RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 NOS1P29475 1434 aa10.8□□□□□ -0.68
SF3A3-205ENST00000470585 SPATA31A6Q5VVP1 1343 aa10.8□□□□□ -0.68
SF3A3-205ENST00000470585 CROCC2H7BZ55 1655 aa10.79□□□□□ -0.68
SF3A3-205ENST00000470585 ADGRB3O60242 1522 aa10.79□□□□□ -0.68
SF3A3-205ENST00000470585 HDGFP51858 240 aaKnown RBP10.79□□□□□ -0.68
SF3A3-205ENST00000470585 PROSER2Q86WR7 435 aaPredicted RBP10.79□□□□□ -0.68
SF3A3-205ENST00000470585 STAG3Q9UJ98 1225 aa10.79□□□□□ -0.68
SF3A3-205ENST00000470585 ZNF772Q68DY9 489 aaPredicted RBP10.78□□□□□ -0.68
SF3A3-205ENST00000470585 SLAIN2Q9P270 581 aa10.78□□□□□ -0.68
SF3A3-205ENST00000470585 CDK12Q9NYV4 1490 aaPredicted RBP10.78□□□□□ -0.68
SF3A3-205ENST00000470585 PHLPP1O60346 1717 aa10.77□□□□□ -0.69
SF3A3-205ENST00000470585 PIK3R4Q99570 1358 aa10.77□□□□□ -0.69
SF3A3-205ENST00000470585 PLEKHG1Q9ULL1 1385 aa10.77□□□□□ -0.69
SF3A3-205ENST00000470585 IDI1Q13907 227 aa10.76□□□□□ -0.69
SF3A3-205ENST00000470585 COL16A1Q07092 1604 aaPredicted RBP10.76□□□□□ -0.69
SF3A3-205ENST00000470585 AHDC1Q5TGY3 1603 aaPredicted RBP10.76□□□□□ -0.69
SF3A3-205ENST00000470585 ANKRD30AQ9BXX3 1397 aa10.76□□□□□ -0.69
SF3A3-205ENST00000470585 ABCC5O15440 1437 aa10.75□□□□□ -0.69
SF3A3-205ENST00000470585 CHD2O14647 1828 aaKnown RBP10.75□□□□□ -0.69
SF3A3-205ENST00000470585 DIP2AQ14689 1571 aa10.75□□□□□ -0.69
SF3A3-205ENST00000470585 ZFYVE9O95405 1425 aa10.75□□□□□ -0.69
SF3A3-205ENST00000470585 SHPRHQ149N8 1683 aa10.74□□□□□ -0.69
SF3A3-205ENST00000470585 TBX22Q9Y458 520 aa10.74□□□□□ -0.69
SF3A3-205ENST00000470585 DCCP43146 1447 aa10.74□□□□□ -0.69
SF3A3-205ENST00000470585 DAPK1P53355 1430 aa10.74□□□□□ -0.69
SF3A3-205ENST00000470585 CADPS2Q86UW7 1296 aa10.73□□□□□ -0.69
SF3A3-205ENST00000470585 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.73□□□□□ -0.69
SF3A3-205ENST00000470585 SLC26A8Q96RN1 970 aa10.72□□□□□ -0.69
SF3A3-205ENST00000470585 ADGRL2O95490 1459 aa10.72□□□□□ -0.69
SF3A3-205ENST00000470585 PTPN23Q9H3S7 1636 aa10.72□□□□□ -0.69
SF3A3-205ENST00000470585 UPF1Q92900 1129 aaKnown RBP eCLIP10.71□□□□□ -0.69
SF3A3-205ENST00000470585 C19orf44Q9H6X5 657 aa10.71□□□□□ -0.69
SF3A3-205ENST00000470585 RRP7BPQ9NSQ0 103 aa10.71□□□□□ -0.69
SF3A3-205ENST00000470585 SETD1AO15047 1707 aaKnown RBP10.7□□□□□ -0.7
SF3A3-205ENST00000470585 RIMS2Q9UQ26 1411 aa10.69□□□□□ -0.7
SF3A3-205ENST00000470585 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.69□□□□□ -0.76e-7■■■□□ 18.6
SF3A3-205ENST00000470585 LRP6O75581 1613 aa10.69□□□□□ -0.7
SF3A3-205ENST00000470585 RXRBP28702 533 aa10.68□□□□□ -0.7
SF3A3-205ENST00000470585 KANK4Q5T7N3 995 aaPredicted RBP10.68□□□□□ -0.7
SF3A3-205ENST00000470585 TMEM131LA2VDJ0 1609 aa10.68□□□□□ -0.7
SF3A3-205ENST00000470585 SETD5Q9C0A6 1442 aa10.67□□□□□ -0.7
SF3A3-205ENST00000470585 ATF3P18847 181 aa10.67□□□□□ -0.7
SF3A3-205ENST00000470585 MEX3CQ5U5Q3 659 aaKnown RBP10.67□□□□□ -0.7
SF3A3-205ENST00000470585 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.67□□□□□ -0.7
SF3A3-205ENST00000470585 GCC2Q8IWJ2 1684 aa10.66□□□□□ -0.7
SF3A3-205ENST00000470585 PPP1R15AO75807 674 aaPredicted RBP10.66□□□□□ -0.7
SF3A3-205ENST00000470585 BCANQ96GW7 911 aa10.66□□□□□ -0.7
SF3A3-205ENST00000470585 TRPM2O94759 1503 aa10.66□□□□□ -0.7
SF3A3-205ENST00000470585 ADAMTS13Q76LX8 1427 aa10.66□□□□□ -0.7
SF3A3-205ENST00000470585 ANKRD50Q9ULJ7 1429 aa10.65□□□□□ -0.7
SF3A3-205ENST00000470585 MYO5BQ9ULV0 1848 aa10.63□□□□□ -0.71
SF3A3-205ENST00000470585 APLP2Q06481 763 aa10.63□□□□□ -0.71
SF3A3-205ENST00000470585 BRINP3Q76B58 766 aa10.63□□□□□ -0.71
SF3A3-205ENST00000470585 C14orf37Q86TY3 774 aa10.63□□□□□ -0.71
SF3A3-205ENST00000470585 RBM33Q96EV2 1170 aaKnown RBP10.63□□□□□ -0.71
SF3A3-205ENST00000470585 UNC13BO14795 1591 aa10.62□□□□□ -0.71
SF3A3-205ENST00000470585 LRRC59Q96AG4 307 aaKnown RBP10.62□□□□□ -0.71
SF3A3-205ENST00000470585 ASXL1Q8IXJ9 1541 aa10.62□□□□□ -0.71
SF3A3-205ENST00000470585 NHSL1Q5SYE7 1610 aa10.62□□□□□ -0.71
SF3A3-205ENST00000470585 SRCAPQ6ZRS2 3230 aa10.62□□□□□ -0.71
SF3A3-205ENST00000470585 RBM6P78332 1123 aaKnown RBP10.61□□□□□ -0.71
SF3A3-205ENST00000470585 XRN1Q8IZH2 1706 aaKnown RBP10.61□□□□□ -0.71
SF3A3-205ENST00000470585 SETBP1Q9Y6X0 1596 aa10.6□□□□□ -0.71
SF3A3-205ENST00000470585 IQGAP3Q86VI3 1631 aa10.6□□□□□ -0.71
SF3A3-205ENST00000470585 TRIM52Q96A61 297 aa10.6□□□□□ -0.71
SF3A3-205ENST00000470585 AFF2P51816 1311 aa10.59□□□□□ -0.71
SF3A3-205ENST00000470585 MST1RQ04912 1400 aa10.59□□□□□ -0.71
SF3A3-205ENST00000470585 LAMC1P11047 1609 aa10.59□□□□□ -0.71
SF3A3-205ENST00000470585 NGLY1Q96IV0 654 aa10.59□□□□□ -0.71
SF3A3-205ENST00000470585 AMOTL2Q9Y2J4 779 aa10.59□□□□□ -0.71
SF3A3-205ENST00000470585 ROCK1Q13464 1354 aa10.59□□□□□ -0.71
SF3A3-205ENST00000470585 ATAD2Q6PL18 1390 aa10.58□□□□□ -0.72
SF3A3-205ENST00000470585 CHIC2Q9UKJ5 165 aa10.58□□□□□ -0.72
SF3A3-205ENST00000470585 RGS12O14924 1447 aa10.58□□□□□ -0.72
SF3A3-205ENST00000470585 ADGRL3Q9HAR2 1447 aa10.58□□□□□ -0.72
SF3A3-205ENST00000470585 PNPLA6Q8IY17 1366 aa10.57□□□□□ -0.72
SF3A3-205ENST00000470585 CCDC125Q86Z20 511 aa10.57□□□□□ -0.72
SF3A3-205ENST00000470585 PRAG1Q86YV5 1406 aa10.57□□□□□ -0.72
SF3A3-205ENST00000470585 PTPRUQ92729 1446 aa10.57□□□□□ -0.72
SF3A3-205ENST00000470585 E9PCH4 1651 aa10.57□□□□□ -0.72
SF3A3-205ENST00000470585 PTCH1Q13635 1447 aa10.56□□□□□ -0.72
SF3A3-205ENST00000470585 QTRT2Q9H974 415 aaKnown RBP10.55□□□□□ -0.72
SF3A3-205ENST00000470585 NRXN3Q9Y4C0 1643 aa10.55□□□□□ -0.72
SF3A3-205ENST00000470585 NUTM2BA6NNL0 878 aaPredicted RBP10.53□□□□□ -0.72
SF3A3-205ENST00000470585 NUTM2EB1AL46 878 aaPredicted RBP10.53□□□□□ -0.72
SF3A3-205ENST00000470585 NUTM2AQ8IVF1 878 aaPredicted RBP10.53□□□□□ -0.72
SF3A3-205ENST00000470585 CHGAP10645 457 aaKnown RBP10.52□□□□□ -0.73
SF3A3-205ENST00000470585 FNBP4Q8N3X1 1017 aaPredicted RBP10.52□□□□□ -0.73
SF3A3-205ENST00000470585 C8orf37Q96NL8 207 aa10.52□□□□□ -0.73
SF3A3-205ENST00000470585 ZRANB1Q9UGI0 708 aa10.52□□□□□ -0.73
SF3A3-205ENST00000470585 TRPC5Q9UL62 973 aaPredicted RBP10.52□□□□□ -0.73
SF3A3-205ENST00000470585 SOS2Q07890 1332 aaPredicted RBP10.52□□□□□ -0.73
SF3A3-205ENST00000470585 COL22A1Q8NFW1 1626 aaPredicted RBP10.51□□□□□ -0.73
SF3A3-205ENST00000470585 ATRNO75882 1429 aa10.5□□□□□ -0.73
SF3A3-205ENST00000470585 C1orf167Q5SNV9 1468 aa10.5□□□□□ -0.73
SF3A3-205ENST00000470585 SPHKAPQ2M3C7 1700 aa10.5□□□□□ -0.73
SF3A3-205ENST00000470585 NALCNQ8IZF0 1738 aa10.5□□□□□ -0.73
SF3A3-205ENST00000470585 EP400Q96L91 3159 aa10.49□□□□□ -0.73
SF3A3-205ENST00000470585 FAM50AQ14320 339 aaKnown RBP10.49□□□□□ -0.73
SF3A3-205ENST00000470585 NUTM2DQ5VT03 806 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms