RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 CROCC2H7BZ55 1655 aa21.95■■□□□ 1.1
SMURF1-203ENST00000472627 PPP1R15AO75807 674 aaPredicted RBP21.93■■□□□ 1.1
SMURF1-203ENST00000472627 C14orf37Q86TY3 774 aa21.93■■□□□ 1.1
SMURF1-203ENST00000472627 ABCC5O15440 1437 aa21.92■■□□□ 1.1
SMURF1-203ENST00000472627 NCOA3Q9Y6Q9 1424 aa21.91■■□□□ 1.1
SMURF1-203ENST00000472627 ANKRD30AQ9BXX3 1397 aa21.91■■□□□ 1.1
SMURF1-203ENST00000472627 NOS1P29475 1434 aa21.9■■□□□ 1.1
SMURF1-203ENST00000472627 KANK4Q5T7N3 995 aaPredicted RBP21.9■■□□□ 1.1
SMURF1-203ENST00000472627 UPF1Q92900 1129 aaKnown RBP eCLIP21.9■■□□□ 1.1
SMURF1-203ENST00000472627 PLEKHG1Q9ULL1 1385 aa21.89■■□□□ 1.1
SMURF1-203ENST00000472627 COL16A1Q07092 1604 aaPredicted RBP21.89■■□□□ 1.09
SMURF1-203ENST00000472627 TRIM52Q96A61 297 aa21.89■■□□□ 1.09
SMURF1-203ENST00000472627 DAPK1P53355 1430 aa21.89■■□□□ 1.09
SMURF1-203ENST00000472627 CADPS2Q86UW7 1296 aa21.88■■□□□ 1.09
SMURF1-203ENST00000472627 PTPN23Q9H3S7 1636 aa21.87■■□□□ 1.09
SMURF1-203ENST00000472627 ATF3P18847 181 aa21.86■■□□□ 1.09
SMURF1-203ENST00000472627 RXRBP28702 533 aa21.86■■□□□ 1.09
SMURF1-203ENST00000472627 RPRD2Q5VT52 1461 aaKnown RBP21.85■■□□□ 1.09
SMURF1-203ENST00000472627 LRP6O75581 1613 aa21.84■■□□□ 1.09
SMURF1-203ENST00000472627 APLP2Q06481 763 aa21.84■■□□□ 1.09
SMURF1-203ENST00000472627 CHD2O14647 1828 aaKnown RBP21.83■■□□□ 1.09
SMURF1-203ENST00000472627 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.83■■□□□ 1.09
SMURF1-203ENST00000472627 TBX22Q9Y458 520 aa21.83■■□□□ 1.09
SMURF1-203ENST00000472627 ZFYVE9O95405 1425 aa21.82■■□□□ 1.08
SMURF1-203ENST00000472627 RIMS2Q9UQ26 1411 aa21.82■■□□□ 1.08
SMURF1-203ENST00000472627 AHDC1Q5TGY3 1603 aaPredicted RBP21.82■■□□□ 1.08
SMURF1-203ENST00000472627 C19orf44Q9H6X5 657 aa21.82■■□□□ 1.08
SMURF1-203ENST00000472627 SHPRHQ149N8 1683 aa21.82■■□□□ 1.08
SMURF1-203ENST00000472627 CDK12Q9NYV4 1490 aaPredicted RBP21.81■■□□□ 1.08
SMURF1-203ENST00000472627 CHIC2Q9UKJ5 165 aa21.8■■□□□ 1.08
SMURF1-203ENST00000472627 PIK3R4Q99570 1358 aa21.78■■□□□ 1.08
SMURF1-203ENST00000472627 DIP2AQ14689 1571 aa21.78■■□□□ 1.08
SMURF1-203ENST00000472627 NUTM2BA6NNL0 878 aaPredicted RBP21.75■■□□□ 1.07
SMURF1-203ENST00000472627 NUTM2EB1AL46 878 aaPredicted RBP21.75■■□□□ 1.07
SMURF1-203ENST00000472627 NUTM2AQ8IVF1 878 aaPredicted RBP21.75■■□□□ 1.07
SMURF1-203ENST00000472627 GCC2Q8IWJ2 1684 aa21.75■■□□□ 1.07
SMURF1-203ENST00000472627 CHGAP10645 457 aaKnown RBP21.74■■□□□ 1.07
SMURF1-203ENST00000472627 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.74■■□□□ 1.07
SMURF1-203ENST00000472627 TMEM131LA2VDJ0 1609 aa21.73■■□□□ 1.07
SMURF1-203ENST00000472627 FOXD1Q16676 465 aa21.71■■□□□ 1.07
SMURF1-203ENST00000472627 BRINP3Q76B58 766 aa21.71■■□□□ 1.07
SMURF1-203ENST00000472627 AFF2P51816 1311 aa21.71■■□□□ 1.07
SMURF1-203ENST00000472627 DCCP43146 1447 aa21.71■■□□□ 1.07
SMURF1-203ENST00000472627 ANKRD50Q9ULJ7 1429 aa21.71■■□□□ 1.07
SMURF1-203ENST00000472627 ADGRL2O95490 1459 aa21.71■■□□□ 1.07
SMURF1-203ENST00000472627 MYO5BQ9ULV0 1848 aa21.7■■□□□ 1.06
SMURF1-203ENST00000472627 TRPM2O94759 1503 aa21.7■■□□□ 1.06
SMURF1-203ENST00000472627 ADAMTS13Q76LX8 1427 aa21.69■■□□□ 1.06
SMURF1-203ENST00000472627 LRRC59Q96AG4 307 aaKnown RBP21.67■■□□□ 1.06
SMURF1-203ENST00000472627 SETD5Q9C0A6 1442 aa21.66■■□□□ 1.06
SMURF1-203ENST00000472627 RBM6P78332 1123 aaKnown RBP21.66■■□□□ 1.06
SMURF1-203ENST00000472627 AMOTL2Q9Y2J4 779 aa21.66■■□□□ 1.06
SMURF1-203ENST00000472627 ASXL1Q8IXJ9 1541 aa21.65■■□□□ 1.06
SMURF1-203ENST00000472627 NUTM2DQ5VT03 806 aaPredicted RBP21.64■■□□□ 1.05
SMURF1-203ENST00000472627 C8orf37Q96NL8 207 aa21.64■■□□□ 1.05
SMURF1-203ENST00000472627 NGLY1Q96IV0 654 aa21.63■■□□□ 1.05
SMURF1-203ENST00000472627 QTRT2Q9H974 415 aaKnown RBP21.62■■□□□ 1.05
SMURF1-203ENST00000472627 RGS12O14924 1447 aa21.62■■□□□ 1.05
SMURF1-203ENST00000472627 FAM50AQ14320 339 aaKnown RBP21.61■■□□□ 1.05
SMURF1-203ENST00000472627 ATAD2Q6PL18 1390 aa21.6■■□□□ 1.05
SMURF1-203ENST00000472627 NHSL1Q5SYE7 1610 aa21.58■■□□□ 1.05
SMURF1-203ENST00000472627 MST1RQ04912 1400 aa21.58■■□□□ 1.05
SMURF1-203ENST00000472627 LOC105371045A0A1W2PR82 267 aa21.58■■□□□ 1.05
SMURF1-203ENST00000472627 UNC13BO14795 1591 aa21.57■■□□□ 1.04
SMURF1-203ENST00000472627 PTPRUQ92729 1446 aa21.55■■□□□ 1.04
SMURF1-203ENST00000472627 PNPLA6Q8IY17 1366 aa21.55■■□□□ 1.04
SMURF1-203ENST00000472627 ZRANB1Q9UGI0 708 aa21.54■■□□□ 1.04
SMURF1-203ENST00000472627 E9PCH4 1651 aa21.53■■□□□ 1.04
SMURF1-203ENST00000472627 XRN1Q8IZH2 1706 aaKnown RBP21.53■■□□□ 1.04
SMURF1-203ENST00000472627 ADAMTS2O95450 1211 aa21.52■■□□□ 1.04
SMURF1-203ENST00000472627 ADGRL3Q9HAR2 1447 aa21.52■■□□□ 1.04
SMURF1-203ENST00000472627 SETBP1Q9Y6X0 1596 aa21.52■■□□□ 1.04
SMURF1-203ENST00000472627 TRPC5Q9UL62 973 aaPredicted RBP21.5■■□□□ 1.03
SMURF1-203ENST00000472627 IQGAP3Q86VI3 1631 aa21.5■■□□□ 1.03
SMURF1-203ENST00000472627 ZNF326Q5BKZ1 582 aaKnown RBP21.49■■□□□ 1.03
SMURF1-203ENST00000472627 USP21Q9UK80 565 aa21.49■■□□□ 1.03
SMURF1-203ENST00000472627 SRCAPQ6ZRS2 3230 aa21.47■■□□□ 1.03
SMURF1-203ENST00000472627 NUP155O75694 1391 aa21.47■■□□□ 1.03
SMURF1-203ENST00000472627 CCDC125Q86Z20 511 aa21.45■■□□□ 1.02
SMURF1-203ENST00000472627 DDX17Q92841 729 aaKnown RBP21.45■■□□□ 1.02
SMURF1-203ENST00000472627 ROCK1Q13464 1354 aa21.45■■□□□ 1.02
SMURF1-203ENST00000472627 PTCH1Q13635 1447 aa21.45■■□□□ 1.02
SMURF1-203ENST00000472627 NRXN3Q9Y4C0 1643 aa21.44■■□□□ 1.02
SMURF1-203ENST00000472627 METP08581 1390 aa21.44■■□□□ 1.02
SMURF1-203ENST00000472627 C1orf167Q5SNV9 1468 aa21.42■■□□□ 1.02
SMURF1-203ENST00000472627 FNBP4Q8N3X1 1017 aaPredicted RBP21.4■■□□□ 1.02
SMURF1-203ENST00000472627 NALCNQ8IZF0 1738 aa21.4■■□□□ 1.02
SMURF1-203ENST00000472627 SOS2Q07890 1332 aaPredicted RBP21.39■■□□□ 1.01
SMURF1-203ENST00000472627 LAMC1P11047 1609 aa21.38■■□□□ 1.01
SMURF1-203ENST00000472627 ATRNO75882 1429 aa21.37■■□□□ 1.01
SMURF1-203ENST00000472627 SPHKAPQ2M3C7 1700 aa21.36■■□□□ 1.01
SMURF1-203ENST00000472627 NPHP3Q7Z494 1330 aa21.32■■□□□ 1
SMURF1-203ENST00000472627 ORAI2Q96SN7 254 aa21.32■■□□□ 1
SMURF1-203ENST00000472627 COL22A1Q8NFW1 1626 aaPredicted RBP21.32■■□□□ 1
SMURF1-203ENST00000472627 NEXMIFQ5QGS0 1516 aa21.3■■□□□ 1
SMURF1-203ENST00000472627 VGFO15240 615 aaPredicted RBP21.29■■□□□ 1
SMURF1-203ENST00000472627 HFM1A2PYH4 1435 aa21.29■■□□□ 1
SMURF1-203ENST00000472627 MYOM2P54296 1465 aa21.28■■□□□ 1
SMURF1-203ENST00000472627 GJD4Q96KN9 370 aaPredicted RBP21.28■■□□□ 1
SMURF1-203ENST00000472627 LRPPRCP42704 1394 aaKnown RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms