RNA–Protein interactions for RNA: ENST00000471358.1

PCBP4-209, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-209ENST00000471358 ZFYVE9O95405 1425 aa26.17■■□□□ 1.78
PCBP4-209ENST00000471358 XIRP1Q702N8 1843 aaKnown RBP26.17■■□□□ 1.78
PCBP4-209ENST00000471358 GCC2Q8IWJ2 1684 aa26.17■■□□□ 1.78
PCBP4-209ENST00000471358 TMEM94Q12767 1356 aa26.17■■□□□ 1.78
PCBP4-209ENST00000471358 RIMS2Q9UQ26 1411 aa26.16■■□□□ 1.78
PCBP4-209ENST00000471358 PROSER2Q86WR7 435 aaPredicted RBP26.16■■□□□ 1.78
PCBP4-209ENST00000471358 E9PCH4 1651 aa26.15■■□□□ 1.78
PCBP4-209ENST00000471358 TMEM131LA2VDJ0 1609 aa26.14■■□□□ 1.78
PCBP4-209ENST00000471358 MYO5BQ9ULV0 1848 aa26.14■■□□□ 1.78
PCBP4-209ENST00000471358 PPP1R15AO75807 674 aaPredicted RBP26.13■■□□□ 1.77
PCBP4-209ENST00000471358 HDGFP51858 240 aaKnown RBP26.13■■□□□ 1.77
PCBP4-209ENST00000471358 IQGAP3Q86VI3 1631 aa26.13■■□□□ 1.77
PCBP4-209ENST00000471358 PLEKHG1Q9ULL1 1385 aa26.12■■□□□ 1.77
PCBP4-209ENST00000471358 NUTM2DQ5VT03 806 aaPredicted RBP26.12■■□□□ 1.77
PCBP4-209ENST00000471358 MED1Q15648 1581 aaPredicted RBP26.12■■□□□ 1.77
PCBP4-209ENST00000471358 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.07■■□□□ 1.76
PCBP4-209ENST00000471358 TBX22Q9Y458 520 aa26.06■■□□□ 1.76
PCBP4-209ENST00000471358 RRBP1Q9P2E9 1410 aaKnown RBP26.05■■□□□ 1.76
PCBP4-209ENST00000471358 NWD1Q149M9 1564 aa26.04■■□□□ 1.76
PCBP4-209ENST00000471358 FAM135BQ49AJ0 1406 aa26.04■■□□□ 1.76
PCBP4-209ENST00000471358 NKTRP30414 1462 aaKnown RBP26.04■■□□□ 1.76
PCBP4-209ENST00000471358 ADAMTS13Q76LX8 1427 aa26■■□□□ 1.75
PCBP4-209ENST00000471358 PHF23Q9BUL5 403 aaPredicted RBP25.99■■□□□ 1.75
PCBP4-209ENST00000471358 CHD2O14647 1828 aaKnown RBP25.98■■□□□ 1.75
PCBP4-209ENST00000471358 MSH6P52701 1360 aa25.97■■□□□ 1.75
PCBP4-209ENST00000471358 NAIPQ13075 1403 aa25.97■■□□□ 1.75
PCBP4-209ENST00000471358 SLAIN2Q9P270 581 aa25.95■■□□□ 1.74
PCBP4-209ENST00000471358 ZNF326Q5BKZ1 582 aaKnown RBP25.92■■□□□ 1.74
PCBP4-209ENST00000471358 ROBO1Q9Y6N7 1651 aa25.91■■□□□ 1.74
PCBP4-209ENST00000471358 C14orf37Q86TY3 774 aa25.9■■□□□ 1.74
PCBP4-209ENST00000471358 AMOTL2Q9Y2J4 779 aa25.9■■□□□ 1.74
PCBP4-209ENST00000471358 SPHKAPQ2M3C7 1700 aa25.9■■□□□ 1.74
PCBP4-209ENST00000471358 PIK3R4Q99570 1358 aa25.9■■□□□ 1.74
PCBP4-209ENST00000471358 PTPRUQ92729 1446 aa25.88■■□□□ 1.73
PCBP4-209ENST00000471358 DIP2AQ14689 1571 aa25.88■■□□□ 1.73
PCBP4-209ENST00000471358 TRIM52Q96A61 297 aa25.88■■□□□ 1.73
PCBP4-209ENST00000471358 RGS17Q9UGC6 210 aaPredicted RBP25.87■■□□□ 1.73
PCBP4-209ENST00000471358 NCOA3Q9Y6Q9 1424 aa25.87■■□□□ 1.73
PCBP4-209ENST00000471358 C19orf44Q9H6X5 657 aa25.84■■□□□ 1.73
PCBP4-209ENST00000471358 TRPM2O94759 1503 aa25.83■■□□□ 1.73
PCBP4-209ENST00000471358 HFM1A2PYH4 1435 aa25.83■■□□□ 1.73
PCBP4-209ENST00000471358 CLTCL1P53675 1640 aa25.83■■□□□ 1.73
PCBP4-209ENST00000471358 NRXN3Q9Y4C0 1643 aa25.81■■□□□ 1.72
PCBP4-209ENST00000471358 ATF3P18847 181 aa25.81■■□□□ 1.72
PCBP4-209ENST00000471358 METP08581 1390 aa25.81■■□□□ 1.72
PCBP4-209ENST00000471358 CADPS2Q86UW7 1296 aa25.8■■□□□ 1.72
PCBP4-209ENST00000471358 SETBP1Q9Y6X0 1596 aa25.8■■□□□ 1.72
PCBP4-209ENST00000471358 SLC4A1APQ9BWU0 796 aaKnown RBP25.79■■□□□ 1.72
PCBP4-209ENST00000471358 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.78■■□□□ 1.72
PCBP4-209ENST00000471358 NEXMIFQ5QGS0 1516 aa25.76■■□□□ 1.71
PCBP4-209ENST00000471358 PHLPP1O60346 1717 aa25.75■■□□□ 1.71
PCBP4-209ENST00000471358 JCADQ9P266 1359 aa25.73■■□□□ 1.71
PCBP4-209ENST00000471358 FOXD1Q16676 465 aa25.73■■□□□ 1.71
PCBP4-209ENST00000471358 XRN1Q8IZH2 1706 aaKnown RBP25.72■■□□□ 1.71
PCBP4-209ENST00000471358 POTEAQ6S8J7 498 aa25.72■■□□□ 1.71
PCBP4-209ENST00000471358 KIF1BO60333 1816 aa25.71■■□□□ 1.71
PCBP4-209ENST00000471358 BRINP3Q76B58 766 aa25.7■■□□□ 1.7
PCBP4-209ENST00000471358 VGFO15240 615 aaPredicted RBP25.69■■□□□ 1.7
PCBP4-209ENST00000471358 COL16A1Q07092 1604 aaPredicted RBP25.69■■□□□ 1.7
PCBP4-209ENST00000471358 RPGRIP1LQ68CZ1 1315 aa25.65■■□□□ 1.7
PCBP4-209ENST00000471358 DCCP43146 1447 aa25.65■■□□□ 1.7
PCBP4-209ENST00000471358 AHDC1Q5TGY3 1603 aaPredicted RBP25.63■■□□□ 1.69
PCBP4-209ENST00000471358 MST1RQ04912 1400 aa25.63■■□□□ 1.69
PCBP4-209ENST00000471358 MPHOSPH9Q99550 1183 aa25.62■■□□□ 1.69
PCBP4-209ENST00000471358 ADGRL3Q9HAR2 1447 aa25.61■■□□□ 1.69
PCBP4-209ENST00000471358 SPATA31A6Q5VVP1 1343 aa25.6■■□□□ 1.69
PCBP4-209ENST00000471358 LRP6O75581 1613 aa25.59■■□□□ 1.69
PCBP4-209ENST00000471358 ROBO2Q9HCK4 1378 aa25.58■■□□□ 1.69
PCBP4-209ENST00000471358 RGL3Q3MIN7 710 aa25.58■■□□□ 1.69
PCBP4-209ENST00000471358 DDX17Q92841 729 aaKnown RBP25.58■■□□□ 1.69
PCBP4-209ENST00000471358 ASXL1Q8IXJ9 1541 aa25.58■■□□□ 1.68
PCBP4-209ENST00000471358 SETD1AO15047 1707 aaKnown RBP25.56■■□□□ 1.68
PCBP4-209ENST00000471358 MEX3CQ5U5Q3 659 aaKnown RBP25.55■■□□□ 1.68
PCBP4-209ENST00000471358 ADGRF5Q8IZF2 1346 aa25.55■■□□□ 1.68
PCBP4-209ENST00000471358 CCDC144AA2RUR9 1427 aa25.54■■□□□ 1.68
PCBP4-209ENST00000471358 NALCNQ8IZF0 1738 aa25.54■■□□□ 1.68
PCBP4-209ENST00000471358 PPLO60437 1756 aa25.54■■□□□ 1.68
PCBP4-209ENST00000471358 NUTM2BA6NNL0 878 aaPredicted RBP25.53■■□□□ 1.68
PCBP4-209ENST00000471358 NUTM2EB1AL46 878 aaPredicted RBP25.53■■□□□ 1.68
PCBP4-209ENST00000471358 NUTM2AQ8IVF1 878 aaPredicted RBP25.53■■□□□ 1.68
PCBP4-209ENST00000471358 PTCH1Q13635 1447 aa25.53■■□□□ 1.68
PCBP4-209ENST00000471358 SPATA31E1Q6ZUB1 1445 aa25.52■■□□□ 1.68
PCBP4-209ENST00000471358 SETD5Q9C0A6 1442 aa25.51■■□□□ 1.67
PCBP4-209ENST00000471358 SHPRHQ149N8 1683 aa25.51■■□□□ 1.67
PCBP4-209ENST00000471358 C1orf167Q5SNV9 1468 aa25.5■■□□□ 1.67
PCBP4-209ENST00000471358 LRRC59Q96AG4 307 aaKnown RBP25.49■■□□□ 1.67
PCBP4-209ENST00000471358 PRAG1Q86YV5 1406 aa25.48■■□□□ 1.67
PCBP4-209ENST00000471358 ORAI2Q96SN7 254 aa25.48■■□□□ 1.67
PCBP4-209ENST00000471358 STK26Q9P289 416 aa25.47■■□□□ 1.67
PCBP4-209ENST00000471358 NHSL1Q5SYE7 1610 aa25.47■■□□□ 1.67
PCBP4-209ENST00000471358 ZNF772Q68DY9 489 aaPredicted RBP25.45■■□□□ 1.66
PCBP4-209ENST00000471358 ANKRD30BQ9BXX2 1392 aa25.44■■□□□ 1.66
PCBP4-209ENST00000471358 TMEM132EQ6IEE7 984 aa25.44■■□□□ 1.66
PCBP4-209ENST00000471358 WAPLQ7Z5K2 1190 aa25.42■■□□□ 1.66
PCBP4-209ENST00000471358 PNPLA6Q8IY17 1366 aa25.42■■□□□ 1.66
PCBP4-209ENST00000471358 LRPPRCP42704 1394 aaKnown RBP25.39■■□□□ 1.65
PCBP4-209ENST00000471358 SOS2Q07890 1332 aaPredicted RBP25.38■■□□□ 1.65
PCBP4-209ENST00000471358 ACIN1Q9UKV3 1341 aaKnown RBP25.38■■□□□ 1.65
PCBP4-209ENST00000471358 RAB3GAP2Q9H2M9 1393 aa25.38■■□□□ 1.65
PCBP4-209ENST00000471358 AFF2P51816 1311 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms