RNA–Protein interactions for RNA: ENST00000471563.5

GCOM1-206, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-206ENST00000471563 HNRNPUQ00839 825 aaKnown RBP eCLIP20.79■□□□□ 0.92
GCOM1-206ENST00000471563 CNGB1Q14028 1251 aaPredicted RBP20.79■□□□□ 0.92
GCOM1-206ENST00000471563 MLECQ14165 292 aa20.79■□□□□ 0.92
GCOM1-206ENST00000471563 CFAP70Q5T0N1 1121 aa20.79■□□□□ 0.92
GCOM1-206ENST00000471563 ARHGAP31Q2M1Z3 1444 aa20.78■□□□□ 0.92
GCOM1-206ENST00000471563 PRKRIP1Q9H875 184 aaPredicted RBP20.78■□□□□ 0.92
GCOM1-206ENST00000471563 ZC3H13Q5T200 1668 aaKnown RBP20.78■□□□□ 0.92
GCOM1-206ENST00000471563 FBXO31Q5XUX0 539 aaPredicted RBP20.77■□□□□ 0.92
GCOM1-206ENST00000471563 MYOM2P54296 1465 aa20.76■□□□□ 0.91
GCOM1-206ENST00000471563 IDI1Q13907 227 aa20.76■□□□□ 0.91
GCOM1-206ENST00000471563 DISP3Q9P2K9 1392 aa20.76■□□□□ 0.91
GCOM1-206ENST00000471563 CCDC184Q52MB2 194 aa20.75■□□□□ 0.91
GCOM1-206ENST00000471563 IFT172Q9UG01 1749 aa20.75■□□□□ 0.91
GCOM1-206ENST00000471563 REREQ9P2R6 1566 aa20.75■□□□□ 0.91
GCOM1-206ENST00000471563 NUTM2DQ5VT03 806 aaPredicted RBP20.74■□□□□ 0.91
GCOM1-206ENST00000471563 AGLP35573 1532 aa20.73■□□□□ 0.91
GCOM1-206ENST00000471563 ERICH6BQ5W0A0 696 aa20.73■□□□□ 0.91
GCOM1-206ENST00000471563 ARHGEF40Q8TER5 1519 aa20.72■□□□□ 0.91
GCOM1-206ENST00000471563 PIK3C2BO00750 1634 aa20.72■□□□□ 0.91
GCOM1-206ENST00000471563 NRXN1Q9ULB1 1477 aa20.71■□□□□ 0.91
GCOM1-206ENST00000471563 FANCIQ9NVI1 1328 aa20.71■□□□□ 0.91
GCOM1-206ENST00000471563 IQGAP1P46940 1657 aa20.71■□□□□ 0.91
GCOM1-206ENST00000471563 SCAF11Q99590 1463 aaKnown RBP20.71■□□□□ 0.91
GCOM1-206ENST00000471563 PREX1Q8TCU6 1659 aa20.69■□□□□ 0.9
GCOM1-206ENST00000471563 PPLO60437 1756 aa20.68■□□□□ 0.9
GCOM1-206ENST00000471563 MSH5O43196 834 aa20.68■□□□□ 0.9
GCOM1-206ENST00000471563 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
GCOM1-206ENST00000471563 SLC52A1Q9NWF4 448 aa20.67■□□□□ 0.9
GCOM1-206ENST00000471563 KIAA1210Q9ULL0 1709 aa20.67■□□□□ 0.9
GCOM1-206ENST00000471563 TMF1P82094 1093 aa20.67■□□□□ 0.9
GCOM1-206ENST00000471563 BCL11AQ9H165 835 aa20.67■□□□□ 0.9
GCOM1-206ENST00000471563 CLTCQ00610 1675 aaKnown RBP20.66■□□□□ 0.9
GCOM1-206ENST00000471563 TRHP20396 242 aaPredicted RBP20.66■□□□□ 0.9
GCOM1-206ENST00000471563 PIK3C2GO75747 1445 aa20.66■□□□□ 0.9
GCOM1-206ENST00000471563 RPGRIP1LQ68CZ1 1315 aa20.65■□□□□ 0.9
GCOM1-206ENST00000471563 ERVK-7P63135 1459 aa20.65■□□□□ 0.9
GCOM1-206ENST00000471563 PPP6R1Q9UPN7 881 aa20.65■□□□□ 0.9
GCOM1-206ENST00000471563 IRX6P78412 446 aaPredicted RBP20.64■□□□□ 0.89
GCOM1-206ENST00000471563 TMEM132EQ6IEE7 984 aa20.64■□□□□ 0.89
GCOM1-206ENST00000471563 NEXMIFQ5QGS0 1516 aa20.63■□□□□ 0.89
GCOM1-206ENST00000471563 C14orf93Q9H972 538 aaKnown RBP20.63■□□□□ 0.89
GCOM1-206ENST00000471563 MRS2Q9HD23 443 aa20.62■□□□□ 0.89
GCOM1-206ENST00000471563 PPP4R2Q9NY27 417 aa20.61■□□□□ 0.89
GCOM1-206ENST00000471563 MYO5BQ9ULV0 1848 aa20.61■□□□□ 0.89
GCOM1-206ENST00000471563 EIF3AQ14152 1382 aaKnown RBP20.6■□□□□ 0.89
GCOM1-206ENST00000471563 TMEM131LA2VDJ0 1609 aa20.6■□□□□ 0.89
GCOM1-206ENST00000471563 VGFO15240 615 aaPredicted RBP20.6■□□□□ 0.89
GCOM1-206ENST00000471563 TRAK1Q9UPV9 953 aa20.59■□□□□ 0.89
GCOM1-206ENST00000471563 PER1O15534 1290 aaPredicted RBP20.58■□□□□ 0.89
GCOM1-206ENST00000471563 PANK3Q9H999 370 aa20.58■□□□□ 0.89
GCOM1-206ENST00000471563 FAM9BQ8IZU0 186 aa20.57■□□□□ 0.88
GCOM1-206ENST00000471563 ADGRB1O14514 1584 aa20.57■□□□□ 0.88
GCOM1-206ENST00000471563 ZMYM3Q14202 1370 aa20.56■□□□□ 0.88
GCOM1-206ENST00000471563 ZBED9Q6R2W3 1325 aa20.56■□□□□ 0.88
GCOM1-206ENST00000471563 ESF1Q9H501 851 aaKnown RBP20.56■□□□□ 0.88
GCOM1-206ENST00000471563 STAG3Q9UJ98 1225 aa20.56■□□□□ 0.88
GCOM1-206ENST00000471563 SETBP1Q9Y6X0 1596 aa20.56■□□□□ 0.88
GCOM1-206ENST00000471563 SPATA31D1Q6ZQQ2 1576 aa20.54■□□□□ 0.88
GCOM1-206ENST00000471563 CENPJQ9HC77 1338 aaPredicted RBP20.51■□□□□ 0.87
GCOM1-206ENST00000471563 CC2D1BQ5T0F9 858 aaKnown RBP20.51■□□□□ 0.87
GCOM1-206ENST00000471563 ZFYVE9O95405 1425 aa20.5■□□□□ 0.87
GCOM1-206ENST00000471563 CDCA8Q53HL2 280 aa20.5■□□□□ 0.87
GCOM1-206ENST00000471563 ERICH6Q7L0X2 663 aa20.5■□□□□ 0.87
GCOM1-206ENST00000471563 A2ML1A8K2U0 1454 aa20.49■□□□□ 0.87
GCOM1-206ENST00000471563 RALBP1Q15311 655 aa20.47■□□□□ 0.87
GCOM1-206ENST00000471563 KTN1Q86UP2 1357 aaKnown RBP20.47■□□□□ 0.87
GCOM1-206ENST00000471563 MYO3AQ8NEV4 1616 aa20.47■□□□□ 0.87
GCOM1-206ENST00000471563 STK26Q9P289 416 aa20.47■□□□□ 0.87
GCOM1-206ENST00000471563 MYBBP1AQ9BQG0 1328 aaKnown RBP20.46■□□□□ 0.87
GCOM1-206ENST00000471563 PARD3Q8TEW0 1356 aa20.46■□□□□ 0.87
GCOM1-206ENST00000471563 ASXL1Q8IXJ9 1541 aa20.46■□□□□ 0.87
GCOM1-206ENST00000471563 CEBPAP49715 358 aaPredicted RBP20.45■□□□□ 0.86
GCOM1-206ENST00000471563 MYOM1P52179 1685 aa20.45■□□□□ 0.86
GCOM1-206ENST00000471563 SBNO2Q9Y2G9 1366 aa20.44■□□□□ 0.86
GCOM1-206ENST00000471563 SAFB2Q14151 953 aaKnown RBP eCLIP20.44■□□□□ 0.86
GCOM1-206ENST00000471563 TMC1Q8TDI8 760 aa20.44■□□□□ 0.86
GCOM1-206ENST00000471563 KDM5AP29375 1690 aaKnown RBP20.43■□□□□ 0.86
GCOM1-206ENST00000471563 PLPPR3Q6T4P5 718 aa20.42■□□□□ 0.86
GCOM1-206ENST00000471563 QRICH2Q9H0J4 1663 aa20.42■□□□□ 0.86
GCOM1-206ENST00000471563 RIMS2Q9UQ26 1411 aa20.42■□□□□ 0.86
GCOM1-206ENST00000471563 TNRQ92752 1358 aa20.42■□□□□ 0.86
GCOM1-206ENST00000471563 DNAJC5Q9H3Z4 198 aa20.42■□□□□ 0.86
GCOM1-206ENST00000471563 B4GALNT3Q6L9W6 998 aa20.41■□□□□ 0.86
GCOM1-206ENST00000471563 PNISRQ8TF01 805 aaKnown RBP20.41■□□□□ 0.86
GCOM1-206ENST00000471563 KNSTRNQ9Y448 316 aa20.41■□□□□ 0.86
GCOM1-206ENST00000471563 SLC24A1O60721 1099 aa20.41■□□□□ 0.86
GCOM1-206ENST00000471563 ARHGEF28Q8N1W1 1705 aaKnown RBP20.4■□□□□ 0.86
GCOM1-206ENST00000471563 SMG6Q86US8 1419 aaKnown RBP20.4■□□□□ 0.86
GCOM1-206ENST00000471563 AMER1Q5JTC6 1135 aaPredicted RBP20.39■□□□□ 0.86
GCOM1-206ENST00000471563 ALKQ9UM73 1620 aa20.39■□□□□ 0.85
GCOM1-206ENST00000471563 SENP3-EIF4A1A0A087X0R7 540 aa20.39■□□□□ 0.85
GCOM1-206ENST00000471563 BRD4O60885 1362 aaPredicted RBP20.38■□□□□ 0.85
GCOM1-206ENST00000471563 NLRP13Q86W25 1043 aa20.37■□□□□ 0.85
GCOM1-206ENST00000471563 CARD14Q9BXL6 1004 aa20.37■□□□□ 0.85
GCOM1-206ENST00000471563 YTHDC2Q9H6S0 1430 aaKnown RBP20.36■□□□□ 0.85
GCOM1-206ENST00000471563 SLC12A5Q9H2X9 1139 aa20.36■□□□□ 0.85
GCOM1-206ENST00000471563 PTPRMP28827 1452 aa20.35■□□□□ 0.85
GCOM1-206ENST00000471563 PRAM1Q96QH2 718 aa20.35■□□□□ 0.85
GCOM1-206ENST00000471563 TULP4Q9NRJ4 1543 aa20.34■□□□□ 0.85
GCOM1-206ENST00000471563 CABP2Q9NPB3 220 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms