RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 KIF3AQ9Y496 699 aa16■□□□□ 0.15
PCCB-210ENST00000471595 GORABQ5T7V8 394 aa16■□□□□ 0.15
PCCB-210ENST00000471595 TRHP20396 242 aaPredicted RBP15.99■□□□□ 0.15
PCCB-210ENST00000471595 SYNJ2O15056 1496 aa15.99■□□□□ 0.15
PCCB-210ENST00000471595 ADAMTS8Q9UP79 889 aa15.99■□□□□ 0.15
PCCB-210ENST00000471595 ATP6V1DQ9Y5K8 247 aa15.99■□□□□ 0.15
PCCB-210ENST00000471595 NOL8Q76FK4 1167 aaKnown RBP15.99■□□□□ 0.15
PCCB-210ENST00000471595 WDR97A6NE52 1622 aa15.98■□□□□ 0.15
PCCB-210ENST00000471595 ARHGAP5Q13017 1502 aa15.98■□□□□ 0.15
PCCB-210ENST00000471595 TOPBP1Q92547 1522 aa15.98■□□□□ 0.15
PCCB-210ENST00000471595 CCDC34Q96HJ3 373 aa15.98■□□□□ 0.15
PCCB-210ENST00000471595 SCAPERQ9BY12 1400 aa15.97■□□□□ 0.15
PCCB-210ENST00000471595 C9orf84Q5VXU9 1444 aa15.97■□□□□ 0.15
PCCB-210ENST00000471595 SMG6Q86US8 1419 aaKnown RBP15.97■□□□□ 0.15
PCCB-210ENST00000471595 GNAI1P63096 354 aa15.97■□□□□ 0.15
PCCB-210ENST00000471595 RILPL2Q969X0 211 aa15.97■□□□□ 0.15
PCCB-210ENST00000471595 NBPF8Q3BBV2 869 aa15.96■□□□□ 0.15
PCCB-210ENST00000471595 CHMP4CQ96CF2 233 aa15.96■□□□□ 0.15
PCCB-210ENST00000471595 CHMP3Q9Y3E7 222 aa15.96■□□□□ 0.15
PCCB-210ENST00000471595 TROQ12816 1431 aaPredicted RBP15.96■□□□□ 0.15
PCCB-210ENST00000471595 PPP2R1AP30153 589 aa15.96■□□□□ 0.14
PCCB-210ENST00000471595 POLA1P09884 1462 aaPredicted RBP15.95■□□□□ 0.14
PCCB-210ENST00000471595 LTV1Q96GA3 475 aaPredicted RBP15.95■□□□□ 0.14
PCCB-210ENST00000471595 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.95■□□□□ 0.14
PCCB-210ENST00000471595 DAPK1P53355 1430 aa15.95■□□□□ 0.14
PCCB-210ENST00000471595 MAP3K1Q13233 1512 aa15.95■□□□□ 0.14
PCCB-210ENST00000471595 TAF7LQ5H9L4 462 aa15.95■□□□□ 0.14
PCCB-210ENST00000471595 PLEKHH2Q8IVE3 1493 aa15.95■□□□□ 0.14
PCCB-210ENST00000471595 PNISRQ8TF01 805 aaKnown RBP15.93■□□□□ 0.14
PCCB-210ENST00000471595 DNMBPQ6XZF7 1577 aa15.93■□□□□ 0.14
PCCB-210ENST00000471595 NUTM2FA1L443 756 aa15.93■□□□□ 0.14
PCCB-210ENST00000471595 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.93■□□□□ 0.14
PCCB-210ENST00000471595 RUFY2Q8WXA3 655 aa15.93■□□□□ 0.14
PCCB-210ENST00000471595 ZNF330Q9Y3S2 320 aaPredicted RBP15.93■□□□□ 0.14
PCCB-210ENST00000471595 C22orf23Q9BZE7 217 aa15.92■□□□□ 0.14
PCCB-210ENST00000471595 IFT140Q96RY7 1462 aa15.92■□□□□ 0.14
PCCB-210ENST00000471595 NAIPQ13075 1403 aa15.92■□□□□ 0.14
PCCB-210ENST00000471595 PANK1Q8TE04 598 aa15.92■□□□□ 0.14
PCCB-210ENST00000471595 CDCA7LQ96GN5 454 aa15.92■□□□□ 0.14
PCCB-210ENST00000471595 INTS3Q68E01 1043 aaKnown RBP15.91■□□□□ 0.14
PCCB-210ENST00000471595 FOXD4L5Q5VV16 416 aaPredicted RBP15.91■□□□□ 0.14
PCCB-210ENST00000471595 FOXD4L4Q8WXT5 416 aaPredicted RBP15.91■□□□□ 0.14
PCCB-210ENST00000471595 PDE3AQ14432 1141 aa15.91■□□□□ 0.14
PCCB-210ENST00000471595 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
PCCB-210ENST00000471595 C1orf141Q5JVX7 400 aa15.91■□□□□ 0.14
PCCB-210ENST00000471595 NFKBIBQ15653 356 aa15.9■□□□□ 0.14
PCCB-210ENST00000471595 NINLQ9Y2I6 1382 aa15.9■□□□□ 0.14
PCCB-210ENST00000471595 DIAPH3Q9NSV4 1193 aa15.9■□□□□ 0.14
PCCB-210ENST00000471595 NUCB2P80303 420 aa15.9■□□□□ 0.14
PCCB-210ENST00000471595 TEFQ10587 303 aa15.89■□□□□ 0.13
PCCB-210ENST00000471595 AKNAQ7Z591 1439 aa15.89■□□□□ 0.13
PCCB-210ENST00000471595 TULP1O00294 542 aaPredicted RBP15.89■□□□□ 0.13
PCCB-210ENST00000471595 TCP11L2Q8N4U5 519 aa15.89■□□□□ 0.13
PCCB-210ENST00000471595 MTHFSP49914 203 aa15.88■□□□□ 0.13
PCCB-210ENST00000471595 PCF11O94913 1555 aaKnown RBP15.88■□□□□ 0.13
PCCB-210ENST00000471595 NBPF1Q3BBV0 1214 aa15.88■□□□□ 0.13
PCCB-210ENST00000471595 PRG4Q92954 1404 aaPredicted RBP15.88■□□□□ 0.13
PCCB-210ENST00000471595 H3BQV1 296 aa15.88■□□□□ 0.13
PCCB-210ENST00000471595 IFFO2Q5TF58 517 aa15.88■□□□□ 0.13
PCCB-210ENST00000471595 LNPKQ9C0E8 428 aa15.87■□□□□ 0.13
PCCB-210ENST00000471595 ERBINQ96RT1 1412 aa15.87■□□□□ 0.13
PCCB-210ENST00000471595 ZKSCAN1P17029 563 aaPredicted RBP15.86■□□□□ 0.13
PCCB-210ENST00000471595 SF3A1Q15459 793 aaKnown RBP15.86■□□□□ 0.13
PCCB-210ENST00000471595 CFAP70Q5T0N1 1121 aa15.86■□□□□ 0.13
PCCB-210ENST00000471595 GGNBP2Q9H3C7 697 aa15.86■□□□□ 0.13
PCCB-210ENST00000471595 ABCA10Q8WWZ4 1543 aa15.86■□□□□ 0.13
PCCB-210ENST00000471595 NESP48681 1621 aa15.86■□□□□ 0.13
PCCB-210ENST00000471595 FAM184AQ8NB25 1140 aa15.86■□□□□ 0.13
PCCB-210ENST00000471595 EPRSP07814 1512 aaKnown RBP15.86■□□□□ 0.13
PCCB-210ENST00000471595 CDC45O75419 566 aa15.86■□□□□ 0.13
PCCB-210ENST00000471595 NEXNQ0ZGT2 675 aa15.86■□□□□ 0.13
PCCB-210ENST00000471595 HSP90AA2PQ14568 343 aaPredicted RBP15.85■□□□□ 0.13
PCCB-210ENST00000471595 CABP2Q9NPB3 220 aa15.85■□□□□ 0.13
PCCB-210ENST00000471595 LRRFIP1Q32MZ4 808 aaKnown RBP15.85■□□□□ 0.13
PCCB-210ENST00000471595 OSCARQ8IYS5 282 aa15.85■□□□□ 0.13
PCCB-210ENST00000471595 HSP90AB4PQ58FF6 505 aa15.84■□□□□ 0.13
PCCB-210ENST00000471595 C9orf78Q9NZ63 289 aaPredicted RBP15.84■□□□□ 0.13
PCCB-210ENST00000471595 CUL7Q14999 1698 aa15.84■□□□□ 0.13
PCCB-210ENST00000471595 CT47B1P0C2W7 299 aaPredicted RBP15.84■□□□□ 0.13
PCCB-210ENST00000471595 FKBP5Q13451 457 aaPredicted RBP15.84■□□□□ 0.13
PCCB-210ENST00000471595 BACH2Q9BYV9 841 aa15.83■□□□□ 0.13
PCCB-210ENST00000471595 AFAP1Q8N556 730 aa15.83■□□□□ 0.12
PCCB-210ENST00000471595 GOLGA6L19H0YKK7 550 aa15.82■□□□□ 0.12
PCCB-210ENST00000471595 IFIT2P09913 472 aaKnown RBP15.82■□□□□ 0.12
PCCB-210ENST00000471595 TMEM132EQ6IEE7 984 aa15.82■□□□□ 0.12
PCCB-210ENST00000471595 TSPYL4Q9UJ04 414 aa15.82■□□□□ 0.12
PCCB-210ENST00000471595 DDX58O95786 925 aaKnown RBP15.82■□□□□ 0.12
PCCB-210ENST00000471595 HMOX1P09601 288 aa15.82■□□□□ 0.12
PCCB-210ENST00000471595 ANO2Q9NQ90 1003 aa15.82■□□□□ 0.12
PCCB-210ENST00000471595 ISY1Q9ULR0 285 aaKnown RBP15.82■□□□□ 0.12
PCCB-210ENST00000471595 RNF20Q5VTR2 975 aa15.81■□□□□ 0.12
PCCB-210ENST00000471595 EIF2S2P20042 333 aaKnown RBP15.81■□□□□ 0.12
PCCB-210ENST00000471595 WDR63Q8IWG1 891 aa15.81■□□□□ 0.12
PCCB-210ENST00000471595 PTPN23Q9H3S7 1636 aa15.81■□□□□ 0.12
PCCB-210ENST00000471595 CC2D2AQ9P2K1 1620 aa15.81■□□□□ 0.12
PCCB-210ENST00000471595 PDZRN3Q9UPQ7 1066 aa15.81■□□□□ 0.12
PCCB-210ENST00000471595 ARID3AQ99856 593 aa15.8■□□□□ 0.12
PCCB-210ENST00000471595 MRE11P49959 708 aa15.8■□□□□ 0.12
PCCB-210ENST00000471595 CCDC184Q52MB2 194 aa15.8■□□□□ 0.12
PCCB-210ENST00000471595 KIAA0586Q9BVV6 1533 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms