RNA–Protein interactions for RNA: ENST00000471417.5

LINC01140-204, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 751 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-204ENST00000471417 ZFYVE9O95405 1425 aa14.62□□□□□ -0.07
LINC01140-204ENST00000471417 ITGAEP38570 1179 aa14.61□□□□□ -0.07
LINC01140-204ENST00000471417 FAM135BQ49AJ0 1406 aa14.6□□□□□ -0.07
LINC01140-204ENST00000471417 RIMS2Q9UQ26 1411 aa14.6□□□□□ -0.07
LINC01140-204ENST00000471417 CHGAP10645 457 aaKnown RBP14.6□□□□□ -0.07
LINC01140-204ENST00000471417 NUTM2DQ5VT03 806 aaPredicted RBP14.6□□□□□ -0.07
LINC01140-204ENST00000471417 RGS17Q9UGC6 210 aaPredicted RBP14.59□□□□□ -0.07
LINC01140-204ENST00000471417 UNC13BO14795 1591 aa14.59□□□□□ -0.07
LINC01140-204ENST00000471417 MYO5BQ9ULV0 1848 aa14.59□□□□□ -0.07
LINC01140-204ENST00000471417 TMEM131LA2VDJ0 1609 aa14.59□□□□□ -0.07
LINC01140-204ENST00000471417 ROCK1Q13464 1354 aa14.59□□□□□ -0.07
LINC01140-204ENST00000471417 PLEKHG1Q9ULL1 1385 aa14.59□□□□□ -0.07
LINC01140-204ENST00000471417 PPP1R15AO75807 674 aaPredicted RBP14.58□□□□□ -0.08
LINC01140-204ENST00000471417 GCC2Q8IWJ2 1684 aa14.58□□□□□ -0.08
LINC01140-204ENST00000471417 NWD1Q149M9 1564 aa14.57□□□□□ -0.08
LINC01140-204ENST00000471417 NKTRP30414 1462 aaKnown RBP14.57□□□□□ -0.08
LINC01140-204ENST00000471417 E9PCH4 1651 aa14.56□□□□□ -0.08
LINC01140-204ENST00000471417 HDGFP51858 240 aaKnown RBP14.56□□□□□ -0.08
LINC01140-204ENST00000471417 NUP155O75694 1391 aa14.56□□□□□ -0.08
LINC01140-204ENST00000471417 TBX22Q9Y458 520 aa14.55□□□□□ -0.08
LINC01140-204ENST00000471417 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.54□□□□□ -0.08
LINC01140-204ENST00000471417 SLAIN2Q9P270 581 aa14.54□□□□□ -0.08
LINC01140-204ENST00000471417 MSH6P52701 1360 aa14.54□□□□□ -0.08
LINC01140-204ENST00000471417 ROBO1Q9Y6N7 1651 aa14.54□□□□□ -0.08
LINC01140-204ENST00000471417 IQGAP3Q86VI3 1631 aa14.53□□□□□ -0.08
LINC01140-204ENST00000471417 ADAMTS13Q76LX8 1427 aa14.53□□□□□ -0.08
LINC01140-204ENST00000471417 CHD2O14647 1828 aaKnown RBP14.52□□□□□ -0.08
LINC01140-204ENST00000471417 POTEAQ6S8J7 498 aa14.49□□□□□ -0.09
LINC01140-204ENST00000471417 C14orf37Q86TY3 774 aa14.48□□□□□ -0.09
LINC01140-204ENST00000471417 PTPRUQ92729 1446 aa14.48□□□□□ -0.09
LINC01140-204ENST00000471417 AMOTL2Q9Y2J4 779 aa14.47□□□□□ -0.09
LINC01140-204ENST00000471417 NCOA3Q9Y6Q9 1424 aa14.46□□□□□ -0.09
LINC01140-204ENST00000471417 PIK3R4Q99570 1358 aa14.46□□□□□ -0.1
LINC01140-204ENST00000471417 C19orf44Q9H6X5 657 aa14.45□□□□□ -0.1
LINC01140-204ENST00000471417 PHLPP1O60346 1717 aa14.44□□□□□ -0.1
LINC01140-204ENST00000471417 DIP2AQ14689 1571 aa14.44□□□□□ -0.1
LINC01140-204ENST00000471417 ZNF326Q5BKZ1 582 aaKnown RBP14.44□□□□□ -0.1
LINC01140-204ENST00000471417 JCADQ9P266 1359 aa14.44□□□□□ -0.1
LINC01140-204ENST00000471417 ATF3P18847 181 aa14.43□□□□□ -0.1
LINC01140-204ENST00000471417 CADPS2Q86UW7 1296 aa14.43□□□□□ -0.1
LINC01140-204ENST00000471417 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.43□□□□□ -0.1
LINC01140-204ENST00000471417 TRPM2O94759 1503 aa14.42□□□□□ -0.1
LINC01140-204ENST00000471417 NRXN3Q9Y4C0 1643 aa14.42□□□□□ -0.1
LINC01140-204ENST00000471417 NAIPQ13075 1403 aa14.41□□□□□ -0.1
LINC01140-204ENST00000471417 RRBP1Q9P2E9 1410 aaKnown RBP14.41□□□□□ -0.1
LINC01140-204ENST00000471417 COL16A1Q07092 1604 aaPredicted RBP14.41□□□□□ -0.1
LINC01140-204ENST00000471417 SPHKAPQ2M3C7 1700 aa14.41□□□□□ -0.1
LINC01140-204ENST00000471417 METP08581 1390 aa14.41□□□□□ -0.1
LINC01140-204ENST00000471417 BRINP3Q76B58 766 aa14.4□□□□□ -0.1
LINC01140-204ENST00000471417 SETBP1Q9Y6X0 1596 aa14.39□□□□□ -0.11
LINC01140-204ENST00000471417 LRP6O75581 1613 aa14.38□□□□□ -0.11
LINC01140-204ENST00000471417 CLTCL1P53675 1640 aa14.38□□□□□ -0.11
LINC01140-204ENST00000471417 TRIM52Q96A61 297 aa14.37□□□□□ -0.11
LINC01140-204ENST00000471417 XRN1Q8IZH2 1706 aaKnown RBP14.37□□□□□ -0.11
LINC01140-204ENST00000471417 AHDC1Q5TGY3 1603 aaPredicted RBP14.37□□□□□ -0.11
LINC01140-204ENST00000471417 NEXMIFQ5QGS0 1516 aa14.36□□□□□ -0.11
LINC01140-204ENST00000471417 SPATA31A6Q5VVP1 1343 aa14.36□□□□□ -0.11
LINC01140-204ENST00000471417 DCCP43146 1447 aa14.34□□□□□ -0.11
LINC01140-204ENST00000471417 MST1RQ04912 1400 aa14.34□□□□□ -0.11
LINC01140-204ENST00000471417 MEX3CQ5U5Q3 659 aaKnown RBP14.34□□□□□ -0.11
LINC01140-204ENST00000471417 DDX17Q92841 729 aaKnown RBP14.34□□□□□ -0.11
LINC01140-204ENST00000471417 NUTM2BA6NNL0 878 aaPredicted RBP14.33□□□□□ -0.12
LINC01140-204ENST00000471417 NUTM2EB1AL46 878 aaPredicted RBP14.33□□□□□ -0.12
LINC01140-204ENST00000471417 NUTM2AQ8IVF1 878 aaPredicted RBP14.33□□□□□ -0.12
LINC01140-204ENST00000471417 ASXL1Q8IXJ9 1541 aa14.32□□□□□ -0.12
LINC01140-204ENST00000471417 SLC4A1APQ9BWU0 796 aaKnown RBP14.32□□□□□ -0.12
LINC01140-204ENST00000471417 HFM1A2PYH4 1435 aa14.32□□□□□ -0.12
LINC01140-204ENST00000471417 FOXD1Q16676 465 aa14.31□□□□□ -0.12
LINC01140-204ENST00000471417 SETD1AO15047 1707 aaKnown RBP14.31□□□□□ -0.12
LINC01140-204ENST00000471417 ADGRL3Q9HAR2 1447 aa14.31□□□□□ -0.12
LINC01140-204ENST00000471417 SHPRHQ149N8 1683 aa14.3□□□□□ -0.12
LINC01140-204ENST00000471417 VGFO15240 615 aaPredicted RBP14.3□□□□□ -0.12
LINC01140-204ENST00000471417 KIF1BO60333 1816 aa14.29□□□□□ -0.12
LINC01140-204ENST00000471417 ZNF772Q68DY9 489 aaPredicted RBP14.29□□□□□ -0.12
LINC01140-204ENST00000471417 ROBO2Q9HCK4 1378 aa14.29□□□□□ -0.12
LINC01140-204ENST00000471417 SETD5Q9C0A6 1442 aa14.29□□□□□ -0.12
LINC01140-204ENST00000471417 NALCNQ8IZF0 1738 aa14.28□□□□□ -0.12
LINC01140-204ENST00000471417 LRRC59Q96AG4 307 aaKnown RBP14.27□□□□□ -0.13
LINC01140-204ENST00000471417 NHSL1Q5SYE7 1610 aa14.26□□□□□ -0.13
LINC01140-204ENST00000471417 RPGRIP1LQ68CZ1 1315 aa14.26□□□□□ -0.13
LINC01140-204ENST00000471417 ORAI2Q96SN7 254 aa14.26□□□□□ -0.13
LINC01140-204ENST00000471417 C1orf167Q5SNV9 1468 aa14.25□□□□□ -0.13
LINC01140-204ENST00000471417 PNPLA6Q8IY17 1366 aa14.25□□□□□ -0.13
LINC01140-204ENST00000471417 AFF2P51816 1311 aa14.25□□□□□ -0.13
LINC01140-204ENST00000471417 PTCH1Q13635 1447 aa14.24□□□□□ -0.13
LINC01140-204ENST00000471417 RXRBP28702 533 aa14.24□□□□□ -0.13
LINC01140-204ENST00000471417 ADGRF5Q8IZF2 1346 aa14.23□□□□□ -0.13
LINC01140-204ENST00000471417 RGL3Q3MIN7 710 aa14.23□□□□□ -0.13
LINC01140-204ENST00000471417 UPF1Q92900 1129 aaKnown RBP eCLIP14.22□□□□□ -0.13
LINC01140-204ENST00000471417 C8orf37Q96NL8 207 aa14.22□□□□□ -0.13
LINC01140-204ENST00000471417 SOS2Q07890 1332 aaPredicted RBP14.21□□□□□ -0.13
LINC01140-204ENST00000471417 ADAMTS2O95450 1211 aa14.21□□□□□ -0.13
LINC01140-204ENST00000471417 MPHOSPH9Q99550 1183 aa14.21□□□□□ -0.13
LINC01140-204ENST00000471417 PRAG1Q86YV5 1406 aa14.21□□□□□ -0.13
LINC01140-204ENST00000471417 PPLO60437 1756 aa14.21□□□□□ -0.13
LINC01140-204ENST00000471417 STK26Q9P289 416 aa14.2□□□□□ -0.14
LINC01140-204ENST00000471417 CCDC144AA2RUR9 1427 aa14.19□□□□□ -0.14
LINC01140-204ENST00000471417 SPATA31E1Q6ZUB1 1445 aa14.19□□□□□ -0.14
LINC01140-204ENST00000471417 WAPLQ7Z5K2 1190 aa14.19□□□□□ -0.14
LINC01140-204ENST00000471417 QTRT2Q9H974 415 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms