RNA–Protein interactions for RNA: ENST00000471014.1

CTNNB1-212, Transcript of catenin beta 1, humanhuman

TSL 3

Gene CTNNB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-212ENST00000471014 PPARGC1BQ86YN6 1023 aaKnown RBP19.77■□□□□ 0.76
CTNNB1-212ENST00000471014 TET3O43151 1660 aa19.75■□□□□ 0.75
CTNNB1-212ENST00000471014 RPRD2Q5VT52 1461 aaKnown RBP19.74■□□□□ 0.75
CTNNB1-212ENST00000471014 NUTM2DQ5VT03 806 aaPredicted RBP19.72■□□□□ 0.75
CTNNB1-212ENST00000471014 RIMS2Q9UQ26 1411 aa19.72■□□□□ 0.75
CTNNB1-212ENST00000471014 GCC2Q8IWJ2 1684 aa19.71■□□□□ 0.75
CTNNB1-212ENST00000471014 UNC13BO14795 1591 aa19.7■□□□□ 0.74
CTNNB1-212ENST00000471014 MYO5BQ9ULV0 1848 aa19.69■□□□□ 0.74
CTNNB1-212ENST00000471014 ZFYVE9O95405 1425 aa19.69■□□□□ 0.74
CTNNB1-212ENST00000471014 FAM135BQ49AJ0 1406 aa19.68■□□□□ 0.74
CTNNB1-212ENST00000471014 NKTRP30414 1462 aaKnown RBP19.68■□□□□ 0.74
CTNNB1-212ENST00000471014 PLEKHG1Q9ULL1 1385 aa19.68■□□□□ 0.74
CTNNB1-212ENST00000471014 NWD1Q149M9 1564 aa19.67■□□□□ 0.74
CTNNB1-212ENST00000471014 HDGFP51858 240 aaKnown RBP19.67■□□□□ 0.74
CTNNB1-212ENST00000471014 MSH6P52701 1360 aa19.67■□□□□ 0.74
CTNNB1-212ENST00000471014 ROCK1Q13464 1354 aa19.67■□□□□ 0.74
CTNNB1-212ENST00000471014 TMEM131LA2VDJ0 1609 aa19.66■□□□□ 0.74
CTNNB1-212ENST00000471014 E9PCH4 1651 aa19.66■□□□□ 0.74
CTNNB1-212ENST00000471014 NUP155O75694 1391 aa19.66■□□□□ 0.74
CTNNB1-212ENST00000471014 ROBO1Q9Y6N7 1651 aa19.65■□□□□ 0.74
CTNNB1-212ENST00000471014 C14orf37Q86TY3 774 aa19.64■□□□□ 0.73
CTNNB1-212ENST00000471014 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.63■□□□□ 0.73
CTNNB1-212ENST00000471014 IQGAP3Q86VI3 1631 aa19.62■□□□□ 0.73
CTNNB1-212ENST00000471014 RGS17Q9UGC6 210 aaPredicted RBP19.62■□□□□ 0.73
CTNNB1-212ENST00000471014 SLAIN2Q9P270 581 aa19.6■□□□□ 0.73
CTNNB1-212ENST00000471014 TBX22Q9Y458 520 aa19.6■□□□□ 0.73
CTNNB1-212ENST00000471014 ADAMTS13Q76LX8 1427 aa19.59■□□□□ 0.73
CTNNB1-212ENST00000471014 CHD2O14647 1828 aaKnown RBP19.58■□□□□ 0.73
CTNNB1-212ENST00000471014 ZNF326Q5BKZ1 582 aaKnown RBP19.55■□□□□ 0.72
CTNNB1-212ENST00000471014 PHLPP1O60346 1717 aa19.54■□□□□ 0.72
CTNNB1-212ENST00000471014 POTEAQ6S8J7 498 aa19.53■□□□□ 0.72
CTNNB1-212ENST00000471014 AMOTL2Q9Y2J4 779 aa19.52■□□□□ 0.72
CTNNB1-212ENST00000471014 DIP2AQ14689 1571 aa19.52■□□□□ 0.71
CTNNB1-212ENST00000471014 ATF3P18847 181 aa19.51■□□□□ 0.71
CTNNB1-212ENST00000471014 TRPM2O94759 1503 aa19.51■□□□□ 0.71
CTNNB1-212ENST00000471014 PIK3R4Q99570 1358 aa19.5■□□□□ 0.71
CTNNB1-212ENST00000471014 JCADQ9P266 1359 aa19.5■□□□□ 0.71
CTNNB1-212ENST00000471014 PTPRUQ92729 1446 aa19.5■□□□□ 0.71
CTNNB1-212ENST00000471014 CADPS2Q86UW7 1296 aa19.49■□□□□ 0.71
CTNNB1-212ENST00000471014 C19orf44Q9H6X5 657 aa19.49■□□□□ 0.71
CTNNB1-212ENST00000471014 NCOA3Q9Y6Q9 1424 aa19.49■□□□□ 0.71
CTNNB1-212ENST00000471014 SPHKAPQ2M3C7 1700 aa19.48■□□□□ 0.71
CTNNB1-212ENST00000471014 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.47■□□□□ 0.71
CTNNB1-212ENST00000471014 COL16A1Q07092 1604 aaPredicted RBP19.46■□□□□ 0.71
CTNNB1-212ENST00000471014 MEX3CQ5U5Q3 659 aaKnown RBP19.44■□□□□ 0.7
CTNNB1-212ENST00000471014 NRXN3Q9Y4C0 1643 aa19.43■□□□□ 0.7
CTNNB1-212ENST00000471014 TRIM52Q96A61 297 aa19.43■□□□□ 0.7
CTNNB1-212ENST00000471014 METP08581 1390 aa19.43■□□□□ 0.7
CTNNB1-212ENST00000471014 RRBP1Q9P2E9 1410 aaKnown RBP19.42■□□□□ 0.7
CTNNB1-212ENST00000471014 SETBP1Q9Y6X0 1596 aa19.42■□□□□ 0.7
CTNNB1-212ENST00000471014 BRINP3Q76B58 766 aa19.42■□□□□ 0.7
CTNNB1-212ENST00000471014 CLTCL1P53675 1640 aa19.42■□□□□ 0.7
CTNNB1-212ENST00000471014 NAIPQ13075 1403 aa19.42■□□□□ 0.7
CTNNB1-212ENST00000471014 LRP6O75581 1613 aa19.4■□□□□ 0.7
CTNNB1-212ENST00000471014 XRN1Q8IZH2 1706 aaKnown RBP19.39■□□□□ 0.7
CTNNB1-212ENST00000471014 NUTM2BA6NNL0 878 aaPredicted RBP19.39■□□□□ 0.69
CTNNB1-212ENST00000471014 NUTM2EB1AL46 878 aaPredicted RBP19.39■□□□□ 0.69
CTNNB1-212ENST00000471014 NUTM2AQ8IVF1 878 aaPredicted RBP19.39■□□□□ 0.69
CTNNB1-212ENST00000471014 SPATA31A6Q5VVP1 1343 aa19.39■□□□□ 0.69
CTNNB1-212ENST00000471014 AHDC1Q5TGY3 1603 aaPredicted RBP19.39■□□□□ 0.69
CTNNB1-212ENST00000471014 NEXMIFQ5QGS0 1516 aa19.38■□□□□ 0.69
CTNNB1-212ENST00000471014 DCCP43146 1447 aa19.36■□□□□ 0.69
CTNNB1-212ENST00000471014 SETD1AO15047 1707 aaKnown RBP19.36■□□□□ 0.69
CTNNB1-212ENST00000471014 ASXL1Q8IXJ9 1541 aa19.35■□□□□ 0.69
CTNNB1-212ENST00000471014 MST1RQ04912 1400 aa19.34■□□□□ 0.69
CTNNB1-212ENST00000471014 DDX17Q92841 729 aaKnown RBP19.34■□□□□ 0.69
CTNNB1-212ENST00000471014 SLC4A1APQ9BWU0 796 aaKnown RBP19.34■□□□□ 0.69
CTNNB1-212ENST00000471014 KIF1BO60333 1816 aa19.33■□□□□ 0.69
CTNNB1-212ENST00000471014 SHPRHQ149N8 1683 aa19.33■□□□□ 0.68
CTNNB1-212ENST00000471014 ADGRL3Q9HAR2 1447 aa19.33■□□□□ 0.68
CTNNB1-212ENST00000471014 ZNF772Q68DY9 489 aaPredicted RBP19.31■□□□□ 0.68
CTNNB1-212ENST00000471014 HFM1A2PYH4 1435 aa19.31■□□□□ 0.68
CTNNB1-212ENST00000471014 VGFO15240 615 aaPredicted RBP19.3■□□□□ 0.68
CTNNB1-212ENST00000471014 FOXD1Q16676 465 aa19.3■□□□□ 0.68
CTNNB1-212ENST00000471014 NALCNQ8IZF0 1738 aa19.28■□□□□ 0.68
CTNNB1-212ENST00000471014 LRRC59Q96AG4 307 aaKnown RBP19.27■□□□□ 0.68
CTNNB1-212ENST00000471014 ROBO2Q9HCK4 1378 aa19.27■□□□□ 0.68
CTNNB1-212ENST00000471014 SETD5Q9C0A6 1442 aa19.26■□□□□ 0.67
CTNNB1-212ENST00000471014 NHSL1Q5SYE7 1610 aa19.25■□□□□ 0.67
CTNNB1-212ENST00000471014 AFF2P51816 1311 aa19.25■□□□□ 0.67
CTNNB1-212ENST00000471014 C1orf167Q5SNV9 1468 aa19.24■□□□□ 0.67
CTNNB1-212ENST00000471014 RXRBP28702 533 aa19.24■□□□□ 0.67
CTNNB1-212ENST00000471014 C8orf37Q96NL8 207 aa19.24■□□□□ 0.67
CTNNB1-212ENST00000471014 PTCH1Q13635 1447 aa19.24■□□□□ 0.67
CTNNB1-212ENST00000471014 RPGRIP1LQ68CZ1 1315 aa19.24■□□□□ 0.67
CTNNB1-212ENST00000471014 PNPLA6Q8IY17 1366 aa19.22■□□□□ 0.67
CTNNB1-212ENST00000471014 RGL3Q3MIN7 710 aa19.22■□□□□ 0.67
CTNNB1-212ENST00000471014 ORAI2Q96SN7 254 aa19.22■□□□□ 0.67
CTNNB1-212ENST00000471014 ADAMTS2O95450 1211 aa19.2■□□□□ 0.66
CTNNB1-212ENST00000471014 PPLO60437 1756 aa19.19■□□□□ 0.66
CTNNB1-212ENST00000471014 STK26Q9P289 416 aa19.19■□□□□ 0.66
CTNNB1-212ENST00000471014 ADGRF5Q8IZF2 1346 aa19.19■□□□□ 0.66
CTNNB1-212ENST00000471014 CCDC144AA2RUR9 1427 aa19.18■□□□□ 0.66
CTNNB1-212ENST00000471014 UPF1Q92900 1129 aaKnown RBP eCLIP19.17■□□□□ 0.66
CTNNB1-212ENST00000471014 NUTM2FA1L443 756 aa19.15■□□□□ 0.66
CTNNB1-212ENST00000471014 ESCO1Q5FWF5 840 aa19.15■□□□□ 0.66
CTNNB1-212ENST00000471014 NGLY1Q96IV0 654 aa19.15■□□□□ 0.66
CTNNB1-212ENST00000471014 MPHOSPH9Q99550 1183 aa19.15■□□□□ 0.66
CTNNB1-212ENST00000471014 QTRT2Q9H974 415 aaKnown RBP19.15■□□□□ 0.66
CTNNB1-212ENST00000471014 SOS2Q07890 1332 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms