RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 CCDC144AA2RUR9 1427 aa18.39■□□□□ 0.53
SCNM1-205ENST00000471039 LTBP4Q8N2S1 1624 aa18.38■□□□□ 0.53
SCNM1-205ENST00000471039 NRXN3Q9Y4C0 1643 aa18.38■□□□□ 0.53
SCNM1-205ENST00000471039 CHGAP10645 457 aaKnown RBP18.36■□□□□ 0.53
SCNM1-205ENST00000471039 LTKP29376 864 aa18.36■□□□□ 0.53
SCNM1-205ENST00000471039 DIP2AQ14689 1571 aa18.36■□□□□ 0.53
SCNM1-205ENST00000471039 SETD1AO15047 1707 aaKnown RBP18.35■□□□□ 0.53
SCNM1-205ENST00000471039 SETBP1Q9Y6X0 1596 aa18.34■□□□□ 0.53
SCNM1-205ENST00000471039 SPATA31E1Q6ZUB1 1445 aa18.33■□□□□ 0.53
SCNM1-205ENST00000471039 TXNDC2Q86VQ3 553 aa18.33■□□□□ 0.52
SCNM1-205ENST00000471039 EID1Q9Y6B2 187 aa18.33■□□□□ 0.52
SCNM1-205ENST00000471039 NWD1Q149M9 1564 aa18.33■□□□□ 0.52
SCNM1-205ENST00000471039 PLEKHG1Q9ULL1 1385 aa18.32■□□□□ 0.52
SCNM1-205ENST00000471039 ANKRD30BQ9BXX2 1392 aa18.31■□□□□ 0.52
SCNM1-205ENST00000471039 CHD2O14647 1828 aaKnown RBP18.31■□□□□ 0.52
SCNM1-205ENST00000471039 CPS1P31327 1500 aa18.29■□□□□ 0.52
SCNM1-205ENST00000471039 XIRP1Q702N8 1843 aaKnown RBP18.29■□□□□ 0.52
SCNM1-205ENST00000471039 ZNF335Q9H4Z2 1342 aaPredicted RBP18.28■□□□□ 0.52
SCNM1-205ENST00000471039 ADAMTS13Q76LX8 1427 aa18.27■□□□□ 0.52
SCNM1-205ENST00000471039 PPP1R15AO75807 674 aaPredicted RBP18.27■□□□□ 0.52
SCNM1-205ENST00000471039 ZNF326Q5BKZ1 582 aaKnown RBP18.26■□□□□ 0.51
SCNM1-205ENST00000471039 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.26■□□□□ 0.51
SCNM1-205ENST00000471039 XRN1Q8IZH2 1706 aaKnown RBP18.26■□□□□ 0.51
SCNM1-205ENST00000471039 IQSEC2Q5JU85 1478 aa18.25■□□□□ 0.51
SCNM1-205ENST00000471039 LAMC1P11047 1609 aa18.24■□□□□ 0.51
SCNM1-205ENST00000471039 NUTM2DQ5VT03 806 aaPredicted RBP18.24■□□□□ 0.51
SCNM1-205ENST00000471039 DHX57Q6P158 1386 aaKnown RBP18.24■□□□□ 0.51
SCNM1-205ENST00000471039 MYOM2P54296 1465 aa18.24■□□□□ 0.51
SCNM1-205ENST00000471039 HDGFP51858 240 aaKnown RBP18.23■□□□□ 0.51
SCNM1-205ENST00000471039 NKTRP30414 1462 aaKnown RBP18.22■□□□□ 0.51
SCNM1-205ENST00000471039 ALKQ9UM73 1620 aa18.21■□□□□ 0.51
SCNM1-205ENST00000471039 RPGRIP1LQ68CZ1 1315 aa18.21■□□□□ 0.51
SCNM1-205ENST00000471039 LRRC7Q96NW7 1537 aa18.19■□□□□ 0.5
SCNM1-205ENST00000471039 SLC26A8Q96RN1 970 aa18.19■□□□□ 0.5
SCNM1-205ENST00000471039 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
SCNM1-205ENST00000471039 NRXN1Q9ULB1 1477 aa18.19■□□□□ 0.5
SCNM1-205ENST00000471039 KNDC1Q76NI1 1749 aa18.18■□□□□ 0.5
SCNM1-205ENST00000471039 PIK3C2GO75747 1445 aa18.18■□□□□ 0.5
SCNM1-205ENST00000471039 ASXL1Q8IXJ9 1541 aa18.18■□□□□ 0.5
SCNM1-205ENST00000471039 CERKQ8TCT0 537 aa18.17■□□□□ 0.5
SCNM1-205ENST00000471039 PIK3R4Q99570 1358 aa18.17■□□□□ 0.5
SCNM1-205ENST00000471039 RGL3Q3MIN7 710 aa18.16■□□□□ 0.5
SCNM1-205ENST00000471039 BCANQ96GW7 911 aa18.16■□□□□ 0.5
SCNM1-205ENST00000471039 PTPRUQ92729 1446 aa18.15■□□□□ 0.5
SCNM1-205ENST00000471039 VGFO15240 615 aaPredicted RBP18.14■□□□□ 0.49
SCNM1-205ENST00000471039 PCGF6Q9BYE7 350 aa18.13■□□□□ 0.49
SCNM1-205ENST00000471039 TBX22Q9Y458 520 aa18.13■□□□□ 0.49
SCNM1-205ENST00000471039 NALCNQ8IZF0 1738 aa18.12■□□□□ 0.49
SCNM1-205ENST00000471039 ADGRF5Q8IZF2 1346 aa18.12■□□□□ 0.49
SCNM1-205ENST00000471039 KIAA1210Q9ULL0 1709 aa18.12■□□□□ 0.49
SCNM1-205ENST00000471039 METP08581 1390 aa18.11■□□□□ 0.49
SCNM1-205ENST00000471039 PRAG1Q86YV5 1406 aa18.11■□□□□ 0.49
SCNM1-205ENST00000471039 KCNA6P17658 529 aa18.1■□□□□ 0.49
SCNM1-205ENST00000471039 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.07■□□□□ 0.48
SCNM1-205ENST00000471039 PTCH1Q13635 1447 aa18.06■□□□□ 0.48
SCNM1-205ENST00000471039 ADGRB1O14514 1584 aa18.06■□□□□ 0.48
SCNM1-205ENST00000471039 TMEM94Q12767 1356 aa18.05■□□□□ 0.48
SCNM1-205ENST00000471039 TRPM1Q7Z4N2 1603 aa18.05■□□□□ 0.48
SCNM1-205ENST00000471039 ARHGEF28Q8N1W1 1705 aaKnown RBP18.04■□□□□ 0.48
SCNM1-205ENST00000471039 TECPR2O15040 1411 aa18.03■□□□□ 0.48
SCNM1-205ENST00000471039 DCAF11Q8TEB1 546 aa18.02■□□□□ 0.48
SCNM1-205ENST00000471039 SIN3AQ96ST3 1273 aa18.02■□□□□ 0.48
SCNM1-205ENST00000471039 NCOA3Q9Y6Q9 1424 aa18.01■□□□□ 0.47
SCNM1-205ENST00000471039 FBXO41Q8TF61 875 aa18.01■□□□□ 0.47
SCNM1-205ENST00000471039 AMOTL2Q9Y2J4 779 aa18.01■□□□□ 0.47
SCNM1-205ENST00000471039 YTHDC2Q9H6S0 1430 aaKnown RBP17.99■□□□□ 0.47
SCNM1-205ENST00000471039 PROSER2Q86WR7 435 aaPredicted RBP17.99■□□□□ 0.47
SCNM1-205ENST00000471039 DLC1Q96QB1 1528 aa17.98■□□□□ 0.47
SCNM1-205ENST00000471039 RBM33Q96EV2 1170 aaKnown RBP17.98■□□□□ 0.47
SCNM1-205ENST00000471039 STAC3Q96MF2 364 aa17.98■□□□□ 0.47
SCNM1-205ENST00000471039 LRPPRCP42704 1394 aaKnown RBP17.98■□□□□ 0.47
SCNM1-205ENST00000471039 ROBO2Q9HCK4 1378 aa17.98■□□□□ 0.47
SCNM1-205ENST00000471039 ADGRL3Q9HAR2 1447 aa17.98■□□□□ 0.47
SCNM1-205ENST00000471039 ROBO1Q9Y6N7 1651 aa17.97■□□□□ 0.47
SCNM1-205ENST00000471039 CDC42BPGQ6DT37 1551 aa17.97■□□□□ 0.47
SCNM1-205ENST00000471039 MSH6P52701 1360 aa17.97■□□□□ 0.47
SCNM1-205ENST00000471039 C14orf93Q9H972 538 aaKnown RBP17.97■□□□□ 0.47
SCNM1-205ENST00000471039 KDM2AQ9Y2K7 1162 aa17.97■□□□□ 0.47
SCNM1-205ENST00000471039 DCCP43146 1447 aa17.97■□□□□ 0.47
SCNM1-205ENST00000471039 NEUROD1Q13562 356 aa17.96■□□□□ 0.47
SCNM1-205ENST00000471039 CFAP70Q5T0N1 1121 aa17.96■□□□□ 0.47
SCNM1-205ENST00000471039 UBAP1LF5GYI3 381 aa17.94■□□□□ 0.46
SCNM1-205ENST00000471039 ILDR1Q86SU0 546 aaPredicted RBP17.94■□□□□ 0.46
SCNM1-205ENST00000471039 L3MBTL2Q969R5 705 aa17.94■□□□□ 0.46
SCNM1-205ENST00000471039 FMN2Q9NZ56 1722 aa17.94■□□□□ 0.46
SCNM1-205ENST00000471039 TONSLQ96HA7 1378 aa17.93■□□□□ 0.46
SCNM1-205ENST00000471039 ABCC11Q96J66 1382 aa17.93■□□□□ 0.46
SCNM1-205ENST00000471039 ADGRB2O60241 1585 aa17.93■□□□□ 0.46
SCNM1-205ENST00000471039 TMEM132EQ6IEE7 984 aa17.93■□□□□ 0.46
SCNM1-205ENST00000471039 FAM135BQ49AJ0 1406 aa17.92■□□□□ 0.46
SCNM1-205ENST00000471039 CLSPNQ9HAW4 1339 aa17.91■□□□□ 0.46
SCNM1-205ENST00000471039 QRICH2Q9H0J4 1663 aa17.9■□□□□ 0.46
SCNM1-205ENST00000471039 TOM1O60784 492 aa17.9■□□□□ 0.46
SCNM1-205ENST00000471039 C14orf37Q86TY3 774 aa17.89■□□□□ 0.45
SCNM1-205ENST00000471039 PLEKHH1Q9ULM0 1364 aa17.89■□□□□ 0.45
SCNM1-205ENST00000471039 NHSL1Q5SYE7 1610 aa17.88■□□□□ 0.45
SCNM1-205ENST00000471039 STK26Q9P289 416 aa17.88■□□□□ 0.45
SCNM1-205ENST00000471039 MST1RQ04912 1400 aa17.88■□□□□ 0.45
SCNM1-205ENST00000471039 RALGAPBQ86X10 1494 aa17.88■□□□□ 0.45
SCNM1-205ENST00000471039 RGPD8O14715 1765 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms