RNA–Protein interactions for RNA: ENST00000471387.6

YIF1A-205, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 5 BASIC

Gene YIF1A, Length 854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-205ENST00000471387 NUP155O75694 1391 aa32.09■■■□□ 2.73
YIF1A-205ENST00000471387 ZFYVE9O95405 1425 aa32.07■■■□□ 2.72
YIF1A-205ENST00000471387 RRBP1Q9P2E9 1410 aaKnown RBP32.05■■■□□ 2.72
YIF1A-205ENST00000471387 RIMS2Q9UQ26 1411 aa32.02■■■□□ 2.72
YIF1A-205ENST00000471387 CHGAP10645 457 aaKnown RBP32.02■■■□□ 2.72
YIF1A-205ENST00000471387 KCNA6P17658 529 aa32.01■■■□□ 2.71
YIF1A-205ENST00000471387 RBM33Q96EV2 1170 aaKnown RBP31.99■■■□□ 2.71
YIF1A-205ENST00000471387 BCANQ96GW7 911 aa31.99■■■□□ 2.71
YIF1A-205ENST00000471387 NUTM2DQ5VT03 806 aaPredicted RBP31.97■■■□□ 2.71
YIF1A-205ENST00000471387 PLEKHG1Q9ULL1 1385 aa31.96■■■□□ 2.71
YIF1A-205ENST00000471387 TMEM94Q12767 1356 aa31.95■■■□□ 2.71
YIF1A-205ENST00000471387 PPP1R15AO75807 674 aaPredicted RBP31.93■■■□□ 2.7
YIF1A-205ENST00000471387 PROSER2Q86WR7 435 aaPredicted RBP31.93■■■□□ 2.7
YIF1A-205ENST00000471387 NWD1Q149M9 1564 aa31.93■■■□□ 2.7
YIF1A-205ENST00000471387 CHD2O14647 1828 aaKnown RBP31.92■■■□□ 2.7
YIF1A-205ENST00000471387 NAIPQ13075 1403 aa31.92■■■□□ 2.7
YIF1A-205ENST00000471387 HDGFP51858 240 aaKnown RBP31.9■■■□□ 2.7
YIF1A-205ENST00000471387 SPHKAPQ2M3C7 1700 aa31.89■■■□□ 2.7
YIF1A-205ENST00000471387 MED1Q15648 1581 aaPredicted RBP31.89■■■□□ 2.7
YIF1A-205ENST00000471387 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.87■■■□□ 2.69
YIF1A-205ENST00000471387 NKTRP30414 1462 aaKnown RBP31.85■■■□□ 2.69
YIF1A-205ENST00000471387 ADAMTS13Q76LX8 1427 aa31.85■■■□□ 2.69
YIF1A-205ENST00000471387 TBX22Q9Y458 520 aa31.85■■■□□ 2.69
YIF1A-205ENST00000471387 SOCS7O14512 581 aa31.79■■■□□ 2.68
YIF1A-205ENST00000471387 FAM135BQ49AJ0 1406 aa31.78■■■□□ 2.68
YIF1A-205ENST00000471387 CLTCL1P53675 1640 aa31.77■■■□□ 2.68
YIF1A-205ENST00000471387 HFM1A2PYH4 1435 aa31.75■■■□□ 2.67
YIF1A-205ENST00000471387 ROBO1Q9Y6N7 1651 aa31.74■■■□□ 2.67
YIF1A-205ENST00000471387 DIP2AQ14689 1571 aa31.73■■■□□ 2.67
YIF1A-205ENST00000471387 TRIM52Q96A61 297 aa31.73■■■□□ 2.67
YIF1A-205ENST00000471387 MSH6P52701 1360 aa31.72■■■□□ 2.67
YIF1A-205ENST00000471387 NRXN3Q9Y4C0 1643 aa31.72■■■□□ 2.67
YIF1A-205ENST00000471387 PTPRUQ92729 1446 aa31.72■■■□□ 2.67
YIF1A-205ENST00000471387 ZNF326Q5BKZ1 582 aaKnown RBP31.71■■■□□ 2.67
YIF1A-205ENST00000471387 TRPM2O94759 1503 aa31.7■■■□□ 2.67
YIF1A-205ENST00000471387 PIK3R4Q99570 1358 aa31.68■■■□□ 2.66
YIF1A-205ENST00000471387 SLAIN2Q9P270 581 aa31.67■■■□□ 2.66
YIF1A-205ENST00000471387 KIF1BO60333 1816 aa31.67■■■□□ 2.66
YIF1A-205ENST00000471387 AMOTL2Q9Y2J4 779 aa31.66■■■□□ 2.66
YIF1A-205ENST00000471387 NEXMIFQ5QGS0 1516 aa31.65■■■□□ 2.66
YIF1A-205ENST00000471387 SETBP1Q9Y6X0 1596 aa31.64■■■□□ 2.66
YIF1A-205ENST00000471387 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.63■■■□□ 2.65
YIF1A-205ENST00000471387 SLC4A1APQ9BWU0 796 aaKnown RBP31.62■■■□□ 2.65
YIF1A-205ENST00000471387 NCOA3Q9Y6Q9 1424 aa31.62■■■□□ 2.65
YIF1A-205ENST00000471387 PHF23Q9BUL5 403 aaPredicted RBP31.6■■■□□ 2.65
YIF1A-205ENST00000471387 METP08581 1390 aa31.59■■■□□ 2.65
YIF1A-205ENST00000471387 C14orf37Q86TY3 774 aa31.59■■■□□ 2.65
YIF1A-205ENST00000471387 XRN1Q8IZH2 1706 aaKnown RBP31.58■■■□□ 2.65
YIF1A-205ENST00000471387 FOXD1Q16676 465 aa31.57■■■□□ 2.64
YIF1A-205ENST00000471387 PHLPP1O60346 1717 aa31.55■■■□□ 2.64
YIF1A-205ENST00000471387 C19orf44Q9H6X5 657 aa31.55■■■□□ 2.64
YIF1A-205ENST00000471387 RGS17Q9UGC6 210 aaPredicted RBP31.53■■■□□ 2.64
YIF1A-205ENST00000471387 ATF3P18847 181 aa31.49■■■□□ 2.63
YIF1A-205ENST00000471387 CADPS2Q86UW7 1296 aa31.49■■■□□ 2.63
YIF1A-205ENST00000471387 SETD1AO15047 1707 aaKnown RBP31.46■■■□□ 2.63
YIF1A-205ENST00000471387 COL16A1Q07092 1604 aaPredicted RBP31.46■■■□□ 2.63
YIF1A-205ENST00000471387 PPLO60437 1756 aa31.45■■■□□ 2.63
YIF1A-205ENST00000471387 VGFO15240 615 aaPredicted RBP31.43■■■□□ 2.62
YIF1A-205ENST00000471387 MPHOSPH9Q99550 1183 aa31.43■■■□□ 2.62
YIF1A-205ENST00000471387 RPGRIP1LQ68CZ1 1315 aa31.41■■■□□ 2.62
YIF1A-205ENST00000471387 BRINP3Q76B58 766 aa31.39■■■□□ 2.62
YIF1A-205ENST00000471387 JCADQ9P266 1359 aa31.38■■■□□ 2.61
YIF1A-205ENST00000471387 DCCP43146 1447 aa31.38■■■□□ 2.61
YIF1A-205ENST00000471387 AHDC1Q5TGY3 1603 aaPredicted RBP31.38■■■□□ 2.61
YIF1A-205ENST00000471387 NALCNQ8IZF0 1738 aa31.38■■■□□ 2.61
YIF1A-205ENST00000471387 MST1RQ04912 1400 aa31.36■■■□□ 2.61
YIF1A-205ENST00000471387 ADGRL3Q9HAR2 1447 aa31.33■■■□□ 2.61
YIF1A-205ENST00000471387 RGL3Q3MIN7 710 aa31.33■■■□□ 2.61
YIF1A-205ENST00000471387 POTEAQ6S8J7 498 aa31.33■■■□□ 2.61
YIF1A-205ENST00000471387 CCDC144AA2RUR9 1427 aa31.32■■■□□ 2.61
YIF1A-205ENST00000471387 ROBO2Q9HCK4 1378 aa31.32■■■□□ 2.6
YIF1A-205ENST00000471387 SPATA31E1Q6ZUB1 1445 aa31.32■■■□□ 2.6
YIF1A-205ENST00000471387 ADGRF5Q8IZF2 1346 aa31.31■■■□□ 2.6
YIF1A-205ENST00000471387 SETD5Q9C0A6 1442 aa31.31■■■□□ 2.6
YIF1A-205ENST00000471387 ASXL1Q8IXJ9 1541 aa31.3■■■□□ 2.6
YIF1A-205ENST00000471387 IFT172Q9UG01 1749 aa31.29■■■□□ 2.6
YIF1A-205ENST00000471387 LRP6O75581 1613 aa31.27■■■□□ 2.6
YIF1A-205ENST00000471387 PTCH1Q13635 1447 aa31.27■■■□□ 2.6
YIF1A-205ENST00000471387 SHPRHQ149N8 1683 aa31.26■■■□□ 2.6
YIF1A-205ENST00000471387 DDX17Q92841 729 aaKnown RBP31.26■■■□□ 2.59
YIF1A-205ENST00000471387 NHSL1Q5SYE7 1610 aa31.25■■■□□ 2.59
YIF1A-205ENST00000471387 PRAG1Q86YV5 1406 aa31.24■■■□□ 2.59
YIF1A-205ENST00000471387 SPATA31A6Q5VVP1 1343 aa31.22■■■□□ 2.59
YIF1A-205ENST00000471387 RAB3GAP2Q9H2M9 1393 aa31.21■■■□□ 2.59
YIF1A-205ENST00000471387 C1orf167Q5SNV9 1468 aa31.2■■■□□ 2.58
YIF1A-205ENST00000471387 ANKRD30BQ9BXX2 1392 aa31.17■■■□□ 2.58
YIF1A-205ENST00000471387 TMEM132EQ6IEE7 984 aa31.15■■■□□ 2.58
YIF1A-205ENST00000471387 ORAI2Q96SN7 254 aa31.15■■■□□ 2.58
YIF1A-205ENST00000471387 STK26Q9P289 416 aa31.15■■■□□ 2.58
YIF1A-205ENST00000471387 NUTM2BA6NNL0 878 aaPredicted RBP31.14■■■□□ 2.58
YIF1A-205ENST00000471387 NUTM2EB1AL46 878 aaPredicted RBP31.14■■■□□ 2.58
YIF1A-205ENST00000471387 NUTM2AQ8IVF1 878 aaPredicted RBP31.14■■■□□ 2.58
YIF1A-205ENST00000471387 ACIN1Q9UKV3 1341 aaKnown RBP31.13■■■□□ 2.57
YIF1A-205ENST00000471387 MEX3CQ5U5Q3 659 aaKnown RBP31.12■■■□□ 2.57
YIF1A-205ENST00000471387 WAPLQ7Z5K2 1190 aa31.12■■■□□ 2.57
YIF1A-205ENST00000471387 PIK3C2GO75747 1445 aa31.12■■■□□ 2.57
YIF1A-205ENST00000471387 LRRC59Q96AG4 307 aaKnown RBP31.1■■■□□ 2.57
YIF1A-205ENST00000471387 LRPPRCP42704 1394 aaKnown RBP31.09■■■□□ 2.57
YIF1A-205ENST00000471387 LAMC1P11047 1609 aa31.08■■■□□ 2.57
YIF1A-205ENST00000471387 TECPR2O15040 1411 aa31.07■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms