RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 NEURL4Q96JN8 1562 aa12.43□□□□□ -0.42
TSPAN1-205ENST00000472170 SLC26A8Q96RN1 970 aa12.42□□□□□ -0.42
TSPAN1-205ENST00000472170 SYNMO15061 1565 aa12.41□□□□□ -0.42
TSPAN1-205ENST00000472170 KCNA6P17658 529 aa12.41□□□□□ -0.42
TSPAN1-205ENST00000472170 PROSER2Q86WR7 435 aaPredicted RBP12.41□□□□□ -0.42
TSPAN1-205ENST00000472170 E9PCH4 1651 aa12.41□□□□□ -0.42
TSPAN1-205ENST00000472170 ADGRB3O60242 1522 aa12.41□□□□□ -0.42
TSPAN1-205ENST00000472170 RIMS2Q9UQ26 1411 aa12.4□□□□□ -0.42
TSPAN1-205ENST00000472170 PIP4K2BP78356 416 aa12.4□□□□□ -0.42
TSPAN1-205ENST00000472170 TBX22Q9Y458 520 aa12.39□□□□□ -0.43
TSPAN1-205ENST00000472170 VGFO15240 615 aaPredicted RBP12.37□□□□□ -0.43
TSPAN1-205ENST00000472170 NUTM2DQ5VT03 806 aaPredicted RBP12.37□□□□□ -0.43
TSPAN1-205ENST00000472170 C14orf37Q86TY3 774 aa12.37□□□□□ -0.43
TSPAN1-205ENST00000472170 SENP3Q9H4L4 574 aaPredicted RBP12.37□□□□□ -0.43
TSPAN1-205ENST00000472170 PLEKHG1Q9ULL1 1385 aa12.37□□□□□ -0.43
TSPAN1-205ENST00000472170 MPHOSPH9Q99550 1183 aa12.36□□□□□ -0.43
TSPAN1-205ENST00000472170 TMEM131LA2VDJ0 1609 aa12.36□□□□□ -0.43
TSPAN1-205ENST00000472170 SPHKAPQ2M3C7 1700 aa12.35□□□□□ -0.43
TSPAN1-205ENST00000472170 SETD5Q9C0A6 1442 aa12.35□□□□□ -0.43
TSPAN1-205ENST00000472170 RPGRIP1LQ68CZ1 1315 aa12.35□□□□□ -0.43
TSPAN1-205ENST00000472170 MYO5BQ9ULV0 1848 aa12.34□□□□□ -0.43
TSPAN1-205ENST00000472170 KIF1BO60333 1816 aa12.34□□□□□ -0.43
TSPAN1-205ENST00000472170 LRRC7Q96NW7 1537 aa12.32□□□□□ -0.44
TSPAN1-205ENST00000472170 ZFYVE9O95405 1425 aa12.32□□□□□ -0.44
TSPAN1-205ENST00000472170 MSH6P52701 1360 aa12.31□□□□□ -0.44
TSPAN1-205ENST00000472170 PIK3R4Q99570 1358 aa12.31□□□□□ -0.44
TSPAN1-205ENST00000472170 CCDC144AA2RUR9 1427 aa12.3□□□□□ -0.44
TSPAN1-205ENST00000472170 HRCP23327 699 aa12.3□□□□□ -0.44
TSPAN1-205ENST00000472170 HSPA1LP34931 641 aa12.3□□□□□ -0.44
TSPAN1-205ENST00000472170 AMOTL2Q9Y2J4 779 aa12.3□□□□□ -0.44
TSPAN1-205ENST00000472170 TMEM94Q12767 1356 aa12.3□□□□□ -0.44
TSPAN1-205ENST00000472170 TRPM2O94759 1503 aa12.29□□□□□ -0.44
TSPAN1-205ENST00000472170 ATF3P18847 181 aa12.29□□□□□ -0.44
TSPAN1-205ENST00000472170 FOXD1Q16676 465 aa12.29□□□□□ -0.44
TSPAN1-205ENST00000472170 RGL3Q3MIN7 710 aa12.29□□□□□ -0.44
TSPAN1-205ENST00000472170 C19orf44Q9H6X5 657 aa12.28□□□□□ -0.44
TSPAN1-205ENST00000472170 STRCP1A6NGW2 1772 aa12.28□□□□□ -0.44
TSPAN1-205ENST00000472170 NKTRP30414 1462 aaKnown RBP12.27□□□□□ -0.44
TSPAN1-205ENST00000472170 DIP2AQ14689 1571 aa12.27□□□□□ -0.44
TSPAN1-205ENST00000472170 CADPS2Q86UW7 1296 aa12.27□□□□□ -0.45
TSPAN1-205ENST00000472170 CHD2O14647 1828 aaKnown RBP12.27□□□□□ -0.45
TSPAN1-205ENST00000472170 NCOA3Q9Y6Q9 1424 aa12.27□□□□□ -0.45
TSPAN1-205ENST00000472170 RBM33Q96EV2 1170 aaKnown RBP12.26□□□□□ -0.45
TSPAN1-205ENST00000472170 SLAIN2Q9P270 581 aa12.26□□□□□ -0.45
TSPAN1-205ENST00000472170 RAB3GAP2Q9H2M9 1393 aa12.26□□□□□ -0.45
TSPAN1-205ENST00000472170 CLTCL1P53675 1640 aa12.25□□□□□ -0.45
TSPAN1-205ENST00000472170 MED1Q15648 1581 aaPredicted RBP12.23□□□□□ -0.45
TSPAN1-205ENST00000472170 ADAMTS13Q76LX8 1427 aa12.23□□□□□ -0.45
TSPAN1-205ENST00000472170 ANKRD30BQ9BXX2 1392 aa12.23□□□□□ -0.45
TSPAN1-205ENST00000472170 PHF23Q9BUL5 403 aaPredicted RBP12.23□□□□□ -0.45
TSPAN1-205ENST00000472170 FAM135BQ49AJ0 1406 aa12.21□□□□□ -0.45
TSPAN1-205ENST00000472170 STAC3Q96MF2 364 aa12.21□□□□□ -0.45
TSPAN1-205ENST00000472170 NWD1Q149M9 1564 aa12.21□□□□□ -0.46
TSPAN1-205ENST00000472170 SETBP1Q9Y6X0 1596 aa12.2□□□□□ -0.46
TSPAN1-205ENST00000472170 NEXMIFQ5QGS0 1516 aa12.2□□□□□ -0.46
TSPAN1-205ENST00000472170 XIRP1Q702N8 1843 aaKnown RBP12.19□□□□□ -0.46
TSPAN1-205ENST00000472170 METP08581 1390 aa12.18□□□□□ -0.46
TSPAN1-205ENST00000472170 STK26Q9P289 416 aa12.16□□□□□ -0.46
TSPAN1-205ENST00000472170 PPLO60437 1756 aa12.15□□□□□ -0.46
TSPAN1-205ENST00000472170 ADGRF5Q8IZF2 1346 aa12.15□□□□□ -0.46
TSPAN1-205ENST00000472170 DCAF11Q8TEB1 546 aa12.15□□□□□ -0.46
TSPAN1-205ENST00000472170 KDM2AQ9Y2K7 1162 aa12.15□□□□□ -0.46
TSPAN1-205ENST00000472170 DHX57Q6P158 1386 aaKnown RBP12.15□□□□□ -0.46
TSPAN1-205ENST00000472170 PTPRUQ92729 1446 aa12.14□□□□□ -0.47
TSPAN1-205ENST00000472170 ALKQ9UM73 1620 aa12.14□□□□□ -0.47
TSPAN1-205ENST00000472170 DCCP43146 1447 aa12.13□□□□□ -0.47
TSPAN1-205ENST00000472170 SPATA31E1Q6ZUB1 1445 aa12.13□□□□□ -0.47
TSPAN1-205ENST00000472170 C14orf93Q9H972 538 aaKnown RBP12.13□□□□□ -0.47
TSPAN1-205ENST00000472170 ROBO1Q9Y6N7 1651 aa12.13□□□□□ -0.47
TSPAN1-205ENST00000472170 NRXN3Q9Y4C0 1643 aa12.12□□□□□ -0.47
TSPAN1-205ENST00000472170 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.12□□□□□ -0.47
TSPAN1-205ENST00000472170 TMEM132EQ6IEE7 984 aa12.12□□□□□ -0.47
TSPAN1-205ENST00000472170 LRRC59Q96AG4 307 aaKnown RBP12.11□□□□□ -0.47
TSPAN1-205ENST00000472170 SIRT1Q96EB6 747 aa12.11□□□□□ -0.47
TSPAN1-205ENST00000472170 POGKQ9P215 609 aa12.11□□□□□ -0.47
TSPAN1-205ENST00000472170 JCADQ9P266 1359 aa12.1□□□□□ -0.47
TSPAN1-205ENST00000472170 MEX3CQ5U5Q3 659 aaKnown RBP12.1□□□□□ -0.47
TSPAN1-205ENST00000472170 PTCH1Q13635 1447 aa12.1□□□□□ -0.47
TSPAN1-205ENST00000472170 ADGRL3Q9HAR2 1447 aa12.1□□□□□ -0.47
TSPAN1-205ENST00000472170 XRN1Q8IZH2 1706 aaKnown RBP12.09□□□□□ -0.47
TSPAN1-205ENST00000472170 ABCC11Q96J66 1382 aa12.09□□□□□ -0.47
TSPAN1-205ENST00000472170 CFAP70Q5T0N1 1121 aa12.09□□□□□ -0.47
TSPAN1-205ENST00000472170 BRINP3Q76B58 766 aa12.09□□□□□ -0.47
TSPAN1-205ENST00000472170 PHLPP1O60346 1717 aa12.08□□□□□ -0.47
TSPAN1-205ENST00000472170 LRPPRCP42704 1394 aaKnown RBP12.08□□□□□ -0.48
TSPAN1-205ENST00000472170 TRIM26Q12899 539 aaPredicted RBP12.08□□□□□ -0.48
TSPAN1-205ENST00000472170 ESCO1Q5FWF5 840 aa12.08□□□□□ -0.48
TSPAN1-205ENST00000472170 WAPLQ7Z5K2 1190 aa12.08□□□□□ -0.48
TSPAN1-205ENST00000472170 SPATA31A6Q5VVP1 1343 aa12.08□□□□□ -0.48
TSPAN1-205ENST00000472170 ROBO2Q9HCK4 1378 aa12.07□□□□□ -0.48
TSPAN1-205ENST00000472170 PIK3C2GO75747 1445 aa12.07□□□□□ -0.48
TSPAN1-205ENST00000472170 RGS17Q9UGC6 210 aaPredicted RBP12.06□□□□□ -0.48
TSPAN1-205ENST00000472170 MYOM2P54296 1465 aa12.06□□□□□ -0.48
TSPAN1-205ENST00000472170 IFT172Q9UG01 1749 aa12.06□□□□□ -0.48
TSPAN1-205ENST00000472170 YTHDC2Q9H6S0 1430 aaKnown RBP12.05□□□□□ -0.48
TSPAN1-205ENST00000472170 LAMC1P11047 1609 aa12.04□□□□□ -0.48
TSPAN1-205ENST00000472170 MST1RQ04912 1400 aa12.04□□□□□ -0.48
TSPAN1-205ENST00000472170 PRAG1Q86YV5 1406 aa12.03□□□□□ -0.48
TSPAN1-205ENST00000472170 NUTM2BA6NNL0 878 aaPredicted RBP12.03□□□□□ -0.48
TSPAN1-205ENST00000472170 NUTM2EB1AL46 878 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms