RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 TMEM94Q12767 1356 aa15.14■□□□□ 0.01
NUDCD3-205ENST00000472246 ROCK1Q13464 1354 aa15.14■□□□□ 0.01
NUDCD3-205ENST00000472246 ZFYVE9O95405 1425 aa15.14■□□□□ 0.01
NUDCD3-205ENST00000472246 NWD1Q149M9 1564 aa15.14■□□□□ 0.01
NUDCD3-205ENST00000472246 ITGAEP38570 1179 aa15.13■□□□□ 0.01
NUDCD3-205ENST00000472246 RBM33Q96EV2 1170 aaKnown RBP15.13■□□□□ 0.01
NUDCD3-205ENST00000472246 RIMS2Q9UQ26 1411 aa15.12■□□□□ 0.01
NUDCD3-205ENST00000472246 KCNA6P17658 529 aa15.12■□□□□ 0.01
NUDCD3-205ENST00000472246 BCANQ96GW7 911 aa15.12■□□□□ 0.01
NUDCD3-205ENST00000472246 NKTRP30414 1462 aaKnown RBP15.11■□□□□ 0.01
NUDCD3-205ENST00000472246 PLEKHG1Q9ULL1 1385 aa15.1■□□□□ 0.01
NUDCD3-205ENST00000472246 PPP1R15AO75807 674 aaPredicted RBP15.09■□□□□ 0.01
NUDCD3-205ENST00000472246 CHGAP10645 457 aaKnown RBP15.09■□□□□ 0.01
NUDCD3-205ENST00000472246 PROSER2Q86WR7 435 aaPredicted RBP15.09■□□□□ 0.01
NUDCD3-205ENST00000472246 NUP155O75694 1391 aa15.09■□□□□ 0.01
NUDCD3-205ENST00000472246 CHD2O14647 1828 aaKnown RBP15.08■□□□□ 0
NUDCD3-205ENST00000472246 ROBO1Q9Y6N7 1651 aa15.07■□□□□ 0
NUDCD3-205ENST00000472246 PHF23Q9BUL5 403 aaPredicted RBP15.07■□□□□ 0
NUDCD3-205ENST00000472246 FAM135BQ49AJ0 1406 aa15.07■□□□□ 0
NUDCD3-205ENST00000472246 NUTM2DQ5VT03 806 aaPredicted RBP15.06■□□□□ 0
NUDCD3-205ENST00000472246 ADAMTS13Q76LX8 1427 aa15.04■□□□□ -0
NUDCD3-205ENST00000472246 SPHKAPQ2M3C7 1700 aa15.03■□□□□ -0
NUDCD3-205ENST00000472246 MSH6P52701 1360 aa15.03■□□□□ -0
NUDCD3-205ENST00000472246 HDGFP51858 240 aaKnown RBP15.03■□□□□ -0
NUDCD3-205ENST00000472246 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.03■□□□□ -0
NUDCD3-205ENST00000472246 DIP2AQ14689 1571 aa15.02□□□□□ -0.01
NUDCD3-205ENST00000472246 TBX22Q9Y458 520 aa15.01□□□□□ -0.01
NUDCD3-205ENST00000472246 RRBP1Q9P2E9 1410 aaKnown RBP15□□□□□ -0.01
NUDCD3-205ENST00000472246 NRXN3Q9Y4C0 1643 aa14.99□□□□□ -0.01
NUDCD3-205ENST00000472246 TRPM2O94759 1503 aa14.98□□□□□ -0.01
NUDCD3-205ENST00000472246 RGS17Q9UGC6 210 aaPredicted RBP14.98□□□□□ -0.01
NUDCD3-205ENST00000472246 PHLPP1O60346 1717 aa14.97□□□□□ -0.01
NUDCD3-205ENST00000472246 CLTCL1P53675 1640 aa14.97□□□□□ -0.01
NUDCD3-205ENST00000472246 SLAIN2Q9P270 581 aa14.97□□□□□ -0.01
NUDCD3-205ENST00000472246 NAIPQ13075 1403 aa14.97□□□□□ -0.01
NUDCD3-205ENST00000472246 PTPRUQ92729 1446 aa14.97□□□□□ -0.01
NUDCD3-205ENST00000472246 C14orf37Q86TY3 774 aa14.96□□□□□ -0.01
NUDCD3-205ENST00000472246 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.96□□□□□ -0.01
NUDCD3-205ENST00000472246 PIK3R4Q99570 1358 aa14.96□□□□□ -0.02
NUDCD3-205ENST00000472246 SETBP1Q9Y6X0 1596 aa14.95□□□□□ -0.02
NUDCD3-205ENST00000472246 NCOA3Q9Y6Q9 1424 aa14.95□□□□□ -0.02
NUDCD3-205ENST00000472246 ZNF326Q5BKZ1 582 aaKnown RBP14.94□□□□□ -0.02
NUDCD3-205ENST00000472246 COL16A1Q07092 1604 aaPredicted RBP14.94□□□□□ -0.02
NUDCD3-205ENST00000472246 XRN1Q8IZH2 1706 aaKnown RBP14.94□□□□□ -0.02
NUDCD3-205ENST00000472246 AMOTL2Q9Y2J4 779 aa14.93□□□□□ -0.02
NUDCD3-205ENST00000472246 NEXMIFQ5QGS0 1516 aa14.92□□□□□ -0.02
NUDCD3-205ENST00000472246 KIF1BO60333 1816 aa14.9□□□□□ -0.02
NUDCD3-205ENST00000472246 METP08581 1390 aa14.9□□□□□ -0.02
NUDCD3-205ENST00000472246 JCADQ9P266 1359 aa14.9□□□□□ -0.02
NUDCD3-205ENST00000472246 C19orf44Q9H6X5 657 aa14.9□□□□□ -0.02
NUDCD3-205ENST00000472246 AHDC1Q5TGY3 1603 aaPredicted RBP14.89□□□□□ -0.03
NUDCD3-205ENST00000472246 ATF3P18847 181 aa14.89□□□□□ -0.03
NUDCD3-205ENST00000472246 POTEAQ6S8J7 498 aa14.89□□□□□ -0.03
NUDCD3-205ENST00000472246 CADPS2Q86UW7 1296 aa14.89□□□□□ -0.03
NUDCD3-205ENST00000472246 HFM1A2PYH4 1435 aa14.89□□□□□ -0.03
NUDCD3-205ENST00000472246 TRIM52Q96A61 297 aa14.87□□□□□ -0.03
NUDCD3-205ENST00000472246 LRP6O75581 1613 aa14.87□□□□□ -0.03
NUDCD3-205ENST00000472246 DCCP43146 1447 aa14.86□□□□□ -0.03
NUDCD3-205ENST00000472246 NALCNQ8IZF0 1738 aa14.86□□□□□ -0.03
NUDCD3-205ENST00000472246 BRINP3Q76B58 766 aa14.85□□□□□ -0.03
NUDCD3-205ENST00000472246 SETD1AO15047 1707 aaKnown RBP14.85□□□□□ -0.03
NUDCD3-205ENST00000472246 ASXL1Q8IXJ9 1541 aa14.85□□□□□ -0.03
NUDCD3-205ENST00000472246 MST1RQ04912 1400 aa14.84□□□□□ -0.03
NUDCD3-205ENST00000472246 SHPRHQ149N8 1683 aa14.84□□□□□ -0.03
NUDCD3-205ENST00000472246 ADGRL3Q9HAR2 1447 aa14.83□□□□□ -0.03
NUDCD3-205ENST00000472246 SLC4A1APQ9BWU0 796 aaKnown RBP14.83□□□□□ -0.04
NUDCD3-205ENST00000472246 NHSL1Q5SYE7 1610 aa14.82□□□□□ -0.04
NUDCD3-205ENST00000472246 PPLO60437 1756 aa14.81□□□□□ -0.04
NUDCD3-205ENST00000472246 SPATA31A6Q5VVP1 1343 aa14.81□□□□□ -0.04
NUDCD3-205ENST00000472246 FOXD1Q16676 465 aa14.8□□□□□ -0.04
NUDCD3-205ENST00000472246 PTCH1Q13635 1447 aa14.79□□□□□ -0.04
NUDCD3-205ENST00000472246 MEX3CQ5U5Q3 659 aaKnown RBP14.79□□□□□ -0.04
NUDCD3-205ENST00000472246 ROBO2Q9HCK4 1378 aa14.78□□□□□ -0.04
NUDCD3-205ENST00000472246 VGFO15240 615 aaPredicted RBP14.78□□□□□ -0.04
NUDCD3-205ENST00000472246 DDX17Q92841 729 aaKnown RBP14.78□□□□□ -0.04
NUDCD3-205ENST00000472246 SETD5Q9C0A6 1442 aa14.77□□□□□ -0.04
NUDCD3-205ENST00000472246 RPGRIP1LQ68CZ1 1315 aa14.76□□□□□ -0.05
NUDCD3-205ENST00000472246 NUTM2BA6NNL0 878 aaPredicted RBP14.76□□□□□ -0.05
NUDCD3-205ENST00000472246 NUTM2EB1AL46 878 aaPredicted RBP14.76□□□□□ -0.05
NUDCD3-205ENST00000472246 NUTM2AQ8IVF1 878 aaPredicted RBP14.76□□□□□ -0.05
NUDCD3-205ENST00000472246 C1orf167Q5SNV9 1468 aa14.75□□□□□ -0.05
NUDCD3-205ENST00000472246 PRAG1Q86YV5 1406 aa14.75□□□□□ -0.05
NUDCD3-205ENST00000472246 CCDC144AA2RUR9 1427 aa14.74□□□□□ -0.05
NUDCD3-205ENST00000472246 IFT172Q9UG01 1749 aa14.73□□□□□ -0.05
NUDCD3-205ENST00000472246 ZNF772Q68DY9 489 aaPredicted RBP14.73□□□□□ -0.05
NUDCD3-205ENST00000472246 PNPLA6Q8IY17 1366 aa14.73□□□□□ -0.05
NUDCD3-205ENST00000472246 SPATA31E1Q6ZUB1 1445 aa14.72□□□□□ -0.05
NUDCD3-205ENST00000472246 ADGRF5Q8IZF2 1346 aa14.71□□□□□ -0.05
NUDCD3-205ENST00000472246 LAMC1P11047 1609 aa14.71□□□□□ -0.05
NUDCD3-205ENST00000472246 RGL3Q3MIN7 710 aa14.71□□□□□ -0.05
NUDCD3-205ENST00000472246 LRRC59Q96AG4 307 aaKnown RBP14.71□□□□□ -0.05
NUDCD3-205ENST00000472246 MPHOSPH9Q99550 1183 aa14.71□□□□□ -0.05
NUDCD3-205ENST00000472246 ORAI2Q96SN7 254 aa14.7□□□□□ -0.06
NUDCD3-205ENST00000472246 AFF2P51816 1311 aa14.69□□□□□ -0.06
NUDCD3-205ENST00000472246 CDC42BPGQ6DT37 1551 aa14.68□□□□□ -0.06
NUDCD3-205ENST00000472246 C8orf37Q96NL8 207 aa14.67□□□□□ -0.06
NUDCD3-205ENST00000472246 PIK3C2GO75747 1445 aa14.66□□□□□ -0.06
NUDCD3-205ENST00000472246 ANKRD30BQ9BXX2 1392 aa14.66□□□□□ -0.06
NUDCD3-205ENST00000472246 STK26Q9P289 416 aa14.66□□□□□ -0.06
NUDCD3-205ENST00000472246 KNDC1Q76NI1 1749 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms