RNA–Protein interactions for RNA: ENST00000470983.5

DNMT3A-209, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-209ENST00000470983 SLC52A1Q9NWF4 448 aa22.54■■□□□ 1.2
DNMT3A-209ENST00000470983 SETD5Q9C0A6 1442 aa22.53■■□□□ 1.2
DNMT3A-209ENST00000470983 TMEM131LA2VDJ0 1609 aa22.53■■□□□ 1.2
DNMT3A-209ENST00000470983 TMEM2Q9UHN6 1383 aa22.5■■□□□ 1.19
DNMT3A-209ENST00000470983 CLTCL1P53675 1640 aa22.49■■□□□ 1.19
DNMT3A-209ENST00000470983 CHGAP10645 457 aaKnown RBP22.48■■□□□ 1.19
DNMT3A-209ENST00000470983 LTKP29376 864 aa22.48■■□□□ 1.19
DNMT3A-209ENST00000470983 SLC4A1APQ9BWU0 796 aaKnown RBP22.48■■□□□ 1.19
DNMT3A-209ENST00000470983 RAB3GAP2Q9H2M9 1393 aa22.48■■□□□ 1.19
DNMT3A-209ENST00000470983 TRPM2O94759 1503 aa22.47■■□□□ 1.19
DNMT3A-209ENST00000470983 FOXD1Q16676 465 aa22.43■■□□□ 1.18
DNMT3A-209ENST00000470983 ALKQ9UM73 1620 aa22.42■■□□□ 1.18
DNMT3A-209ENST00000470983 ZFYVE9O95405 1425 aa22.41■■□□□ 1.18
DNMT3A-209ENST00000470983 RIMS2Q9UQ26 1411 aa22.41■■□□□ 1.18
DNMT3A-209ENST00000470983 KIF1BO60333 1816 aa22.41■■□□□ 1.18
DNMT3A-209ENST00000470983 KCNA6P17658 529 aa22.41■■□□□ 1.18
DNMT3A-209ENST00000470983 HDGFP51858 240 aaKnown RBP22.41■■□□□ 1.18
DNMT3A-209ENST00000470983 FAM135BQ49AJ0 1406 aa22.4■■□□□ 1.18
DNMT3A-209ENST00000470983 MPHOSPH9Q99550 1183 aa22.4■■□□□ 1.18
DNMT3A-209ENST00000470983 SENP3Q9H4L4 574 aaPredicted RBP22.4■■□□□ 1.18
DNMT3A-209ENST00000470983 STRCP1A6NGW2 1772 aa22.39■■□□□ 1.17
DNMT3A-209ENST00000470983 PROSER2Q86WR7 435 aaPredicted RBP22.37■■□□□ 1.17
DNMT3A-209ENST00000470983 NUTM2DQ5VT03 806 aaPredicted RBP22.36■■□□□ 1.17
DNMT3A-209ENST00000470983 BCANQ96GW7 911 aa22.35■■□□□ 1.17
DNMT3A-209ENST00000470983 PPP1R15AO75807 674 aaPredicted RBP22.34■■□□□ 1.17
DNMT3A-209ENST00000470983 TMEM94Q12767 1356 aa22.34■■□□□ 1.17
DNMT3A-209ENST00000470983 ACIN1Q9UKV3 1341 aaKnown RBP22.31■■□□□ 1.16
DNMT3A-209ENST00000470983 PLEKHG1Q9ULL1 1385 aa22.31■■□□□ 1.16
DNMT3A-209ENST00000470983 ZNF326Q5BKZ1 582 aaKnown RBP22.31■■□□□ 1.16
DNMT3A-209ENST00000470983 SLC26A8Q96RN1 970 aa22.31■■□□□ 1.16
DNMT3A-209ENST00000470983 NEXMIFQ5QGS0 1516 aa22.3■■□□□ 1.16
DNMT3A-209ENST00000470983 MSH6P52701 1360 aa22.29■■□□□ 1.16
DNMT3A-209ENST00000470983 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.29■■□□□ 1.16
DNMT3A-209ENST00000470983 CCDC144AA2RUR9 1427 aa22.28■■□□□ 1.16
DNMT3A-209ENST00000470983 NKTRP30414 1462 aaKnown RBP22.28■■□□□ 1.16
DNMT3A-209ENST00000470983 NRXN3Q9Y4C0 1643 aa22.25■■□□□ 1.15
DNMT3A-209ENST00000470983 PPLO60437 1756 aa22.25■■□□□ 1.15
DNMT3A-209ENST00000470983 HRCP23327 699 aa22.24■■□□□ 1.15
DNMT3A-209ENST00000470983 SLAIN2Q9P270 581 aa22.24■■□□□ 1.15
DNMT3A-209ENST00000470983 ADAMTS13Q76LX8 1427 aa22.23■■□□□ 1.15
DNMT3A-209ENST00000470983 RGS17Q9UGC6 210 aaPredicted RBP22.23■■□□□ 1.15
DNMT3A-209ENST00000470983 XIRP1Q702N8 1843 aaKnown RBP22.22■■□□□ 1.15
DNMT3A-209ENST00000470983 NWD1Q149M9 1564 aa22.22■■□□□ 1.15
DNMT3A-209ENST00000470983 CHD2O14647 1828 aaKnown RBP22.22■■□□□ 1.15
DNMT3A-209ENST00000470983 DIP2AQ14689 1571 aa22.21■■□□□ 1.15
DNMT3A-209ENST00000470983 NCOA3Q9Y6Q9 1424 aa22.21■■□□□ 1.15
DNMT3A-209ENST00000470983 SETBP1Q9Y6X0 1596 aa22.21■■□□□ 1.15
DNMT3A-209ENST00000470983 TBX22Q9Y458 520 aa22.2■■□□□ 1.14
DNMT3A-209ENST00000470983 SPATA31E1Q6ZUB1 1445 aa22.2■■□□□ 1.14
DNMT3A-209ENST00000470983 IFT172Q9UG01 1749 aa22.2■■□□□ 1.14
DNMT3A-209ENST00000470983 JCADQ9P266 1359 aa22.17■■□□□ 1.14
DNMT3A-209ENST00000470983 RGL3Q3MIN7 710 aa22.17■■□□□ 1.14
DNMT3A-209ENST00000470983 ANKRD30BQ9BXX2 1392 aa22.16■■□□□ 1.14
DNMT3A-209ENST00000470983 C14orf37Q86TY3 774 aa22.16■■□□□ 1.14
DNMT3A-209ENST00000470983 CADPS2Q86UW7 1296 aa22.15■■□□□ 1.14
DNMT3A-209ENST00000470983 RBM33Q96EV2 1170 aaKnown RBP22.15■■□□□ 1.14
DNMT3A-209ENST00000470983 RPGRIP1LQ68CZ1 1315 aa22.14■■□□□ 1.14
DNMT3A-209ENST00000470983 SETD1AO15047 1707 aaKnown RBP22.14■■□□□ 1.13
DNMT3A-209ENST00000470983 ROBO1Q9Y6N7 1651 aa22.14■■□□□ 1.13
DNMT3A-209ENST00000470983 PIK3R4Q99570 1358 aa22.13■■□□□ 1.13
DNMT3A-209ENST00000470983 POTEAQ6S8J7 498 aa22.13■■□□□ 1.13
DNMT3A-209ENST00000470983 ATF3P18847 181 aa22.12■■□□□ 1.13
DNMT3A-209ENST00000470983 TRIM26Q12899 539 aaPredicted RBP22.12■■□□□ 1.13
DNMT3A-209ENST00000470983 C19orf44Q9H6X5 657 aa22.12■■□□□ 1.13
DNMT3A-209ENST00000470983 SPATA31A6Q5VVP1 1343 aa22.11■■□□□ 1.13
DNMT3A-209ENST00000470983 VGFO15240 615 aaPredicted RBP22.11■■□□□ 1.13
DNMT3A-209ENST00000470983 PTPRUQ92729 1446 aa22.11■■□□□ 1.13
DNMT3A-209ENST00000470983 XRN1Q8IZH2 1706 aaKnown RBP22.1■■□□□ 1.13
DNMT3A-209ENST00000470983 METP08581 1390 aa22.09■■□□□ 1.13
DNMT3A-209ENST00000470983 ADGRF5Q8IZF2 1346 aa22.07■■□□□ 1.12
DNMT3A-209ENST00000470983 ZNF772Q68DY9 489 aaPredicted RBP22.07■■□□□ 1.12
DNMT3A-209ENST00000470983 MEX3CQ5U5Q3 659 aaKnown RBP22.06■■□□□ 1.12
DNMT3A-209ENST00000470983 AMOTL2Q9Y2J4 779 aa22.05■■□□□ 1.12
DNMT3A-209ENST00000470983 PHLPP1O60346 1717 aa22.02■■□□□ 1.12
DNMT3A-209ENST00000470983 MYOM2P54296 1465 aa22.01■■□□□ 1.11
DNMT3A-209ENST00000470983 PIK3C2GO75747 1445 aa22■■□□□ 1.11
DNMT3A-209ENST00000470983 ASXL1Q8IXJ9 1541 aa21.99■■□□□ 1.11
DNMT3A-209ENST00000470983 NRXN1Q9ULB1 1477 aa21.97■■□□□ 1.11
DNMT3A-209ENST00000470983 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.97■■□□□ 1.11
DNMT3A-209ENST00000470983 DCCP43146 1447 aa21.97■■□□□ 1.11
DNMT3A-209ENST00000470983 DHX57Q6P158 1386 aaKnown RBP21.96■■□□□ 1.11
DNMT3A-209ENST00000470983 LAMC1P11047 1609 aa21.95■■□□□ 1.1
DNMT3A-209ENST00000470983 KDM2AQ9Y2K7 1162 aa21.94■■□□□ 1.1
DNMT3A-209ENST00000470983 NALCNQ8IZF0 1738 aa21.94■■□□□ 1.1
DNMT3A-209ENST00000470983 COL16A1Q07092 1604 aaPredicted RBP21.93■■□□□ 1.1
DNMT3A-209ENST00000470983 AHDC1Q5TGY3 1603 aaPredicted RBP21.92■■□□□ 1.1
DNMT3A-209ENST00000470983 RXRBP28702 533 aa21.92■■□□□ 1.1
DNMT3A-209ENST00000470983 BRINP3Q76B58 766 aa21.92■■□□□ 1.1
DNMT3A-209ENST00000470983 DCAF11Q8TEB1 546 aa21.92■■□□□ 1.1
DNMT3A-209ENST00000470983 PTCH1Q13635 1447 aa21.91■■□□□ 1.1
DNMT3A-209ENST00000470983 ROBO2Q9HCK4 1378 aa21.91■■□□□ 1.1
DNMT3A-209ENST00000470983 TMEM132EQ6IEE7 984 aa21.91■■□□□ 1.1
DNMT3A-209ENST00000470983 LRRC59Q96AG4 307 aaKnown RBP21.91■■□□□ 1.1
DNMT3A-209ENST00000470983 KNDC1Q76NI1 1749 aa21.91■■□□□ 1.1
DNMT3A-209ENST00000470983 CFAP70Q5T0N1 1121 aa21.9■■□□□ 1.1
DNMT3A-209ENST00000470983 PRAG1Q86YV5 1406 aa21.89■■□□□ 1.1
DNMT3A-209ENST00000470983 SIN3AQ96ST3 1273 aa21.89■■□□□ 1.09
DNMT3A-209ENST00000470983 C14orf93Q9H972 538 aaKnown RBP21.88■■□□□ 1.09
DNMT3A-209ENST00000470983 STK26Q9P289 416 aa21.88■■□□□ 1.09
DNMT3A-209ENST00000470983 ADGRL3Q9HAR2 1447 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms