RNA–Protein interactions for RNA: ENST00000472390.1

RHBDF1-207, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-207ENST00000472390 RPRD2Q5VT52 1461 aaKnown RBP29.31■■■□□ 2.28
RHBDF1-207ENST00000472390 ZFYVE9O95405 1425 aa29.31■■■□□ 2.28
RHBDF1-207ENST00000472390 PHF23Q9BUL5 403 aaPredicted RBP29.3■■■□□ 2.28
RHBDF1-207ENST00000472390 ROBO1Q9Y6N7 1651 aa29.28■■■□□ 2.28
RHBDF1-207ENST00000472390 KCNA6P17658 529 aa29.28■■■□□ 2.28
RHBDF1-207ENST00000472390 BCANQ96GW7 911 aa29.27■■■□□ 2.28
RHBDF1-207ENST00000472390 RIMS2Q9UQ26 1411 aa29.27■■■□□ 2.28
RHBDF1-207ENST00000472390 PROSER2Q86WR7 435 aaPredicted RBP29.26■■■□□ 2.27
RHBDF1-207ENST00000472390 SLC52A1Q9NWF4 448 aa29.26■■■□□ 2.27
RHBDF1-207ENST00000472390 IQGAP3Q86VI3 1631 aa29.25■■■□□ 2.27
RHBDF1-207ENST00000472390 ITGAEP38570 1179 aa29.25■■■□□ 2.27
RHBDF1-207ENST00000472390 NUTM2DQ5VT03 806 aaPredicted RBP29.24■■■□□ 2.27
RHBDF1-207ENST00000472390 NKTRP30414 1462 aaKnown RBP29.23■■■□□ 2.27
RHBDF1-207ENST00000472390 CHD2O14647 1828 aaKnown RBP29.22■■■□□ 2.27
RHBDF1-207ENST00000472390 CHGAP10645 457 aaKnown RBP29.22■■■□□ 2.27
RHBDF1-207ENST00000472390 PLEKHG1Q9ULL1 1385 aa29.21■■■□□ 2.27
RHBDF1-207ENST00000472390 FAM135BQ49AJ0 1406 aa29.2■■■□□ 2.26
RHBDF1-207ENST00000472390 ROCK1Q13464 1354 aa29.17■■■□□ 2.26
RHBDF1-207ENST00000472390 PPP1R15AO75807 674 aaPredicted RBP29.17■■■□□ 2.26
RHBDF1-207ENST00000472390 RGS17Q9UGC6 210 aaPredicted RBP29.17■■■□□ 2.26
RHBDF1-207ENST00000472390 ADAMTS13Q76LX8 1427 aa29.14■■■□□ 2.26
RHBDF1-207ENST00000472390 NUP155O75694 1391 aa29.12■■■□□ 2.25
RHBDF1-207ENST00000472390 MSH6P52701 1360 aa29.11■■■□□ 2.25
RHBDF1-207ENST00000472390 PHLPP1O60346 1717 aa29.1■■■□□ 2.25
RHBDF1-207ENST00000472390 SPHKAPQ2M3C7 1700 aa29.06■■■□□ 2.24
RHBDF1-207ENST00000472390 NRXN3Q9Y4C0 1643 aa29.04■■■□□ 2.24
RHBDF1-207ENST00000472390 PTPRUQ92729 1446 aa29.03■■■□□ 2.24
RHBDF1-207ENST00000472390 DIP2AQ14689 1571 aa29.03■■■□□ 2.24
RHBDF1-207ENST00000472390 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.03■■■□□ 2.24
RHBDF1-207ENST00000472390 TBX22Q9Y458 520 aa29.02■■■□□ 2.24
RHBDF1-207ENST00000472390 COL16A1Q07092 1604 aaPredicted RBP29.02■■■□□ 2.24
RHBDF1-207ENST00000472390 SLAIN2Q9P270 581 aa29.01■■■□□ 2.23
RHBDF1-207ENST00000472390 POTEAQ6S8J7 498 aa28.99■■■□□ 2.23
RHBDF1-207ENST00000472390 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.99■■■□□ 2.23
RHBDF1-207ENST00000472390 TRPM2O94759 1503 aa28.98■■■□□ 2.23
RHBDF1-207ENST00000472390 CLTCL1P53675 1640 aa28.98■■■□□ 2.23
RHBDF1-207ENST00000472390 C14orf37Q86TY3 774 aa28.97■■■□□ 2.23
RHBDF1-207ENST00000472390 HDGFP51858 240 aaKnown RBP28.96■■■□□ 2.23
RHBDF1-207ENST00000472390 SETD1AO15047 1707 aaKnown RBP28.96■■■□□ 2.23
RHBDF1-207ENST00000472390 XRN1Q8IZH2 1706 aaKnown RBP28.95■■■□□ 2.23
RHBDF1-207ENST00000472390 LRP6O75581 1613 aa28.92■■■□□ 2.22
RHBDF1-207ENST00000472390 AMOTL2Q9Y2J4 779 aa28.91■■■□□ 2.22
RHBDF1-207ENST00000472390 SETBP1Q9Y6X0 1596 aa28.91■■■□□ 2.22
RHBDF1-207ENST00000472390 PIK3R4Q99570 1358 aa28.88■■■□□ 2.21
RHBDF1-207ENST00000472390 JCADQ9P266 1359 aa28.88■■■□□ 2.21
RHBDF1-207ENST00000472390 RRBP1Q9P2E9 1410 aaKnown RBP28.88■■■□□ 2.21
RHBDF1-207ENST00000472390 NEXMIFQ5QGS0 1516 aa28.88■■■□□ 2.21
RHBDF1-207ENST00000472390 AHDC1Q5TGY3 1603 aaPredicted RBP28.87■■■□□ 2.21
RHBDF1-207ENST00000472390 ZNF326Q5BKZ1 582 aaKnown RBP28.87■■■□□ 2.21
RHBDF1-207ENST00000472390 NAIPQ13075 1403 aa28.86■■■□□ 2.21
RHBDF1-207ENST00000472390 NCOA3Q9Y6Q9 1424 aa28.86■■■□□ 2.21
RHBDF1-207ENST00000472390 METP08581 1390 aa28.86■■■□□ 2.21
RHBDF1-207ENST00000472390 ATF3P18847 181 aa28.82■■■□□ 2.2
RHBDF1-207ENST00000472390 C19orf44Q9H6X5 657 aa28.82■■■□□ 2.2
RHBDF1-207ENST00000472390 NALCNQ8IZF0 1738 aa28.81■■■□□ 2.2
RHBDF1-207ENST00000472390 SHPRHQ149N8 1683 aa28.81■■■□□ 2.2
RHBDF1-207ENST00000472390 KIF1BO60333 1816 aa28.8■■■□□ 2.2
RHBDF1-207ENST00000472390 CADPS2Q86UW7 1296 aa28.8■■■□□ 2.2
RHBDF1-207ENST00000472390 BRINP3Q76B58 766 aa28.79■■■□□ 2.2
RHBDF1-207ENST00000472390 ASXL1Q8IXJ9 1541 aa28.79■■■□□ 2.2
RHBDF1-207ENST00000472390 MST1RQ04912 1400 aa28.77■■■□□ 2.2
RHBDF1-207ENST00000472390 NHSL1Q5SYE7 1610 aa28.74■■■□□ 2.19
RHBDF1-207ENST00000472390 DDX17Q92841 729 aaKnown RBP28.73■■■□□ 2.19
RHBDF1-207ENST00000472390 DCCP43146 1447 aa28.72■■■□□ 2.19
RHBDF1-207ENST00000472390 ADGRL3Q9HAR2 1447 aa28.7■■■□□ 2.19
RHBDF1-207ENST00000472390 TRIM52Q96A61 297 aa28.7■■■□□ 2.18
RHBDF1-207ENST00000472390 NUTM2BA6NNL0 878 aaPredicted RBP28.69■■■□□ 2.18
RHBDF1-207ENST00000472390 NUTM2EB1AL46 878 aaPredicted RBP28.69■■■□□ 2.18
RHBDF1-207ENST00000472390 MEX3CQ5U5Q3 659 aaKnown RBP28.69■■■□□ 2.18
RHBDF1-207ENST00000472390 NUTM2AQ8IVF1 878 aaPredicted RBP28.69■■■□□ 2.18
RHBDF1-207ENST00000472390 HFM1A2PYH4 1435 aa28.69■■■□□ 2.18
RHBDF1-207ENST00000472390 SPATA31A6Q5VVP1 1343 aa28.69■■■□□ 2.18
RHBDF1-207ENST00000472390 PPLO60437 1756 aa28.65■■■□□ 2.18
RHBDF1-207ENST00000472390 FOXD1Q16676 465 aa28.65■■■□□ 2.18
RHBDF1-207ENST00000472390 ROBO2Q9HCK4 1378 aa28.62■■■□□ 2.17
RHBDF1-207ENST00000472390 SLC4A1APQ9BWU0 796 aaKnown RBP28.6■■■□□ 2.17
RHBDF1-207ENST00000472390 SETD5Q9C0A6 1442 aa28.6■■■□□ 2.17
RHBDF1-207ENST00000472390 PTCH1Q13635 1447 aa28.58■■■□□ 2.17
RHBDF1-207ENST00000472390 C1orf167Q5SNV9 1468 aa28.57■■■□□ 2.16
RHBDF1-207ENST00000472390 PNPLA6Q8IY17 1366 aa28.55■■■□□ 2.16
RHBDF1-207ENST00000472390 AFF2P51816 1311 aa28.53■■■□□ 2.16
RHBDF1-207ENST00000472390 ZNF772Q68DY9 489 aaPredicted RBP28.52■■■□□ 2.16
RHBDF1-207ENST00000472390 ORAI2Q96SN7 254 aa28.51■■■□□ 2.15
RHBDF1-207ENST00000472390 VGFO15240 615 aaPredicted RBP28.5■■■□□ 2.15
RHBDF1-207ENST00000472390 IFT172Q9UG01 1749 aa28.49■■■□□ 2.15
RHBDF1-207ENST00000472390 LAMC1P11047 1609 aa28.49■■■□□ 2.15
RHBDF1-207ENST00000472390 ADGRF5Q8IZF2 1346 aa28.48■■■□□ 2.15
RHBDF1-207ENST00000472390 PRAG1Q86YV5 1406 aa28.47■■■□□ 2.15
RHBDF1-207ENST00000472390 C8orf37Q96NL8 207 aa28.47■■■□□ 2.15
RHBDF1-207ENST00000472390 LRRC59Q96AG4 307 aaKnown RBP28.46■■■□□ 2.15
RHBDF1-207ENST00000472390 RPGRIP1LQ68CZ1 1315 aa28.44■■■□□ 2.14
RHBDF1-207ENST00000472390 RGL3Q3MIN7 710 aa28.44■■■□□ 2.14
RHBDF1-207ENST00000472390 ADAMTS2O95450 1211 aa28.43■■■□□ 2.14
RHBDF1-207ENST00000472390 RXRBP28702 533 aa28.43■■■□□ 2.14
RHBDF1-207ENST00000472390 SPATA31E1Q6ZUB1 1445 aa28.43■■■□□ 2.14
RHBDF1-207ENST00000472390 UPF1Q92900 1129 aaKnown RBP eCLIP28.42■■■□□ 2.14
RHBDF1-207ENST00000472390 CCDC144AA2RUR9 1427 aa28.42■■■□□ 2.14
RHBDF1-207ENST00000472390 RGS12O14924 1447 aa28.42■■■□□ 2.14
RHBDF1-207ENST00000472390 CDC42BPGQ6DT37 1551 aa28.41■■■□□ 2.14
RHBDF1-207ENST00000472390 STK26Q9P289 416 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms