RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 SLC4A1APQ9BWU0 796 aaKnown RBP29.06■■■□□ 2.24
COMMD1-208ENST00000472729 RIMS2Q9UQ26 1411 aa29.05■■■□□ 2.24
COMMD1-208ENST00000472729 ZNF326Q5BKZ1 582 aaKnown RBP29.05■■■□□ 2.24
COMMD1-208ENST00000472729 E9PCH4 1651 aa29.02■■■□□ 2.24
COMMD1-208ENST00000472729 NUTM2DQ5VT03 806 aaPredicted RBP29.02■■■□□ 2.24
COMMD1-208ENST00000472729 KCNA6P17658 529 aa29.01■■■□□ 2.23
COMMD1-208ENST00000472729 PLEKHG1Q9ULL1 1385 aa29■■■□□ 2.23
COMMD1-208ENST00000472729 PROSER2Q86WR7 435 aaPredicted RBP28.97■■■□□ 2.23
COMMD1-208ENST00000472729 ACIN1Q9UKV3 1341 aaKnown RBP28.96■■■□□ 2.23
COMMD1-208ENST00000472729 ZFYVE9O95405 1425 aa28.96■■■□□ 2.23
COMMD1-208ENST00000472729 LRRC7Q96NW7 1537 aa28.95■■■□□ 2.23
COMMD1-208ENST00000472729 TMEM131LA2VDJ0 1609 aa28.94■■■□□ 2.22
COMMD1-208ENST00000472729 TBX22Q9Y458 520 aa28.93■■■□□ 2.22
COMMD1-208ENST00000472729 TMEM94Q12767 1356 aa28.87■■■□□ 2.21
COMMD1-208ENST00000472729 C14orf37Q86TY3 774 aa28.85■■■□□ 2.21
COMMD1-208ENST00000472729 MPHOSPH9Q99550 1183 aa28.85■■■□□ 2.21
COMMD1-208ENST00000472729 HSPA1LP34931 641 aa28.83■■■□□ 2.21
COMMD1-208ENST00000472729 RBM33Q96EV2 1170 aaKnown RBP28.83■■■□□ 2.21
COMMD1-208ENST00000472729 FOXD1Q16676 465 aa28.82■■■□□ 2.2
COMMD1-208ENST00000472729 SETD5Q9C0A6 1442 aa28.82■■■□□ 2.2
COMMD1-208ENST00000472729 TRPM2O94759 1503 aa28.82■■■□□ 2.2
COMMD1-208ENST00000472729 SPHKAPQ2M3C7 1700 aa28.82■■■□□ 2.2
COMMD1-208ENST00000472729 VGFO15240 615 aaPredicted RBP28.8■■■□□ 2.2
COMMD1-208ENST00000472729 NKTRP30414 1462 aaKnown RBP28.79■■■□□ 2.2
COMMD1-208ENST00000472729 STRCP1A6NGW2 1772 aa28.78■■■□□ 2.2
COMMD1-208ENST00000472729 MSH6P52701 1360 aa28.78■■■□□ 2.2
COMMD1-208ENST00000472729 PIK3R4Q99570 1358 aa28.78■■■□□ 2.2
COMMD1-208ENST00000472729 DISP3Q9P2K9 1392 aa28.78■■■□□ 2.2
COMMD1-208ENST00000472729 RPGRIP1LQ68CZ1 1315 aa28.76■■■□□ 2.19
COMMD1-208ENST00000472729 AMOTL2Q9Y2J4 779 aa28.76■■■□□ 2.19
COMMD1-208ENST00000472729 ADAMTS13Q76LX8 1427 aa28.76■■■□□ 2.19
COMMD1-208ENST00000472729 MYO5BQ9ULV0 1848 aa28.75■■■□□ 2.19
COMMD1-208ENST00000472729 CCDC144AA2RUR9 1427 aa28.75■■■□□ 2.19
COMMD1-208ENST00000472729 CLTCL1P53675 1640 aa28.72■■■□□ 2.19
COMMD1-208ENST00000472729 DIP2AQ14689 1571 aa28.72■■■□□ 2.19
COMMD1-208ENST00000472729 RGL3Q3MIN7 710 aa28.69■■■□□ 2.18
COMMD1-208ENST00000472729 RAB3GAP2Q9H2M9 1393 aa28.69■■■□□ 2.18
COMMD1-208ENST00000472729 NWD1Q149M9 1564 aa28.69■■■□□ 2.18
COMMD1-208ENST00000472729 ATF3P18847 181 aa28.68■■■□□ 2.18
COMMD1-208ENST00000472729 NCOA3Q9Y6Q9 1424 aa28.67■■■□□ 2.18
COMMD1-208ENST00000472729 C19orf44Q9H6X5 657 aa28.66■■■□□ 2.18
COMMD1-208ENST00000472729 SLAIN2Q9P270 581 aa28.66■■■□□ 2.18
COMMD1-208ENST00000472729 CADPS2Q86UW7 1296 aa28.64■■■□□ 2.18
COMMD1-208ENST00000472729 FAM135BQ49AJ0 1406 aa28.63■■■□□ 2.17
COMMD1-208ENST00000472729 NEXMIFQ5QGS0 1516 aa28.62■■■□□ 2.17
COMMD1-208ENST00000472729 SETBP1Q9Y6X0 1596 aa28.62■■■□□ 2.17
COMMD1-208ENST00000472729 METP08581 1390 aa28.62■■■□□ 2.17
COMMD1-208ENST00000472729 KIF1BO60333 1816 aa28.61■■■□□ 2.17
COMMD1-208ENST00000472729 ALKQ9UM73 1620 aa28.61■■■□□ 2.17
COMMD1-208ENST00000472729 CHD2O14647 1828 aaKnown RBP28.57■■■□□ 2.16
COMMD1-208ENST00000472729 HRCP23327 699 aa28.57■■■□□ 2.16
COMMD1-208ENST00000472729 PTPRUQ92729 1446 aa28.57■■■□□ 2.16
COMMD1-208ENST00000472729 ANKRD30BQ9BXX2 1392 aa28.55■■■□□ 2.16
COMMD1-208ENST00000472729 PHF23Q9BUL5 403 aaPredicted RBP28.54■■■□□ 2.16
COMMD1-208ENST00000472729 XIRP1Q702N8 1843 aaKnown RBP28.51■■■□□ 2.15
COMMD1-208ENST00000472729 ADGRF5Q8IZF2 1346 aa28.49■■■□□ 2.15
COMMD1-208ENST00000472729 NRXN3Q9Y4C0 1643 aa28.48■■■□□ 2.15
COMMD1-208ENST00000472729 SPATA31E1Q6ZUB1 1445 aa28.48■■■□□ 2.15
COMMD1-208ENST00000472729 STK26Q9P289 416 aa28.43■■■□□ 2.14
COMMD1-208ENST00000472729 DCCP43146 1447 aa28.43■■■□□ 2.14
COMMD1-208ENST00000472729 ROBO1Q9Y6N7 1651 aa28.41■■■□□ 2.14
COMMD1-208ENST00000472729 PTCH1Q13635 1447 aa28.39■■■□□ 2.14
COMMD1-208ENST00000472729 ROBO2Q9HCK4 1378 aa28.38■■■□□ 2.13
COMMD1-208ENST00000472729 XRN1Q8IZH2 1706 aaKnown RBP28.38■■■□□ 2.13
COMMD1-208ENST00000472729 ADGRL3Q9HAR2 1447 aa28.38■■■□□ 2.13
COMMD1-208ENST00000472729 ILDR2Q71H61 639 aa28.38■■■□□ 2.13
COMMD1-208ENST00000472729 TMEM132EQ6IEE7 984 aa28.37■■■□□ 2.13
COMMD1-208ENST00000472729 MED1Q15648 1581 aaPredicted RBP28.37■■■□□ 2.13
COMMD1-208ENST00000472729 BRINP3Q76B58 766 aa28.36■■■□□ 2.13
COMMD1-208ENST00000472729 PPLO60437 1756 aa28.35■■■□□ 2.13
COMMD1-208ENST00000472729 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.35■■■□□ 2.13
COMMD1-208ENST00000472729 KDM2AQ9Y2K7 1162 aa28.34■■■□□ 2.13
COMMD1-208ENST00000472729 JCADQ9P266 1359 aa28.34■■■□□ 2.13
COMMD1-208ENST00000472729 DCAF11Q8TEB1 546 aa28.32■■■□□ 2.12
COMMD1-208ENST00000472729 C14orf93Q9H972 538 aaKnown RBP28.32■■■□□ 2.12
COMMD1-208ENST00000472729 PIK3C2GO75747 1445 aa28.32■■■□□ 2.12
COMMD1-208ENST00000472729 STAC3Q96MF2 364 aa28.31■■■□□ 2.12
COMMD1-208ENST00000472729 LRPPRCP42704 1394 aaKnown RBP28.3■■■□□ 2.12
COMMD1-208ENST00000472729 CFAP70Q5T0N1 1121 aa28.3■■■□□ 2.12
COMMD1-208ENST00000472729 MST1RQ04912 1400 aa28.29■■■□□ 2.12
COMMD1-208ENST00000472729 DHX57Q6P158 1386 aaKnown RBP28.29■■■□□ 2.12
COMMD1-208ENST00000472729 ABCC11Q96J66 1382 aa28.28■■■□□ 2.12
COMMD1-208ENST00000472729 WAPLQ7Z5K2 1190 aa28.27■■■□□ 2.12
COMMD1-208ENST00000472729 PRAG1Q86YV5 1406 aa28.26■■■□□ 2.12
COMMD1-208ENST00000472729 MYOM2P54296 1465 aa28.26■■■□□ 2.11
COMMD1-208ENST00000472729 MEX3CQ5U5Q3 659 aaKnown RBP28.25■■■□□ 2.11
COMMD1-208ENST00000472729 PHLPP1O60346 1717 aa28.24■■■□□ 2.11
COMMD1-208ENST00000472729 LRRC59Q96AG4 307 aaKnown RBP28.24■■■□□ 2.11
COMMD1-208ENST00000472729 SPATA31A6Q5VVP1 1343 aa28.23■■■□□ 2.11
COMMD1-208ENST00000472729 SOCS7O14512 581 aa28.23■■■□□ 2.11
COMMD1-208ENST00000472729 YTHDC2Q9H6S0 1430 aaKnown RBP28.23■■■□□ 2.11
COMMD1-208ENST00000472729 C1orf167Q5SNV9 1468 aa28.21■■■□□ 2.11
COMMD1-208ENST00000472729 ESCO1Q5FWF5 840 aa28.21■■■□□ 2.11
COMMD1-208ENST00000472729 SIRT1Q96EB6 747 aa28.21■■■□□ 2.11
COMMD1-208ENST00000472729 POGKQ9P215 609 aa28.21■■■□□ 2.11
COMMD1-208ENST00000472729 ASXL1Q8IXJ9 1541 aa28.21■■■□□ 2.11
COMMD1-208ENST00000472729 TECPR2O15040 1411 aa28.2■■■□□ 2.11
COMMD1-208ENST00000472729 SETD1AO15047 1707 aaKnown RBP28.2■■■□□ 2.1
COMMD1-208ENST00000472729 ORAI2Q96SN7 254 aa28.19■■■□□ 2.1
COMMD1-208ENST00000472729 NRXN1Q9ULB1 1477 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms