RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 EYA1Q99502 592 aa13.41□□□□□ -0.26
SCAF4-205ENST00000472318 RIMBP3CA6NJZ7 1639 aa13.4□□□□□ -0.26
SCAF4-205ENST00000472318 RIMBP3BA6NNM3 1639 aa13.4□□□□□ -0.26
SCAF4-205ENST00000472318 RIMBP3Q9UFD9 1639 aa13.4□□□□□ -0.26
SCAF4-205ENST00000472318 VSIG10Q8N0Z9 540 aa13.4□□□□□ -0.26
SCAF4-205ENST00000472318 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
SCAF4-205ENST00000472318 FCHSD2O94868 740 aa13.38□□□□□ -0.27
SCAF4-205ENST00000472318 PPP4CP60510 307 aa13.38□□□□□ -0.27
SCAF4-205ENST00000472318 A0A0G2JS52 829 aa13.37□□□□□ -0.27
SCAF4-205ENST00000472318 SMYD5Q6GMV2 418 aa13.37□□□□□ -0.27
SCAF4-205ENST00000472318 WDR62O43379 1518 aa13.37□□□□□ -0.27
SCAF4-205ENST00000472318 BAZ1BQ9UIG0 1483 aaKnown RBP13.36□□□□□ -0.27
SCAF4-205ENST00000472318 ADGRG1Q9Y653 693 aa13.36□□□□□ -0.27
SCAF4-205ENST00000472318 HDGFP51858 240 aaKnown RBP13.35□□□□□ -0.27
SCAF4-205ENST00000472318 SWT1Q5T5J6 900 aaKnown RBP13.35□□□□□ -0.27
SCAF4-205ENST00000472318 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
SCAF4-205ENST00000472318 RNF40O75150 1001 aa13.32□□□□□ -0.28
SCAF4-205ENST00000472318 CYB5RLQ6IPT4 315 aa13.32□□□□□ -0.28
SCAF4-205ENST00000472318 SMARCA4P51532 1647 aa13.31□□□□□ -0.28
SCAF4-205ENST00000472318 ARHGEF11O15085 1522 aa13.31□□□□□ -0.28
SCAF4-205ENST00000472318 GPR37O15354 613 aa13.31□□□□□ -0.28
SCAF4-205ENST00000472318 KCNC4Q03721 635 aa13.31□□□□□ -0.28
SCAF4-205ENST00000472318 HIC1Q14526 733 aa13.31□□□□□ -0.28
SCAF4-205ENST00000472318 SLF2Q8IX21 1173 aa13.31□□□□□ -0.28
SCAF4-205ENST00000472318 RBM46Q8TBY0 533 aaKnown RBP13.31□□□□□ -0.28
SCAF4-205ENST00000472318 DNAJB2P25686 324 aa13.3□□□□□ -0.28
SCAF4-205ENST00000472318 NECTIN2Q92692 538 aa13.3□□□□□ -0.28
SCAF4-205ENST00000472318 RGS20O76081 388 aa13.28□□□□□ -0.28
SCAF4-205ENST00000472318 TMEM134Q9H6X4 195 aa13.28□□□□□ -0.28
SCAF4-205ENST00000472318 CADPSQ9ULU8 1353 aa13.28□□□□□ -0.28
SCAF4-205ENST00000472318 APLP1P51693 650 aa13.27□□□□□ -0.29
SCAF4-205ENST00000472318 FAM161AQ3B820 660 aa13.27□□□□□ -0.29
SCAF4-205ENST00000472318 TJAP1Q5JTD0 557 aa13.26□□□□□ -0.29
SCAF4-205ENST00000472318 SLC4A3P48751 1232 aa13.25□□□□□ -0.29
SCAF4-205ENST00000472318 RCCD1A6NED2 376 aa13.24□□□□□ -0.29
SCAF4-205ENST00000472318 GNPATO15228 680 aa13.23□□□□□ -0.29
SCAF4-205ENST00000472318 PXYLP1Q8TE99 480 aa13.23□□□□□ -0.29
SCAF4-205ENST00000472318 MTRQ99707 1265 aa13.23□□□□□ -0.29
SCAF4-205ENST00000472318 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.22□□□□□ -0.29
SCAF4-205ENST00000472318 OATP04181 439 aa13.21□□□□□ -0.29
SCAF4-205ENST00000472318 FECHP22830 423 aa13.21□□□□□ -0.29
SCAF4-205ENST00000472318 IL21Q9HBE4 155 aa13.21□□□□□ -0.29
SCAF4-205ENST00000472318 METTL3Q86U44 580 aaKnown RBP13.2□□□□□ -0.3
SCAF4-205ENST00000472318 GPIHBP1Q8IV16 184 aa13.19□□□□□ -0.3
SCAF4-205ENST00000472318 PEG3Q9GZU2 1588 aa13.19□□□□□ -0.3
SCAF4-205ENST00000472318 PRR14Q9BWN1 585 aa13.18□□□□□ -0.3
SCAF4-205ENST00000472318 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
SCAF4-205ENST00000472318 ARAP1Q96P48 1450 aa13.16□□□□□ -0.3
SCAF4-205ENST00000472318 ZNF516Q92618 1163 aa13.13□□□□□ -0.31
SCAF4-205ENST00000472318 FANCD2Q9BXW9 1451 aa13.11□□□□□ -0.31
SCAF4-205ENST00000472318 TULP1O00294 542 aaPredicted RBP13.11□□□□□ -0.31
SCAF4-205ENST00000472318 CFHP08603 1231 aa13.1□□□□□ -0.31
SCAF4-205ENST00000472318 SLC10A3P09131 477 aa13.1□□□□□ -0.31
SCAF4-205ENST00000472318 COPS2P61201 443 aa13.1□□□□□ -0.31
SCAF4-205ENST00000472318 PCDHB3Q9Y5E6 796 aa13.1□□□□□ -0.31
SCAF4-205ENST00000472318 KMT5BQ4FZB7 885 aa13.09□□□□□ -0.31
SCAF4-205ENST00000472318 ACTN4O43707 911 aaKnown RBP13.08□□□□□ -0.32
SCAF4-205ENST00000472318 URB2Q14146 1524 aaKnown RBP13.08□□□□□ -0.32
SCAF4-205ENST00000472318 ZPR1O75312 459 aa13.06□□□□□ -0.32
SCAF4-205ENST00000472318 BLOC1S3Q6QNY0 202 aa13.06□□□□□ -0.32
SCAF4-205ENST00000472318 ZNF608Q9ULD9 1512 aaPredicted RBP13.06□□□□□ -0.32
SCAF4-205ENST00000472318 MROH2BQ7Z745 1585 aa13.06□□□□□ -0.32
SCAF4-205ENST00000472318 PPP1R18Q6NYC8 613 aa13.05□□□□□ -0.32
SCAF4-205ENST00000472318 NKX2-3Q8TAU0 364 aa13.05□□□□□ -0.32
SCAF4-205ENST00000472318 PHOX2BQ99453 314 aa13.05□□□□□ -0.32
SCAF4-205ENST00000472318 DAXXQ9UER7 740 aaPredicted RBP13.04□□□□□ -0.32
SCAF4-205ENST00000472318 MAP2K5Q13163 448 aa13.03□□□□□ -0.32
SCAF4-205ENST00000472318 NLRP7Q8WX94 980 aa13.02□□□□□ -0.33
SCAF4-205ENST00000472318 RSPH4AQ5TD94 716 aa13□□□□□ -0.33
SCAF4-205ENST00000472318 EIF4ENIF1Q9NRA8 985 aaKnown RBP13□□□□□ -0.33
SCAF4-205ENST00000472318 IRX2Q9BZI1 471 aaPredicted RBP12.99□□□□□ -0.33
SCAF4-205ENST00000472318 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.98□□□□□ -0.33
SCAF4-205ENST00000472318 TLL1O43897 1013 aa12.97□□□□□ -0.33
SCAF4-205ENST00000472318 RSF1Q96T23 1441 aaPredicted RBP12.96□□□□□ -0.33
SCAF4-205ENST00000472318 IRF6O14896 467 aa12.96□□□□□ -0.33
SCAF4-205ENST00000472318 GGCXP38435 758 aa12.96□□□□□ -0.33
SCAF4-205ENST00000472318 SULF1Q8IWU6 871 aa12.96□□□□□ -0.33
SCAF4-205ENST00000472318 CFTRP13569 1480 aa12.96□□□□□ -0.34
SCAF4-205ENST00000472318 DDX11L8A8MPP1 907 aa12.95□□□□□ -0.34
SCAF4-205ENST00000472318 RDH13Q8NBN7 331 aa12.95□□□□□ -0.34
SCAF4-205ENST00000472318 TMUB1Q9BVT8 246 aa12.95□□□□□ -0.34
SCAF4-205ENST00000472318 IFT140Q96RY7 1462 aa12.95□□□□□ -0.34
SCAF4-205ENST00000472318 MINK1Q8N4C8 1332 aaPredicted RBP12.94□□□□□ -0.34
SCAF4-205ENST00000472318 NR1I2O75469 434 aa12.94□□□□□ -0.34
SCAF4-205ENST00000472318 LMOD2Q6P5Q4 547 aa12.92□□□□□ -0.34
SCAF4-205ENST00000472318 PRKD2Q9BZL6 878 aa12.92□□□□□ -0.34
SCAF4-205ENST00000472318 V9GY48 417 aaPredicted RBP12.92□□□□□ -0.34
SCAF4-205ENST00000472318 CCDC102AQ96A19 550 aa12.91□□□□□ -0.34
SCAF4-205ENST00000472318 ADH1BP00325 375 aa12.9□□□□□ -0.34
SCAF4-205ENST00000472318 GCGRP47871 477 aa12.9□□□□□ -0.34
SCAF4-205ENST00000472318 PUS10Q3MIT2 529 aaKnown RBP12.9□□□□□ -0.34
SCAF4-205ENST00000472318 FUT2Q10981 343 aa12.89□□□□□ -0.35
SCAF4-205ENST00000472318 SCUBE3Q8IX30 993 aa12.89□□□□□ -0.35
SCAF4-205ENST00000472318 RNF223E7ERA6 249 aa12.88□□□□□ -0.35
SCAF4-205ENST00000472318 MORN1Q5T089 497 aa12.88□□□□□ -0.35
SCAF4-205ENST00000472318 S1PR4O95977 384 aa12.86□□□□□ -0.35
SCAF4-205ENST00000472318 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
SCAF4-205ENST00000472318 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.354e-11■■■■■ 32.7
SCAF4-205ENST00000472318 CD46P15529 392 aa12.85□□□□□ -0.35
SCAF4-205ENST00000472318 ATP6V1AP38606 617 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms