RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 PCGF6Q9BYE7 350 aa37.06■■■■□ 3.52
COL15A1-203ENST00000471477 NPHP4O75161 1426 aaPredicted RBP37.06■■■■□ 3.52
COL15A1-203ENST00000471477 ANKRD30BQ9BXX2 1392 aa37.04■■■■□ 3.52
COL15A1-203ENST00000471477 ZNF326Q5BKZ1 582 aaKnown RBP37.01■■■■□ 3.51
COL15A1-203ENST00000471477 NEXMIFQ5QGS0 1516 aa36.96■■■■□ 3.51
COL15A1-203ENST00000471477 HDGFP51858 240 aaKnown RBP36.95■■■■□ 3.51
COL15A1-203ENST00000471477 NUTM2DQ5VT03 806 aaPredicted RBP36.94■■■■□ 3.5
COL15A1-203ENST00000471477 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.94■■■■□ 3.5
COL15A1-203ENST00000471477 SPATA31E1Q6ZUB1 1445 aa36.94■■■■□ 3.5
COL15A1-203ENST00000471477 PPP1R15AO75807 674 aaPredicted RBP36.93■■■■□ 3.5
COL15A1-203ENST00000471477 DHX57Q6P158 1386 aaKnown RBP36.92■■■■□ 3.5
COL15A1-203ENST00000471477 PPLO60437 1756 aa36.91■■■■□ 3.5
COL15A1-203ENST00000471477 PLEKHG1Q9ULL1 1385 aa36.89■■■■□ 3.5
COL15A1-203ENST00000471477 SENP3Q9H4L4 574 aaPredicted RBP36.86■■■■□ 3.49
COL15A1-203ENST00000471477 IFT172Q9UG01 1749 aa36.86■■■■□ 3.49
COL15A1-203ENST00000471477 RGL3Q3MIN7 710 aa36.85■■■■□ 3.49
COL15A1-203ENST00000471477 RPGRIP1LQ68CZ1 1315 aa36.83■■■■□ 3.49
COL15A1-203ENST00000471477 BCANQ96GW7 911 aa36.83■■■■□ 3.49
COL15A1-203ENST00000471477 ZNF335Q9H4Z2 1342 aaPredicted RBP36.82■■■■□ 3.48
COL15A1-203ENST00000471477 NRXN3Q9Y4C0 1643 aa36.79■■■■□ 3.48
COL15A1-203ENST00000471477 SLC26A8Q96RN1 970 aa36.78■■■■□ 3.48
COL15A1-203ENST00000471477 LTBP4Q8N2S1 1624 aa36.77■■■■□ 3.48
COL15A1-203ENST00000471477 SETBP1Q9Y6X0 1596 aa36.77■■■■□ 3.48
COL15A1-203ENST00000471477 ADAMTS13Q76LX8 1427 aa36.75■■■■□ 3.47
COL15A1-203ENST00000471477 VGFO15240 615 aaPredicted RBP36.74■■■■□ 3.47
COL15A1-203ENST00000471477 DIP2AQ14689 1571 aa36.74■■■■□ 3.47
COL15A1-203ENST00000471477 STRCP1A6NGW2 1772 aa36.74■■■■□ 3.47
COL15A1-203ENST00000471477 CERKQ8TCT0 537 aa36.73■■■■□ 3.47
COL15A1-203ENST00000471477 TBX22Q9Y458 520 aa36.67■■■■□ 3.46
COL15A1-203ENST00000471477 ADGRF5Q8IZF2 1346 aa36.65■■■■□ 3.46
COL15A1-203ENST00000471477 CHD2O14647 1828 aaKnown RBP36.65■■■■□ 3.46
COL15A1-203ENST00000471477 SIN3AQ96ST3 1273 aa36.65■■■■□ 3.46
COL15A1-203ENST00000471477 MYOM2P54296 1465 aa36.64■■■■□ 3.46
COL15A1-203ENST00000471477 CPS1P31327 1500 aa36.63■■■■□ 3.45
COL15A1-203ENST00000471477 SETD1AO15047 1707 aaKnown RBP36.63■■■■□ 3.45
COL15A1-203ENST00000471477 NWD1Q149M9 1564 aa36.61■■■■□ 3.45
COL15A1-203ENST00000471477 ALKQ9UM73 1620 aa36.6■■■■□ 3.45
COL15A1-203ENST00000471477 IQSEC2Q5JU85 1478 aa36.6■■■■□ 3.45
COL15A1-203ENST00000471477 PIK3C2GO75747 1445 aa36.58■■■■□ 3.45
COL15A1-203ENST00000471477 NRXN1Q9ULB1 1477 aa36.57■■■■□ 3.45
COL15A1-203ENST00000471477 NEUROD1Q13562 356 aa36.57■■■■□ 3.44
COL15A1-203ENST00000471477 KCNA6P17658 529 aa36.56■■■■□ 3.44
COL15A1-203ENST00000471477 DCAF11Q8TEB1 546 aa36.56■■■■□ 3.44
COL15A1-203ENST00000471477 FBXO41Q8TF61 875 aa36.56■■■■□ 3.44
COL15A1-203ENST00000471477 PIK3R4Q99570 1358 aa36.56■■■■□ 3.44
COL15A1-203ENST00000471477 METP08581 1390 aa36.54■■■■□ 3.44
COL15A1-203ENST00000471477 KDM2AQ9Y2K7 1162 aa36.53■■■■□ 3.44
COL15A1-203ENST00000471477 PTPRUQ92729 1446 aa36.51■■■■□ 3.44
COL15A1-203ENST00000471477 LRRC7Q96NW7 1537 aa36.51■■■■□ 3.43
COL15A1-203ENST00000471477 NKTRP30414 1462 aaKnown RBP36.5■■■■□ 3.43
COL15A1-203ENST00000471477 XRN1Q8IZH2 1706 aaKnown RBP36.49■■■■□ 3.43
COL15A1-203ENST00000471477 LAMC1P11047 1609 aa36.48■■■■□ 3.43
COL15A1-203ENST00000471477 XIRP1Q702N8 1843 aaKnown RBP36.47■■■■□ 3.43
COL15A1-203ENST00000471477 ILDR1Q86SU0 546 aaPredicted RBP36.46■■■■□ 3.43
COL15A1-203ENST00000471477 STAC3Q96MF2 364 aa36.46■■■■□ 3.43
COL15A1-203ENST00000471477 AMOTL2Q9Y2J4 779 aa36.43■■■■□ 3.42
COL15A1-203ENST00000471477 ASXL1Q8IXJ9 1541 aa36.43■■■■□ 3.42
COL15A1-203ENST00000471477 L3MBTL2Q969R5 705 aa36.42■■■■□ 3.42
COL15A1-203ENST00000471477 C14orf93Q9H972 538 aaKnown RBP36.4■■■■□ 3.42
COL15A1-203ENST00000471477 CFAP70Q5T0N1 1121 aa36.39■■■■□ 3.42
COL15A1-203ENST00000471477 PROSER2Q86WR7 435 aaPredicted RBP36.39■■■■□ 3.42
COL15A1-203ENST00000471477 TMEM94Q12767 1356 aa36.36■■■■□ 3.41
COL15A1-203ENST00000471477 RBM33Q96EV2 1170 aaKnown RBP36.35■■■■□ 3.41
COL15A1-203ENST00000471477 CLSPNQ9HAW4 1339 aa36.35■■■■□ 3.41
COL15A1-203ENST00000471477 CCER1Q8TC90 406 aaPredicted RBP36.34■■■■□ 3.41
COL15A1-203ENST00000471477 TONSLQ96HA7 1378 aa36.34■■■■□ 3.41
COL15A1-203ENST00000471477 PRAG1Q86YV5 1406 aa36.34■■■■□ 3.41
COL15A1-203ENST00000471477 TMEM132EQ6IEE7 984 aa36.34■■■■□ 3.41
COL15A1-203ENST00000471477 KNDC1Q76NI1 1749 aa36.31■■■■□ 3.4
COL15A1-203ENST00000471477 KIAA1210Q9ULL0 1709 aa36.31■■■■□ 3.4
COL15A1-203ENST00000471477 PTCH1Q13635 1447 aa36.29■■■■□ 3.4
COL15A1-203ENST00000471477 ADGRB1O14514 1584 aa36.29■■■■□ 3.4
COL15A1-203ENST00000471477 LRPPRCP42704 1394 aaKnown RBP36.28■■■■□ 3.4
COL15A1-203ENST00000471477 YTHDC2Q9H6S0 1430 aaKnown RBP36.27■■■■□ 3.4
COL15A1-203ENST00000471477 STK26Q9P289 416 aa36.25■■■■□ 3.39
COL15A1-203ENST00000471477 ROBO2Q9HCK4 1378 aa36.25■■■■□ 3.39
COL15A1-203ENST00000471477 TECPR2O15040 1411 aa36.23■■■■□ 3.39
COL15A1-203ENST00000471477 NCOA3Q9Y6Q9 1424 aa36.23■■■■□ 3.39
COL15A1-203ENST00000471477 UBAP1LF5GYI3 381 aa36.22■■■■□ 3.39
COL15A1-203ENST00000471477 ABCC11Q96J66 1382 aa36.21■■■■□ 3.39
COL15A1-203ENST00000471477 TRPM1Q7Z4N2 1603 aa36.2■■■■□ 3.38
COL15A1-203ENST00000471477 C14orf37Q86TY3 774 aa36.18■■■■□ 3.38
COL15A1-203ENST00000471477 MSH6P52701 1360 aa36.18■■■■□ 3.38
COL15A1-203ENST00000471477 NALCNQ8IZF0 1738 aa36.18■■■■□ 3.38
COL15A1-203ENST00000471477 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.17■■■■□ 3.38
COL15A1-203ENST00000471477 TOM1O60784 492 aa36.17■■■■□ 3.38
COL15A1-203ENST00000471477 NBPF1Q3BBV0 1214 aa36.13■■■■□ 3.37
COL15A1-203ENST00000471477 DLC1Q96QB1 1528 aa36.12■■■■□ 3.37
COL15A1-203ENST00000471477 NBPF8Q3BBV2 869 aa36.12■■■■□ 3.37
COL15A1-203ENST00000471477 ADGRL3Q9HAR2 1447 aa36.11■■■■□ 3.37
COL15A1-203ENST00000471477 FAM135BQ49AJ0 1406 aa36.1■■■■□ 3.37
COL15A1-203ENST00000471477 ARHGEF28Q8N1W1 1705 aaKnown RBP36.1■■■■□ 3.37
COL15A1-203ENST00000471477 WAPLQ7Z5K2 1190 aa36.09■■■■□ 3.37
COL15A1-203ENST00000471477 C19orf44Q9H6X5 657 aa36.09■■■■□ 3.37
COL15A1-203ENST00000471477 TRAK1Q9UPV9 953 aa36.09■■■■□ 3.37
COL15A1-203ENST00000471477 PLEKHH1Q9ULM0 1364 aa36.09■■■■□ 3.37
COL15A1-203ENST00000471477 SIRT1Q96EB6 747 aa36.06■■■■□ 3.36
COL15A1-203ENST00000471477 DCCP43146 1447 aa36.04■■■■□ 3.36
COL15A1-203ENST00000471477 TIMELESSQ9UNS1 1208 aa36.04■■■■□ 3.36
COL15A1-203ENST00000471477 PRAM1Q96QH2 718 aa36.03■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms