47
CCDC142-205ENST00000472962 NOS1P29475 1434 aa24.23■■□□□ 1.47
CCDC142-205ENST00000472962 NWD1Q149M9 1564 aa24.23■■□□□ 1.47
CCDC142-205ENST00000472962 GCC2Q8IWJ2 1684 aa24.22■■□□□ 1.47
CCDC142-205ENST00000472962 CHD2O14647 1828 aaKnown RBP24.21■■□□□ 1.47
CCDC142-205ENST00000472962 SETD1AO15047 1707 aaKnown RBP24.21■■□□□ 1.47
CCDC142-205ENST00000472962 JCADQ9P266 1359 aa24.18■■□□□ 1.46
CCDC142-205ENST00000472962 MEX3CQ5U5Q3 659 aaKnown RBP24.18■■□□□ 1.46
CCDC142-205ENST00000472962 RIMS2Q9UQ26 1411 aa24.17■■□□□ 1.46
CCDC142-205ENST00000472962 PLEKHG1Q9ULL1 1385 aa24.16■■□□□ 1.46
CCDC142-205ENST00000472962 RPRD2Q5VT52 1461 aaKnown RBP24.15■■□□□ 1.46
CCDC142-205ENST00000472962 ANKRD50Q9ULJ7 1429 aa24.15■■□□□ 1.46
CCDC142-205ENST00000472962 NUTM2DQ5VT03 806 aaPredicted RBP24.14■■□□□ 1.45
CCDC142-205ENST00000472962 ADGRL2O95490 1459 aa24.13■■□□□ 1.45
CCDC142-205ENST00000472962 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.12■■□□□ 1.45
CCDC142-205ENST00000472962 ZFYVE9O95405 1425 aa24.11■■□□□ 1.45
CCDC142-205ENST00000472962 TMEM131LA2VDJ0 1609 aa24.11■■□□□ 1.45
CCDC142-205ENST00000472962 ATF3P18847 181 aa24.11■■□□□ 1.45
CCDC142-205ENST00000472962 COL16A1Q07092 1604 aaPredicted RBP24.09■■□□□ 1.45
CCDC142-205ENST00000472962 TBX22Q9Y458 520 aa24.08■■□□□ 1.45
CCDC142-205ENST00000472962 CADPS2Q86UW7 1296 aa24.07■■□□□ 1.44
CCDC142-205ENST00000472962 TRIM52Q96A61 297 aa24.07■■□□□ 1.44
CCDC142-205ENST00000472962 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.07■■□□□ 1.44
CCDC142-205ENST00000472962 ZNF772Q68DY9 489 aaPredicted RBP24.05■■□□□ 1.44
CCDC142-205ENST00000472962 SPATA31A6Q5VVP1 1343 aa24.05■■□□□ 1.44
CCDC142-205ENST00000472962 C19orf44Q9H6X5 657 aa24.04■■□□□ 1.44
CCDC142-205ENST00000472962 E9PCH4 1651 aa24.03■■□□□ 1.44
CCDC142-205ENST00000472962 NCOA3Q9Y6Q9 1424 aa24.02■■□□□ 1.44
CCDC142-205ENST00000472962 NUTM2BA6NNL0 878 aaPredicted RBP24.02■■□□□ 1.44
CCDC142-205ENST00000472962 NUTM2EB1AL46 878 aaPredicted RBP24.02■■□□□ 1.44
CCDC142-205ENST00000472962 NUTM2AQ8IVF1 878 aaPredicted RBP24.02■■□□□ 1.44
CCDC142-205ENST00000472962 UNC13BO14795 1591 aa24.01■■□□□ 1.43
CCDC142-205ENST00000472962 DIP2AQ14689 1571 aa24.01■■□□□ 1.43
CCDC142-205ENST00000472962 LRP6O75581 1613 aa24■■□□□ 1.43
CCDC142-205ENST00000472962 SHPRHQ149N8 1683 aa23.99■■□□□ 1.43
CCDC142-205ENST00000472962 AMOTL2Q9Y2J4 779 aa23.98■■□□□ 1.43
CCDC142-205ENST00000472962 ADAMTS13Q76LX8 1427 aa23.98■■□□□ 1.43
CCDC142-205ENST00000472962 TRPM2O94759 1503 aa23.98■■□□□ 1.43
CCDC142-205ENST00000472962 AHDC1Q5TGY3 1603 aaPredicted RBP23.98■■□□□ 1.43
CCDC142-205ENST00000472962 PIK3R4Q99570 1358 aa23.97■■□□□ 1.43
CCDC142-205ENST00000472962 RXRBP28702 533 aa23.95■■□□□ 1.42
CCDC142-205ENST00000472962 ITGAEP38570 1179 aa23.95■■□□□ 1.42
CCDC142-205ENST00000472962 IQGAP3Q86VI3 1631 aa23.94■■□□□ 1.42
CCDC142-205ENST00000472962 ZNF326Q5BKZ1 582 aaKnown RBP23.93■■□□□ 1.42
CCDC142-205ENST00000472962 UPF1Q92900 1129 aaKnown RBP eCLIP23.93■■□□□ 1.42
CCDC142-205ENST00000472962 NUP155O75694 1391 aa23.92■■□□□ 1.42
CCDC142-205ENST00000472962 BRINP3Q76B58 766 aa23.92■■□□□ 1.42
CCDC142-205ENST00000472962 PTPRUQ92729 1446 aa23.87■■□□□ 1.41
CCDC142-205ENST00000472962 AFF2P51816 1311 aa23.86■■□□□ 1.41
CCDC142-205ENST00000472962 ASXL1Q8IXJ9 1541 aa23.85■■□□□ 1.41
CCDC142-205ENST00000472962 SPHKAPQ2M3C7 1700 aa23.85■■□□□ 1.41
CCDC142-205ENST00000472962 ROCK1Q13464 1354 aa23.85■■□□□ 1.41
CCDC142-205ENST00000472962 LRRC59Q96AG4 307 aaKnown RBP23.84■■□□□ 1.41
CCDC142-205ENST00000472962 C8orf37Q96NL8 207 aa23.84■■□□□ 1.41
CCDC142-205ENST00000472962 DCCP43146 1447 aa23.84■■□□□ 1.41
CCDC142-205ENST00000472962 XRN1Q8IZH2 1706 aaKnown RBP23.82■■□□□ 1.4
CCDC142-205ENST00000472962 NHSL1Q5SYE7 1610 aa23.82■■□□□ 1.4
CCDC142-205ENST00000472962 NRXN3Q9Y4C0 1643 aa23.81■■□□□ 1.4
CCDC142-205ENST00000472962 SETBP1Q9Y6X0 1596 aa23.79■■□□□ 1.4
CCDC142-205ENST00000472962 MST1RQ04912 1400 aa23.79■■□□□ 1.4
CCDC142-205ENST00000472962 DDX17Q92841 729 aaKnown RBP23.79■■□□□ 1.4
CCDC142-205ENST00000472962 SETD5Q9C0A6 1442 aa23.78■■□□□ 1.4
CCDC142-205ENST00000472962 QTRT2Q9H974 415 aaKnown RBP23.78■■□□□ 1.4
CCDC142-205ENST00000472962 CDK12Q9NYV4 1490 aaPredicted RBP23.77■■□□□ 1.4
CCDC142-205ENST00000472962 METP08581 1390 aa23.76■■□□□ 1.39
CCDC142-205ENST00000472962 KIF1BO60333 1816 aa23.75■■□□□ 1.39
CCDC142-205ENST00000472962 ADAMTS2O95450 1211 aa23.75■■□□□ 1.39
CCDC142-205ENST00000472962 NGLY1Q96IV0 654 aa23.75■■□□□ 1.39
CCDC142-205ENST00000472962 NALCNQ8IZF0 1738 aa23.75■■□□□ 1.39
CCDC142-205ENST00000472962 RBM6P78332 1123 aaKnown RBP23.74■■□□□ 1.39
CCDC142-205ENST00000472962 PPARGC1BQ86YN6 1023 aaKnown RBP23.74■■□□□ 1.39
CCDC142-205ENST00000472962 ADGRL3Q9HAR2 1447 aa23.74■■□□□ 1.39
CCDC142-205ENST00000472962 PNPLA6Q8IY17 1366 aa23.71■■□□□ 1.39
CCDC142-205ENST00000472962 RGS12O14924 1447 aa23.69■■□□□ 1.38
CCDC142-205ENST00000472962 CLTCL1P53675 1640 aa23.69■■□□□ 1.38
CCDC142-205ENST00000472962 NEXMIFQ5QGS0 1516 aa23.67■■□□□ 1.38
CCDC142-205ENST00000472962 C1orf167Q5SNV9 1468 aa23.64■■□□□ 1.38
CCDC142-205ENST00000472962 USP21Q9UK80 565 aa23.64■■□□□ 1.37
CCDC142-205ENST00000472962 VGFO15240 615 aaPredicted RBP23.62■■□□□ 1.37
CCDC142-205ENST00000472962 ORAI2Q96SN7 254 aa23.62■■□□□ 1.37
CCDC142-205ENST00000472962 ATAD2Q6PL18 1390 aa23.61■■□□□ 1.37
CCDC142-205ENST00000472962 TRPC5Q9UL62 973 aaPredicted RBP23.59■■□□□ 1.37
CCDC142-205ENST00000472962 FOXD1Q16676 465 aa23.58■■□□□ 1.37
CCDC142-205ENST00000472962 PTCH1Q13635 1447 aa23.57■■□□□ 1.36
CCDC142-205ENST00000472962 ROBO2Q9HCK4 1378 aa23.56■■□□□ 1.36
CCDC142-205ENST00000472962 SOS2Q07890 1332 aaPredicted RBP23.56■■□□□ 1.36
CCDC142-205ENST00000472962 ESCO1Q5FWF5 840 aa23.55■■□□□ 1.36
CCDC142-205ENST00000472962 LAMC1P11047 1609 aa23.54■■□□□ 1.36
CCDC142-205ENST00000472962 ZRANB1Q9UGI0 708 aa23.51■■□□□ 1.35
CCDC142-205ENST00000472962 HFM1A2PYH4 1435 aa23.5■■□□□ 1.35
CCDC142-205ENST00000472962 PPLO60437 1756 aa23.5■■□□□ 1.35
CCDC142-205ENST00000472962 NPHP3Q7Z494 1330 aa23.5■■□□□ 1.35
CCDC142-205ENST00000472962 XPCQ01831 940 aaPredicted RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms